Basic Information

Insect: Symmerus nobilis
Gene Symbol: -
Assembly: GCA_027564815.1
Location: JANTOP010038670.1:1240-9366[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0041 0.15 12.7 0.6 2 23 49 71 48 71 0.96

2 31 0.0059 0.21 12.2 1.0 1 23 103 126 103 126 0.94

3 31 0.00095 0.033 14.7 1.9 1 23 133 156 133 156 0.98

4 31 0.001 0.037 14.6 1.5 1 23 163 186 163 186 0.98

5 31 8 2.8e+02 2.4 2.6 3 23 194 215 193 215 0.93

6 31 0.11 3.8 8.3 1.2 2 23 223 244 222 244 0.97

7 31 0.0074 0.26 11.9 0.9 3 23 252 273 250 273 0.96

8 31 0.0052 0.19 12.4 3.2 1 23 279 301 279 301 0.97

9 31 0.009 0.32 11.7 0.5 2 23 470 492 469 492 0.96

10 31 0.00014 0.0049 17.4 0.2 1 23 524 547 524 547 0.96

11 31 2.6 92 3.9 5.6 1 23 552 575 552 575 0.94

12 31 0.00016 0.0058 17.1 1.0 1 23 582 605 582 605 0.96

13 31 0.03 1.1 10.0 3.0 2 23 612 634 611 634 0.90

14 31 0.021 0.76 10.5 0.8 2 23 639 660 638 660 0.97

15 31 0.0023 0.08 13.5 0.9 1 23 694 716 694 716 0.96

16 31 0.011 0.39 11.4 0.6 2 23 800 822 799 822 0.96

17 31 0.041 1.4 9.6 0.6 1 23 854 877 854 877 0.78

18 31 0.0013 0.047 14.3 1.4 1 23 885 908 885 908 0.98

19 31 0.0095 0.34 11.6 4.4 1 23 915 938 915 938 0.96

20 31 0.36 13 6.6 3.0 2 19 949 966 949 971 0.86

21 31 0.01 0.36 11.5 5.4 2 23 977 998 977 998 0.98

22 31 0.38 13 6.5 0.4 1 14 1032 1045 1032 1049 0.85

23 31 0.0028 0.099 13.3 0.4 2 23 1190 1212 1189 1212 0.97

24 31 0.016 0.58 10.8 1.1 1 23 1244 1267 1244 1267 0.91

25 31 0.00088 0.031 14.8 3.6 1 23 1275 1298 1275 1298 0.98

26 31 0.5 18 6.2 2.4 1 23 1305 1328 1305 1328 0.94

27 31 0.028 0.99 10.1 0.3 3 23 1336 1357 1335 1357 0.95

28 31 0.0053 0.19 12.4 0.5 2 23 1365 1386 1364 1386 0.98

29 31 0.034 1.2 9.8 2.7 3 23 1394 1415 1392 1415 0.96

30 31 2.6e-06 9.2e-05 22.8 1.2 1 23 1420 1442 1420 1442 0.97

31 31 7.4e-05 0.0026 18.2 1.1 1 23 1449 1472 1449 1472 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0041	0.15	12.7	0.6	2	23	49	71	48	71	0.96
2	31	0.0059	0.21	12.2	1.0	1	23	103	126	103	126	0.94
3	31	0.00095	0.033	14.7	1.9	1	23	133	156	133	156	0.98
4	31	0.001	0.037	14.6	1.5	1	23	163	186	163	186	0.98
5	31	8	2.8e+02	2.4	2.6	3	23	194	215	193	215	0.93
6	31	0.11	3.8	8.3	1.2	2	23	223	244	222	244	0.97
7	31	0.0074	0.26	11.9	0.9	3	23	252	273	250	273	0.96
8	31	0.0052	0.19	12.4	3.2	1	23	279	301	279	301	0.97
9	31	0.009	0.32	11.7	0.5	2	23	470	492	469	492	0.96
10	31	0.00014	0.0049	17.4	0.2	1	23	524	547	524	547	0.96
11	31	2.6	92	3.9	5.6	1	23	552	575	552	575	0.94
12	31	0.00016	0.0058	17.1	1.0	1	23	582	605	582	605	0.96
13	31	0.03	1.1	10.0	3.0	2	23	612	634	611	634	0.90
14	31	0.021	0.76	10.5	0.8	2	23	639	660	638	660	0.97
15	31	0.0023	0.08	13.5	0.9	1	23	694	716	694	716	0.96
16	31	0.011	0.39	11.4	0.6	2	23	800	822	799	822	0.96
17	31	0.041	1.4	9.6	0.6	1	23	854	877	854	877	0.78
18	31	0.0013	0.047	14.3	1.4	1	23	885	908	885	908	0.98
19	31	0.0095	0.34	11.6	4.4	1	23	915	938	915	938	0.96
20	31	0.36	13	6.6	3.0	2	19	949	966	949	971	0.86
21	31	0.01	0.36	11.5	5.4	2	23	977	998	977	998	0.98
22	31	0.38	13	6.5	0.4	1	14	1032	1045	1032	1049	0.85
23	31	0.0028	0.099	13.3	0.4	2	23	1190	1212	1189	1212	0.97
24	31	0.016	0.58	10.8	1.1	1	23	1244	1267	1244	1267	0.91
25	31	0.00088	0.031	14.8	3.6	1	23	1275	1298	1275	1298	0.98
26	31	0.5	18	6.2	2.4	1	23	1305	1328	1305	1328	0.94
27	31	0.028	0.99	10.1	0.3	3	23	1336	1357	1335	1357	0.95
28	31	0.0053	0.19	12.4	0.5	2	23	1365	1386	1364	1386	0.98
29	31	0.034	1.2	9.8	2.7	3	23	1394	1415	1392	1415	0.96
30	31	2.6e-06	9.2e-05	22.8	1.2	1	23	1420	1442	1420	1442	0.97
31	31	7.4e-05	0.0026	18.2	1.1	1	23	1449	1472	1449	1472	0.98

Sequence Information

Coding Sequence: ATGAAAACTGTCAATTGCGTTCAGTGTGAAAAAGTAAAACGAAGCAAGAACTCCGAAAACGGAAAGAAGGTTTACAAGAAAATTGATTCGCAAACgaaatatggtttagagtataaaaacaaattactagagactttcTCCATGAAATGTGACCATTGCGAACTTAATTTTACTGATTGGGATGAGGCACGGATTCATTACAAGTCCGCACACAATAAAACGGGATATTTAATATGTTGCGATCGGAAATTCTTTACATATGGTCGTGCTATTGAACATGTCATCTGGCACGATAATCCAGATTCATATAAATGTACGATTTGTGATAAATCATTTTTGGATGGATACCGACTACGAAAACATACGAATGAAATTCATAGGGATGATGAACCGATTTTTAAATGTGATAAATGTCCGAGAGAGTATCGGCGACGGAGTACATTGAATTTTCACGTTCGTACGATCCATTCAAAAACGACACGTCAATACGAATGTTATAAATGTGGACAACGATTTGTACAGGCCTGTTCGATTCGGCAACATTTACGAGTCGTTCACGATCAGGGCGATTCCCGAATCTGTGATATTTGCGCGAAATTCTTTAAATGTTCCCAATCATATAATTTACATTATAAATTGTCTCACACCAATGAAGTGACGAAAGTTCAATGTAACATTTGTAAAATATGGTTGAAACATGAATTTATGTTACGGAACCATATGCGGGTTCATCAGCAGAAGGATATACAAATTTGTAAATATTGTGGAAAGGAATCGCCGCATATACGAGCGTTGAGGTCTCATATACAACGGAATCATATGGATATCACCAGATTTCCTTGTCATATTTGTAGTAAACTATGTAAAAATTCAACCAAGTTGAAAgaacacatagccatacatacgggagataattctctATATTCTACGGAAGGCCAACTGTTGTCGGAATCCACCGTTGGGGATGAATCGGTAATTGAAATCGTGAAATTACATTTTCCCTTCGAGTTAAGATTCGATAACGAAGTAAATAAACTCGTTTGCACTGAATGTTTGTTAAAAATACAAAACTTCCATGAATTCTATTTGGAAATACGATTTATTCATTTGAATTTAGAAGTATATGTTAAGAATGAATGGGATATTGATGAAGATACGCAATCAATTAATGTTGAGCTATTAAACAACATTACCAAGTTAACAGAAGACATCAACAACCAATCAATTCCGGATGAAGAACCTGTTGAAGATGAAGCTGAAAATGAAAGAATTGACAAAATACGGATGAGTTCGGAGAACCCAAAGAACGGTAGTGAAATTAAAAAAGCGAAACGTTATAGAAAAGTGACTAGTAAATATCGCTTTCGTTCCGATTATTTCAATAAATTACAACAAACATTCTCTATAAAATGTGATTTATGCGAAACGAATTTTAACAGTTGGACCGAAGTACGGAGTCACTATAAATCGGAACATAATAAAAATGGATATTTAATATGTTGTGGTCATAAATTTCACGATTTCAGACAAATTATTGATCATACAATTTGGCATGGCGATCCAAATGCATATAAATGCACAATTTGTGGTAAAACATTTATGGCCGGGTCGCTTTTACGACGACATGCGAATATAATTCATTCTGAGGTCGTTTTTAAATGTGATAAATGTCCGATGGAGTATCATAGACAACAGTCATTATATCTTCACTGTAAAACGTTACATCCGAAAATTAAACGAGAGTTTGTGTGTTACAAGTGTGGCCGAAATTTTCGTCAAATTCGTACCCTTCAAAAACATTTGGAAATGGTTCATGATCAAGATGATTCTCAAACCTGCCAGATTTGTGGGAGATTCTTTAGAAATGAAAAAACTTATCAAGTACATTGTAGATATATTCATAAACCAAAAGTACAATGTACCGTTTGTCAAGAATGGCTGAGAAATAAGTATACGCTACTGACTCACATGAGAAAACATAGACCGCGAAAACCGCGACCACGTTATTATTGTGAATATGAATCGCCACATATCCGAGCGTTTAGAAATCATGCAAAACGAATGAATATAAACATTTCATTTTCATGTTATATTTGTAAAAAAACGTATAAAAATTGGTTGCTTTTGAGAgaacattttgccattcatacggAAGTTTATGTTAAGAAGGAAGGGGATATTATAATTGACGAAGATATGCCATCAATTGAGGTTGAACCAATAAACAACATTACCGTGTTAACAGAAGACATCAACGGCGAATCAATTCCCGATGTAGAACCTGTCGAAGATGAAGCTGAAAATGAAAGAATTGGAAAAGTACGGAAGAGATTGGGGAACGCAAAGACCGGTAGTGAATCCGATTATCACGATAAATTAAAACAAATATTCTCTATGAAATGTGATTTATGCGAAACGAATTTTAACAGTTGGACCGAAGTACGGAGTCACTATAAATCGGAACATAATAAATATGGATATTTAACATGTTGTGGCCATAAATTTCACACTCTCGGTCTTATTATTGATCATGTAATTTGGCACGAAAATCCAGATTCATTTAAATGCACGATTTGTGGTAAGAAATTTTTGGCCGGGAATCTTTTGCGACGACATAAAAATGAGGTTCATTTCGGGGTGGATCCCATTATTTATAAATGTGATCAATGTCCGATGGAGTATAATAGACAACAGTCCTTATATCTTCACCGTAAAACGTTACATCCAATACATAACCGAGAGTTTGTGTGTTACATGTGTGGCCGAAATTTCCGTCACCTTCGTACCGTTCAAAGACATTTACAGCACGTTCATGATGCGATGAGGGAATGTGACGATTCTCGAAGATGTGATGTGTGTGGGAAATTCTTTAAAACATCAAGAGGATATGATTTACATTGTAAATTCGTTCACAAATTACAAAATGGTCAATGTACCGTTTGTCAACGATGGTTTAAACATAAGCATATGCTACTGATCCACATGCGAACTCATAAACCGGAAGAACCACGAATTCGTAAACATTGTTGGCAGGAATTGTCACATATTCGAGCGTTACGAAATCATGCAAAACGAATGGATAGCAATGTGTCGTTTTCATGTTATATTTGTCATAAAACGTATAAGAAGTGGATGCCATTGAAACTTAAATTTAAATACGAAATGAATGAACATCCCCTTTGCAATGGCTGCTTCTTAAAAATCCGAAATTTCCATGAATTCTATGTGGAAATACAAAATATTCATGGGAACATATCAGAAGTAGATGTAAAGAAGGAATGGGATATTCTGATTGACGGAGATGCATCATCGGATCGTCAATCAATTAAGGTTGAGTCATCAACCCCGATTACCACGTTAACAGAAGACATCAACAGCGAATCGATTCCCGAGGAAGATTCGGTCGAAGATAAAGTTGAAAATAAAAGAATTGGAAAAATTCGGAAGAGATCCGACAACCCAAAGAATTGTAGTCAAATTAAGGAAAAGAAGGCGAATTCCCAAATGGCTAGTAAATTTGGTATTGGTACCGATTATCACAATAAATTACTACGAACATTCTCTATGAAATGTGATTTATGCGATACGAATTTTAATGATTGGGACGAAGCACGGGATCATTATAGATCGAAACATAATAAATATGGATATTTAACGTGTTGTGGTCGGAAATTTCTCGCTCACGGTCGGATTATTGATCATATAATTTGGCACGAAAATCCAGATTCATATAAATGTACGATTTGTGATAAAACATTTTTGGACGGGACTCGATTGCGAAAACATACAAATGATCTTCATTCGGAGGACGATCGTATACTGTTTAAATGTGATCAATGTCCGAGGGAATATCAGAGACGAAATTCATTAAATCATCACCTGAAAACGATGCATCCGAAAAAGAAACGAGAATATGTGTGCTACAAATGCGGACAAAATTTTCGGGAAATCTGTTCCGTTCGAACCCATTTCAAAATCGTTCATGATCAAAGTGATTCTCGAATCTGTGACGTTTGTGCGAAATTCTTTAAAAGCTCAAAAGCATATGAATTACATTATAAATTGGTTCACACCAACGAACTACCAAAAGTACAATGTCCCGTTTGTCAGAAATGGGTGAAGCATGAATATCTACTACGAGATCACATGCGAATTCATAAACCGCAACAACCACAGATTTGTAAGTATTGTGGAAAGGAGTCACCACACATTCGAGCGTTGCGACATCATGTAAAACGGAATCATATGAACATTTCATTTGCATGCCATATTTGTAATAAAACGTTTAAGAATCCGAAGACGTTGAAAgaacatattgccattcatacgggtgacaagtctttatacacttgttcattttgtccgaaagcatttcgttcaagtgctaatatgtatgcacatcggaaacgagatcatcccattgaatatcaaaattcgGTATTATTAGGTATCAACTATAAAAATAATGCAGACGAGATTGTATCATATCGAGATAGGGAATAA
Protein Sequence: MKTVNCVQCEKVKRSKNSENGKKVYKKIDSQTKYGLEYKNKLLETFSMKCDHCELNFTDWDEARIHYKSAHNKTGYLICCDRKFFTYGRAIEHVIWHDNPDSYKCTICDKSFLDGYRLRKHTNEIHRDDEPIFKCDKCPREYRRRSTLNFHVRTIHSKTTRQYECYKCGQRFVQACSIRQHLRVVHDQGDSRICDICAKFFKCSQSYNLHYKLSHTNEVTKVQCNICKIWLKHEFMLRNHMRVHQQKDIQICKYCGKESPHIRALRSHIQRNHMDITRFPCHICSKLCKNSTKLKEHIAIHTGDNSLYSTEGQLLSESTVGDESVIEIVKLHFPFELRFDNEVNKLVCTECLLKIQNFHEFYLEIRFIHLNLEVYVKNEWDIDEDTQSINVELLNNITKLTEDINNQSIPDEEPVEDEAENERIDKIRMSSENPKNGSEIKKAKRYRKVTSKYRFRSDYFNKLQQTFSIKCDLCETNFNSWTEVRSHYKSEHNKNGYLICCGHKFHDFRQIIDHTIWHGDPNAYKCTICGKTFMAGSLLRRHANIIHSEVVFKCDKCPMEYHRQQSLYLHCKTLHPKIKREFVCYKCGRNFRQIRTLQKHLEMVHDQDDSQTCQICGRFFRNEKTYQVHCRYIHKPKVQCTVCQEWLRNKYTLLTHMRKHRPRKPRPRYYCEYESPHIRAFRNHAKRMNINISFSCYICKKTYKNWLLLREHFAIHTEVYVKKEGDIIIDEDMPSIEVEPINNITVLTEDINGESIPDVEPVEDEAENERIGKVRKRLGNAKTGSESDYHDKLKQIFSMKCDLCETNFNSWTEVRSHYKSEHNKYGYLTCCGHKFHTLGLIIDHVIWHENPDSFKCTICGKKFLAGNLLRRHKNEVHFGVDPIIYKCDQCPMEYNRQQSLYLHRKTLHPIHNREFVCYMCGRNFRHLRTVQRHLQHVHDAMRECDDSRRCDVCGKFFKTSRGYDLHCKFVHKLQNGQCTVCQRWFKHKHMLLIHMRTHKPEEPRIRKHCWQELSHIRALRNHAKRMDSNVSFSCYICHKTYKKWMPLKLKFKYEMNEHPLCNGCFLKIRNFHEFYVEIQNIHGNISEVDVKKEWDILIDGDASSDRQSIKVESSTPITTLTEDINSESIPEEDSVEDKVENKRIGKIRKRSDNPKNCSQIKEKKANSQMASKFGIGTDYHNKLLRTFSMKCDLCDTNFNDWDEARDHYRSKHNKYGYLTCCGRKFLAHGRIIDHIIWHENPDSYKCTICDKTFLDGTRLRKHTNDLHSEDDRILFKCDQCPREYQRRNSLNHHLKTMHPKKKREYVCYKCGQNFREICSVRTHFKIVHDQSDSRICDVCAKFFKSSKAYELHYKLVHTNELPKVQCPVCQKWVKHEYLLRDHMRIHKPQQPQICKYCGKESPHIRALRHHVKRNHMNISFACHICNKTFKNPKTLKEHIAIHTGDKSLYTCSFCPKAFRSSANMYAHRKRDHPIEYQNSVLLGINYKNNADEIVSYRDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -