Snob014605.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- Znf131
- Assembly
- GCA_027564815.1
- Location
- JANTOP010021226.1:18397-27489[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 6.1e-05 0.0021 18.5 0.3 1 23 12 34 12 34 0.96 2 31 3.3 1.2e+02 3.6 2.5 3 23 74 95 74 95 0.97 3 31 0.013 0.45 11.2 0.6 2 23 102 124 101 124 0.96 4 31 0.0014 0.051 14.2 5.6 1 23 131 154 131 154 0.97 5 31 0.09 3.2 8.5 5.3 1 23 321 343 321 343 0.94 6 31 0.00042 0.015 15.8 6.1 1 23 349 371 349 371 0.98 7 31 0.011 0.39 11.4 1.2 1 23 378 400 378 400 0.98 8 31 3.2e-05 0.0011 19.4 2.1 1 23 406 428 406 428 0.98 9 31 0.00017 0.0058 17.1 3.6 1 23 438 460 438 460 0.98 10 31 6.4 2.3e+02 2.7 0.1 1 23 466 489 466 489 0.87 11 31 0.14 4.9 7.9 3.7 1 23 502 524 502 524 0.96 12 31 0.11 4 8.2 1.6 2 23 594 615 593 615 0.97 13 31 0.85 30 5.4 0.3 6 23 626 643 621 643 0.90 14 31 0.0077 0.27 11.9 0.0 1 23 654 676 654 676 0.97 15 31 0.01 0.36 11.5 0.2 3 23 713 734 711 734 0.96 16 31 0.016 0.55 10.9 2.5 1 23 741 764 741 764 0.94 17 31 1.6e-05 0.00057 20.3 2.0 1 23 929 951 929 951 0.96 18 31 0.00086 0.03 14.9 4.8 1 23 957 979 957 979 0.98 19 31 0.0014 0.048 14.2 0.7 1 23 986 1008 986 1008 0.98 20 31 0.0029 0.1 13.2 0.7 1 23 1014 1037 1014 1037 0.97 21 31 0.00042 0.015 15.9 2.5 3 23 1048 1068 1046 1068 0.97 22 31 8.9e-05 0.0031 18.0 5.1 1 23 1074 1096 1074 1096 0.96 23 31 7.7e-05 0.0027 18.2 1.8 1 23 1105 1127 1105 1127 0.99 24 31 0.00023 0.0082 16.6 2.3 1 23 1479 1501 1479 1501 0.96 25 31 7e-05 0.0025 18.3 5.1 1 23 1507 1529 1507 1529 0.98 26 31 0.0015 0.053 14.1 0.6 1 23 1536 1558 1536 1558 0.97 27 31 0.00082 0.029 14.9 2.3 1 23 1564 1587 1564 1587 0.95 28 31 0.00042 0.015 15.9 2.5 3 23 1596 1616 1594 1616 0.97 29 31 0.00083 0.029 14.9 6.1 1 23 1622 1644 1622 1644 0.98 30 31 4.4e-05 0.0016 18.9 2.1 1 23 1653 1675 1653 1675 0.99 31 31 0.36 13 6.6 3.3 1 23 1717 1739 1717 1739 0.96
Sequence Information
- Coding Sequence
- ATGCAAAGGATAAAGAACATCGGAATTAGACCATATATTTGTACCGATTGTGGAATGACCTTTCGTACGGAAAGTGAATTGAATGGCCATGAAAACTATCATGTTTCCGTAAAAAAATTGGTGAAGGAAACGTGTCCATGTGGAGTGTGCGGTGAAATTGTCGATTCAGAAATGATCAGAGAACATGTACAGGTACACTCTGATGAATGGCCAGTTGGATGTGATTTGTGTACGGCACGTTTTACACAGAAAGTGTATCTAGTCTGTCATCGAAATACATATCACAGTAAAGATGAGAACATCACCTGTACGATGTGTAGTGTAAAATTTAAAAATAAACCAAGTCAAATTGCACATATAAGAAGTCGACACAAAATTATTGATAGACCACATAAATGTACCGAATGTGACAATAAATACACACGTAAATATGATTTACGTTTGCATACACGTAGAAAACATTGTGAACATACTATCAATTCAATTGAAGATCAGGATGATTCAAATCAAAGAGTTGTCTTTCTGAAAGAAGAATTTCGAATAACGGACGATGAATTAGAAACAGATAATCCAACTGAACGTAACGAAATAACTGATATTGGAATAAAAGAAGAAGTTAATGAGAATGATGAATTGCCGGACCCAATCATTGAATTTGTCCCTGTGACCGGAATTAAAAATGAAATAACCGAAACATCTGATGTTTTAATAAAGGAAGAGCCTAATCATTCCGATGACATAATTCCTAGCGAGACAGAAGAAATAATAAGGCCAGCACTCGAAACGGAAATTGTTGATGCAATTAAATCGACAAATATTGATGCTACTGATATCGATCAGCTGCTAAACCCTGACCATATAAAGAAAGAAGTTTCTAATGAGACATCGACGACAGAAAAGACTGAATCCCCATTACCAATTACTGTAAAATCCATTCAAGACATCCAAAAGGGATCGAAATATAGTTGTTGTTATTGTGATAAAACGTTTTCGAGTTCTACTAGGGCAAAGGAGCATAAATACATGCATACCGGTGAAAAACCGTACCATTGTGAATATTGCGATAAGAGTTTCCGATATGCCACCCACTATAGTACTCATTTAAAAGTCCATACTAATGGAGTGACATTGTATCAATGCGACATATGTAGTAAAAATTTAAGTTCAAAGAAAAGAATAAAGGGCCATATGCGTTTACATTCCAATGAACGTCCTTATACTTGTAATAATTGCGGGCAGGGCTTTCGACATAGTACTCAGTTAAATGTTCACTTAAGCAGTCATGAGAATACAGGGAAATTAAGGAAATTATTTCAATGTCATGTATGTAGTAAGAGTCTAACTTCAAAACATGGTTTAACCATTCATATTCGTTTACATACAAACGAACGTCCGTACGCATGTGAACTGTGTGGTAGTTTAGAGATATCCTCCGATCAACTGAACGACCATAAAAGAATGTATCATGGTGCGAACGAAGGAAGAGTTCAAAAACCATTCACCCATTTCTGTACGATATGTGATAAGAAGTATCGTTCAGTGGTAGCATTGAAATTCCATCAGAAAAAACACGATGAAATTCGAAATTTTTCATGTACTGAGTGTGAACTAGCAGTTCGAATATTTTATCAAATTGGGGCTAGTCGGAGGAATGGAAATCATGTTGCAACCGAAGACCGACTGATTGAACCAATGGATCAATTTGTTTACAATGACAAAATATTCGGTGATCCAGTGACTGACGAATCGAAAGGCTCCCCAACGCCAATTATGTCCATGAAATGTAAATATTGTGACACGTACTTTTCGGAATTCAAAGCCTGGAAGGAACATAATCAGACACACTCCGGCTACAGACCATATATTTGTATCGCTTGCGGAATGACCTTTCGACAGGACACTGAATTGAGTACGCATTCGAACTACCACGTCGCCATAAAAAAGTTGGTAAAGGAATCGTATCCATGTGGAGTGTGCGGTAAAGCATTCCAATCAGATAAAACGATCAGGGAACATATACTGGTACATACGGATGAATGGCCAGTTGGATGTGATTTATGTTCGGCACGATTTACACACAAAGTCTATTTAGCATGTCATCGAAATACATTTCATAGCAATAATGAGAATATCGCCTGTACGATTTGTAGTGAAACATTTAGTAGTAAAGCACGGCAAGTAGCACATATGAAGAGCCAACATAAATTTATCGATAGGCCACATAAATGTATCGAATGTAACAATAGATATACACGGAAATATGATTTACAATTACATATACGTAATATACATTGCAGAAATATTACATATCCAGATCTGAATGACTCAAATCAAAATGTTTATGTGAAGGAAGAATTTCATATAACGGACGATGAAATAGATAATCCAACTGAAAGCGAAAAAATACCCGATATTCAAATTATCGAAAATGATAAGGAAAACGATGAATTGACCGACCCAATCATTCAATTTGTGAATATTGATGAAATTAAAAAGAAATCAATTGAAAATATTCAGGTTTCAATAAAGGAAGAGCCGAAACAACTCGATGACATATTTCCTAGCGTTAAAGAGGAAATCATACAGCCACAAGTTCGTATGGAATCGAAGGACGAAACTATATCTACAAATAATATTGAGACTGGTGATAATATTCAATTGTTATACCCTGAATTTAAACAGGAAGATATTTGTAAACAATCTGATGATGAGGCGTCGACAATAGAAACGGCTGGCTTCCCAATTGTTGTAAAACCCGTGAAACACATTCGGATACGATCGACATATAAATGTAGTTATTGCGATAAAACATTTTCGAGGTCTAGTTCGGTAAAGGAGCACGAGTACATACATACCGGTGAAAATCCGTATCATTGTGTAGATTGCGATAAGAGCTTTAGATATGCCACTCACTATAGTAGTCACTTAAAAATTCATATTACTGGGGTGAAATTATATAATTGTGAGATATGTGGAAAAAATCTTAGTTCAAAAACTAGAATAAAGGAACATATGCGTTTACATTCCAATGAACGTCCTTACATATGTGATTTGTGTGACGGTCGATTTATTTCAGCAAATCACTTGAGTTATCATCAAAGATCAGTTCACATGACAGGACCACCCCCAAACGAATATGGATGTGACTACTGTAATAAGACCTTTTCGAGATGTAGTTCGGCGAGGGAACATCAAAATGTTCATACTGGTGATAAACCTTACCTTTGTAATGATTGCGGGAAGAGCTATCGATATAAAACTCATTTTGCCCATCACTTACGAATTCACGCCAATAAAGGGATAAGGAATTTATATCAATGTAATATATGTAGTAAAAAAATAACTACTAAACATGCTCTAACCATTCATATTCGTTTACATACAAACGAACGTCCGTACGCATGTGATTTGTGTGATAGTCGAGAGGTATCATCACGTCGATTGAGCGACCATAAAAAAATGTTCCATGGAGCGAATGAAGGGAGAATCCATAAACCATTTACACATTTTTGTTCGTTATGTGATAAAAAATATCGCTGTACCCATAAACCGGGATGGATCCTCCTTACCTGTGCCGACGAAGCCAGCCGAAATTGGTTGTTCGATAACATAGGTAAAATTAAACCCTGGGAAGGAGCTGATCTAAAAATAGTCGAAGGTAACGCCCTACCCGTTCAAAAGATCTGCGTGGTTTTCGTTCCGGATGATGAAGAAAAACCATCACAGGAGGAGACCGGAACCGGAGACCAACTGATTGAACCAATGGATCAATTTGTTTACGATGACAAAATATTCGACGATCCAGTGACTGAAGAATCAAAAGGCAATAATGAGCCAGGCGATCCTGGATATATCGATAGGCAACATAAATGTATCGAATGTAATAATAGATATACATGGAAATATGATTTACAGTTACATAAACGTAATATAGATTGTAGAAATATATATTCGGATCTGAATGATTCAAATCAACATATTTTTGTGAAGGAAGAACTTCATATAACGGACGTTGAAATAGATAATCCAACTGAAAGCGAAAAAATACCCGATATTAAAATTAACGAAAATGATAAGGAGAACAATGAATTGATCGACCCAATCAATCAATTTGTGATTATTGATGAAATTAAAAAAGAATTATTTGAAATTATTCAGGTTTCAATAAAGGAAGAGCCGAAACAATGCGATGACATATTTCCTAGTGTAAAAGAAGAAGTCACACAGCCACAACTTTGTATAGAATCGGAGGATGAAACTATATCTACAAATAATATTGAGACTGGTGATAATATTCAATTGTTATACCCTGAATTTAAACAGAAAGATATTTGTAAACAATCTGATGATGAGACATTGACAATAGAAACGGTTAATTTAACTGACTTTCCAATAACTGTAAAACCGGTGAAACACATCCGGACAAGATCGACGTATAAATGTAGGTATTGCGATAAAACATTTTCGAGATCTAATTCGGTAAAGGAGCACGAGTACATACATACCGGTGAAAATTCGTATCATTGTGTAGATTGCGATAAGAGCTTTAGATATGCCAGTCATTATAGTAGACATTTAAAAATTCATATTATTGGAGTGAAATTATTTAATTGTGAGATATGTGGAAAAAATGTAAGTTCAAAAACTAGAATAAAGGAACATATGCGTTTACATTCCAATGAACGTCCTTACTTGTGTGATCTGTGTGATGCTCGATTTATTTCAGCAAGTCATATGAGGCATCATCAAAGATCAGTTCATAGGACGGGTCCAAACGTATATGGATGTGACTACTGTAATAAAACCTTTTCGAGATGTAGTTCGGCGAGGGAACACCAAAATGTCCATACCGGTGATAGACCTTATCATTGTAATGATTGCGGGAAAAACTATCGATATAAAACTCATTTTGCCTATCACTTGAGAATTCACGCCAATAAAGTGAAAAGGAATTTATATCAATGTAATATATGTAGTAAAAAAATAACTACTAAACATGCTCTAACCATTCATATTCGTTCACATACAAATGAACGGCCATACGCATGTGATTTGTGTGATAGTCGAGAGGTATCATCACGTCGATTGAGAGCCCATAAAAAAATGTTCCATGGTGCGAATGAAGGAAGAATCCATAAACCATTTACACATTTTTGTTCGTTATGTGATAAAAAGTATCGGTCAATAATCGCATTAAATTTCCATATGAAAAAGCACGCTAAATGA
- Protein Sequence
- MQRIKNIGIRPYICTDCGMTFRTESELNGHENYHVSVKKLVKETCPCGVCGEIVDSEMIREHVQVHSDEWPVGCDLCTARFTQKVYLVCHRNTYHSKDENITCTMCSVKFKNKPSQIAHIRSRHKIIDRPHKCTECDNKYTRKYDLRLHTRRKHCEHTINSIEDQDDSNQRVVFLKEEFRITDDELETDNPTERNEITDIGIKEEVNENDELPDPIIEFVPVTGIKNEITETSDVLIKEEPNHSDDIIPSETEEIIRPALETEIVDAIKSTNIDATDIDQLLNPDHIKKEVSNETSTTEKTESPLPITVKSIQDIQKGSKYSCCYCDKTFSSSTRAKEHKYMHTGEKPYHCEYCDKSFRYATHYSTHLKVHTNGVTLYQCDICSKNLSSKKRIKGHMRLHSNERPYTCNNCGQGFRHSTQLNVHLSSHENTGKLRKLFQCHVCSKSLTSKHGLTIHIRLHTNERPYACELCGSLEISSDQLNDHKRMYHGANEGRVQKPFTHFCTICDKKYRSVVALKFHQKKHDEIRNFSCTECELAVRIFYQIGASRRNGNHVATEDRLIEPMDQFVYNDKIFGDPVTDESKGSPTPIMSMKCKYCDTYFSEFKAWKEHNQTHSGYRPYICIACGMTFRQDTELSTHSNYHVAIKKLVKESYPCGVCGKAFQSDKTIREHILVHTDEWPVGCDLCSARFTHKVYLACHRNTFHSNNENIACTICSETFSSKARQVAHMKSQHKFIDRPHKCIECNNRYTRKYDLQLHIRNIHCRNITYPDLNDSNQNVYVKEEFHITDDEIDNPTESEKIPDIQIIENDKENDELTDPIIQFVNIDEIKKKSIENIQVSIKEEPKQLDDIFPSVKEEIIQPQVRMESKDETISTNNIETGDNIQLLYPEFKQEDICKQSDDEASTIETAGFPIVVKPVKHIRIRSTYKCSYCDKTFSRSSSVKEHEYIHTGENPYHCVDCDKSFRYATHYSSHLKIHITGVKLYNCEICGKNLSSKTRIKEHMRLHSNERPYICDLCDGRFISANHLSYHQRSVHMTGPPPNEYGCDYCNKTFSRCSSAREHQNVHTGDKPYLCNDCGKSYRYKTHFAHHLRIHANKGIRNLYQCNICSKKITTKHALTIHIRLHTNERPYACDLCDSREVSSRRLSDHKKMFHGANEGRIHKPFTHFCSLCDKKYRCTHKPGWILLTCADEASRNWLFDNIGKIKPWEGADLKIVEGNALPVQKICVVFVPDDEEKPSQEETGTGDQLIEPMDQFVYDDKIFDDPVTEESKGNNEPGDPGYIDRQHKCIECNNRYTWKYDLQLHKRNIDCRNIYSDLNDSNQHIFVKEELHITDVEIDNPTESEKIPDIKINENDKENNELIDPINQFVIIDEIKKELFEIIQVSIKEEPKQCDDIFPSVKEEVTQPQLCIESEDETISTNNIETGDNIQLLYPEFKQKDICKQSDDETLTIETVNLTDFPITVKPVKHIRTRSTYKCRYCDKTFSRSNSVKEHEYIHTGENSYHCVDCDKSFRYASHYSRHLKIHIIGVKLFNCEICGKNVSSKTRIKEHMRLHSNERPYLCDLCDARFISASHMRHHQRSVHRTGPNVYGCDYCNKTFSRCSSAREHQNVHTGDRPYHCNDCGKNYRYKTHFAYHLRIHANKVKRNLYQCNICSKKITTKHALTIHIRSHTNERPYACDLCDSREVSSRRLRAHKKMFHGANEGRIHKPFTHFCSLCDKKYRSIIALNFHMKKHAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -