Basic Information

Insect: Symmerus nobilis
Gene Symbol: Zbtb3
Assembly: GCA_027564815.1
Location: JANTOP010008154.1:1773-3869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.012 0.44 11.2 1.1 1 19 157 175 157 178 0.92

2 14 0.00013 0.0044 17.5 2.2 1 23 209 231 209 231 0.97

3 14 1.2e-05 0.00041 20.7 3.7 1 23 237 260 237 260 0.97

4 14 0.00046 0.016 15.7 3.9 1 23 266 288 266 288 0.98

5 14 1.2e-06 4.4e-05 23.8 1.3 1 23 294 316 294 316 0.99

6 14 0.028 1 10.1 6.0 1 23 322 344 322 344 0.93

7 14 4e-06 0.00014 22.2 0.9 1 23 350 372 350 372 0.98

8 14 2.8e-06 0.0001 22.7 1.7 1 23 378 400 378 400 0.99

9 14 0.00054 0.019 15.5 2.1 1 23 406 429 406 429 0.90

10 14 3.5e-06 0.00012 22.4 1.7 1 23 451 473 451 473 0.97

11 14 0.00015 0.0051 17.3 2.0 1 23 479 502 479 502 0.95

12 14 2.2e-06 7.6e-05 23.0 2.0 1 23 508 530 508 530 0.98

13 14 0.00025 0.009 16.5 3.7 1 23 536 558 536 558 0.98

14 14 0.00088 0.031 14.8 0.7 1 23 564 586 564 586 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.012	0.44	11.2	1.1	1	19	157	175	157	178	0.92
2	14	0.00013	0.0044	17.5	2.2	1	23	209	231	209	231	0.97
3	14	1.2e-05	0.00041	20.7	3.7	1	23	237	260	237	260	0.97
4	14	0.00046	0.016	15.7	3.9	1	23	266	288	266	288	0.98
5	14	1.2e-06	4.4e-05	23.8	1.3	1	23	294	316	294	316	0.99
6	14	0.028	1	10.1	6.0	1	23	322	344	322	344	0.93
7	14	4e-06	0.00014	22.2	0.9	1	23	350	372	350	372	0.98
8	14	2.8e-06	0.0001	22.7	1.7	1	23	378	400	378	400	0.99
9	14	0.00054	0.019	15.5	2.1	1	23	406	429	406	429	0.90
10	14	3.5e-06	0.00012	22.4	1.7	1	23	451	473	451	473	0.97
11	14	0.00015	0.0051	17.3	2.0	1	23	479	502	479	502	0.95
12	14	2.2e-06	7.6e-05	23.0	2.0	1	23	508	530	508	530	0.98
13	14	0.00025	0.009	16.5	3.7	1	23	536	558	536	558	0.98
14	14	0.00088	0.031	14.8	0.7	1	23	564	586	564	586	0.97

Sequence Information

Coding Sequence: ATGGACGAAATGGAACCGGAACTAGTATTTGATTTAGAAAAAACATGCCGAACCTGCCTACACAACATAACCAGCGATCGGAAGCGCATTCATTTATTCCAGGGAAAGGAAACCGATCCGGATTTGGTCGTATCCTACTACGAGGATTTAAAATTATTCAATTTAAATATAGCGGAAAATGATGGTTTGCCCCAACAAATTTGTATCATCTGTTCGACGTTACTGGATGAAATCAATGCATTTCGTCTACGATCCAAACGGTCCCAAGCAATGTTGGAACAGCATTTCAATCAGTTTATTTCAGTAAATCGACAAAGTGACACAGAATGGACTGGCCACAATTCAAATGATGCCGAATTTGAATATTTAATTTTAAATGATCCAATTCAAACGAAGAATTGTCCATCCGGTAATATAAACCCCACGGATGGTAAATTGTTTGAAAAACAAAGTCTCTGTTCCAAAAACCATCCATGCCTCGAGTGCGGAGAGAATTTTACGAATTTAAAAGATCTAAAGGGACATGGTTGTTATGTAGTATCTTCCGATTTAGTTCCAAAGATTCCCGATAAACCCAGAAAACGGAAATCGGATCAATCAAACAAGAATGGGAAGGATAACCTTTATCATTGCGATATATGTGATAAGACATTTGGGAGATTGGATAGTAAAAAACGCCATATGGATTTACATGTTGAAGGCGTTCAACATCAATGCAACGTATGCCAACAGACCTTTAAAACAAAGATTTATTTAATAAAACATCAACGTCGTATCCATACAATAGCGTCGTTACACGTATGTCCCCATTGTCAAGCAAAATTTACTGATCCGAGTCGGTATcaataccatttgaaaacccatgaaaacaacgaccgatataaatgtaccgtttgtgataaaacattcatgcaacaagatggtttaacaaatcatgaacggaaacacaccggtgttaaaccttatctgtgtaattgttgtgggaaagaatttacacaaaaatgtaattttaaacttcatctgggaacgcattcgggtgatcgaccatataaatgtgatatttgtaacaaagatttcatacaacgtggaacatttcggctccatatgcgtgcccattcgggcccgaaaccgtatcaatgtgaacattgtggtaaagatttcctacagaaatcctcattaatcgttcacctacgtacccattcgggtgagaaaccatacaaatgtgtcgattgtgatcggagtttcgttcaagcgcaacaacttaaatATCATTGTAATTCGGCGCATGGTACCCGTGACGAATCCGGTCTATTTCGACGCGTTAAATCATCCGATTGTCGGATGTATTCGTATTGTTGTGCGGTGTGTAATAAAAGTTTCAAAGTACCATCGTCCCTATCCACCCACATGAAAGTACACAGTGAGCCACGGAAACATGTGTGTCAAACGTGTGGACAACAATTTAAGCGGATGGAACATTTACGGATCCATATTAATGGGGTTCACTTGAAACagaaaccattcgaatgtaaattttgtggtaaaacattttcacagtctggtgatcgaaatttacatatgcgacggcatacaaatgagaaaccgcatcaatgtacgtactgccaacgaacgtttcgtttgcaaaaagtgttgcgggcccatttgagactgcataccggtgagaaaccgtattgttgtgaaatttgtaaggaggaatttataacgtatgcagcgttaGCAAATCATACATTAAAGCACGAAGTGGGCAATACGATTTCAATGCCAGTGAAGAGATCACAAGTCAAATTTTGA
Protein Sequence: MDEMEPELVFDLEKTCRTCLHNITSDRKRIHLFQGKETDPDLVVSYYEDLKLFNLNIAENDGLPQQICIICSTLLDEINAFRLRSKRSQAMLEQHFNQFISVNRQSDTEWTGHNSNDAEFEYLILNDPIQTKNCPSGNINPTDGKLFEKQSLCSKNHPCLECGENFTNLKDLKGHGCYVVSSDLVPKIPDKPRKRKSDQSNKNGKDNLYHCDICDKTFGRLDSKKRHMDLHVEGVQHQCNVCQQTFKTKIYLIKHQRRIHTIASLHVCPHCQAKFTDPSRYQYHLKTHENNDRYKCTVCDKTFMQQDGLTNHERKHTGVKPYLCNCCGKEFTQKCNFKLHLGTHSGDRPYKCDICNKDFIQRGTFRLHMRAHSGPKPYQCEHCGKDFLQKSSLIVHLRTHSGEKPYKCVDCDRSFVQAQQLKYHCNSAHGTRDESGLFRRVKSSDCRMYSYCCAVCNKSFKVPSSLSTHMKVHSEPRKHVCQTCGQQFKRMEHLRIHINGVHLKQKPFECKFCGKTFSQSGDRNLHMRRHTNEKPHQCTYCQRTFRLQKVLRAHLRLHTGEKPYCCEICKEEFITYAALANHTLKHEVGNTISMPVKRSQVKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -