Snob010061.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Symmerus nobilis
Gene Symbol
zfh1
Assembly
GCA_027564815.1
Location
JANTOP010039459.1:189-9370[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.5 18 6.2 1.3 2 13 44 55 43 62 0.88
2 35 0.00086 0.03 14.9 1.3 1 23 68 90 68 90 0.95
3 35 0.12 4.1 8.1 0.2 3 23 132 153 131 153 0.95
4 35 0.068 2.4 8.9 0.2 2 23 160 182 159 182 0.90
5 35 0.027 0.96 10.1 0.2 2 23 378 400 377 400 0.93
6 35 0.13 4.5 8.0 0.4 1 23 406 429 406 429 0.96
7 35 0.037 1.3 9.7 3.2 1 23 438 460 438 460 0.91
8 35 0.00052 0.018 15.5 1.5 1 23 466 488 466 488 0.98
9 35 3e-05 0.0011 19.4 0.3 1 23 495 517 495 517 0.98
10 35 0.0043 0.15 12.7 0.6 1 23 523 546 523 546 0.96
11 35 0.0026 0.093 13.3 1.9 1 23 567 589 567 589 0.97
12 35 0.0015 0.052 14.1 0.2 1 23 595 617 595 617 0.96
13 35 0.00011 0.0041 17.6 0.3 1 23 624 646 624 646 0.99
14 35 0.06 2.1 9.0 4.6 1 23 652 675 652 675 0.97
15 35 0.43 15 6.4 3.0 1 23 691 713 691 713 0.95
16 35 0.01 0.36 11.5 0.5 3 23 744 764 743 764 0.98
17 35 0.15 5.3 7.8 1.6 1 23 770 792 770 793 0.93
18 35 0.18 6.4 7.6 0.2 1 23 803 825 803 825 0.97
19 35 5.2 1.8e+02 3.0 2.8 3 23 833 854 832 854 0.93
20 35 0.015 0.55 10.9 0.8 2 23 861 883 860 883 0.96
21 35 0.00032 0.011 16.2 3.6 1 23 889 912 889 912 0.96
22 35 2.5 87 4.0 2.2 2 21 1054 1073 1053 1076 0.94
23 35 0.0033 0.12 13.0 1.1 1 23 1114 1136 1114 1136 0.97
24 35 0.00011 0.0039 17.7 6.6 1 23 1142 1164 1142 1164 0.98
25 35 0.0049 0.17 12.5 0.1 1 23 1171 1193 1171 1193 0.98
26 35 0.00056 0.02 15.5 1.7 1 23 1214 1236 1214 1236 0.96
27 35 0.0067 0.24 12.1 0.3 1 23 1242 1264 1242 1264 0.96
28 35 0.00042 0.015 15.8 0.8 1 23 1271 1293 1271 1293 0.99
29 35 0.027 0.96 10.1 1.4 3 23 1301 1322 1299 1322 0.95
30 35 0.038 1.4 9.7 6.1 1 23 1337 1359 1337 1359 0.95
31 35 0.00035 0.012 16.1 0.1 1 23 1365 1387 1365 1387 0.95
32 35 1.1e-05 0.00038 20.9 1.3 1 23 1393 1415 1393 1415 0.99
33 35 0.053 1.9 9.2 4.4 1 23 1421 1444 1421 1444 0.97
34 35 0.1 3.6 8.4 4.4 1 23 1461 1483 1461 1483 0.96
35 35 0.024 0.85 10.3 2.8 1 23 1489 1512 1489 1512 0.97

Sequence Information

Coding Sequence
ATGGATACATCAACTTCGGATCCAAATAACGATATCCTATTAATGGATTCAATCAATGAATTATTAAACGGTAATCCAATCGACTCGATGAGGGATGATTCAGACAACTTACCACCGATTATGACAAAGAAATGTAAATATTGCAACAGGCGATTCAAAAAGTGGTTAAATCATGAACAAACCCATGCTGGTTTACGGCCCTATCTTTGTACTAAATGTGGAATGACGTTCCGACAGGAAAGTACAATGAGAAGTCATGCAAATTATCATCTAGCTGTAAACGGATTGATAAAGGAAACATATCTATGCGGAGTGTGCAGCGAACATTTACATTCAGAGGACGGGATTAAAGATCATGTTAAGCGTTTACATACCGTCGAATGGCCGGTTGCATGTGATTTATGTACAGCACGATTTACAACTACCGTTTATTTAGAATATCACCTAGAATCGTTTCATGCTAATGAGGGGAACATCACTTGTTGGATTTGTAGCGAGAAGTTTGGTAGTAAATCAGATCAAATGAAACATATTGGGGAAAATCATACTATCGATAAACTAAATGAATATAAAAAAACGAAGAAGAAATATACTCGAAAAAATAATGCGGGTATCGATAAACATGGTAAAAATAGTGTCGATTTGGAAAAAATTGAAACGGTAATAGACAATCCAATTAAACGGAGCGATGTTGAGCTCAAAGTATATAGTAATGATGGTGATTTATTAGAACCCAACATACAATTTGTTAACGTAAATGAAATAAAAAAAGAATTGATAGAAGAAGATTTTAAAAAGGAAGAATTGGTTCAACCACATGAAATATTCCAAATTAATTCAAAGAAGGAGGAAACAACACCTTTACGAGACGATGTGTCTAAATCTAATAAGGAAATTATCAAAATCGAAGATGAAGATCAACGACAATCTCCTTGTGAAACTGATTATGTAATGGATGAATTTACCGAGCATTCTTTTCCGGAAGAATTACCGATTAAAACATCCGAGTCCCCTAAAAAAGGTCTTGATAAAATACATCGTACTAATGTAAAAACGAAGACTGGTAGAAAGAGTCGTATTACGTTAAGTCCGAAACCGATGCCTACCATCCAAACGGTTACGGAAGCACTTAAATGTAATGTATGTGGTAAACAATTTGAATCACTAACAATTCTAATTGAACACCAGACACGGATACATTCCGATGTATTGAGCTTTGTATGTGATTTCTGTGATGACCGATTTCTAACAGCGCGTAATTTGAATCAACATTTAAAACTAATCCATAAGACTGTCCGACCACCAATCAAATATAAGTGTACGTACTGTGAGAAGGTCTTTAAGACATGCACGGTTGCGAAGGATCACGAAAATCTACATACCGGTGAAAAACCATACAATTGTAAGGAATGCGGGATAAATTTTATTTTTGGCTCAACATATCGGCGCCACTTAAGGAAACATGCTGGGACAAGGAAATTTTTTGAATGTGATATATGTGGCAAAATTATATATTCTAGGTCTTTCCTTACcgtccacatgcgtatgcatgccaatgtacatacgtacatatgtgatatttgtgatatGGGGTGTAGGACAGCATACCGTTTGAATGCCCATCGAAAATTAATCCATAAGATTAAAACATCTATCACTGTAAATGAAACCCCAATTTATCGGAGAAGAAGAAAGAAGCATAAATGTCAATATTGTGATAAGACGTTCGGACAAATCGCTACAATGAAAGATCATGAGAACATGCATACGGGTGAGAAGCCTTATCTTTGTACGGAATGTGGAACGAGTTTTGCATATGGAGGTGTCttaaaaaatcatatgaaattacacgctaatagatcagaattatataaatgtgatgtgtgtgggaaaattctatattcagatcagaatttaaccgatcatatgcgattgcatacaaacgaacgtccgtttacatgtgatttgtgCGGTTGTCGGGTAATATCTAGGCGCCATTTAACCTACCATATAAGCAAGTATCATGGTCCGAATGAAGGAATTGTTGTACCGAATAGTAAACCGCATACTCATTTCTGTTCGTTATGCGATAAAAAATATCGTTCAATAATTGCGTTAAATTTCCACTTACGAAAACACGTTGAAGACGTTGACCGGTTGATCAAACGAATCAATCATAACTCTAATGATTGGACGGCTTCCAAAAACTCACCAATTGCATTGAAATTATGTAAATATTGCAACAAAGAATTTGCTGATTTTAAAACATGGGTGGACCATGTACAGACCCATACCGGTTTACGGCCATTTATTTGCACAAACTGTGGAATGACCTTTCGAGAAGACACTATATTCAAAAGCCATATAAGAGCTCATCATTCCGACAATCAGTCGATTAAAGAAACGTATCCCTGTGGAGTTTGTGGCGAACATGTACATTCCGAAGATGATATTAGAGAACATATTCAATTGCATATCGATGAATGGCCCGTTGCATGTCATTTATGTACGGCACGATTTACAAGCCCAATTTATTTAGCATGCCATCGTAATTCATTCCATTCGAATGGGGATAATATCACTTGTAAGATTTGTAGCGAGAAGTTTGATAGCAGAGCGGATCAAATTAAACATAACCGAACGTATCATACAATTGAGAGGACGCATGAATGTAACGTATGTGAGAAGAGATATACCAGAAATTGTGATTTACAATTACATATTCGTAATATACATGGTCAAGATAGTAACAGTCCAATACTTATAAAACCAGAAATTCATCTAACGGGCGATGGATTAGATAATCGGAACGAATTACAGGAAATCGCTGACGTTTGGATTAAAGAAGAATTAAACCCCGATAATGAATCAGTCAATGCAATCACACCAATTAAAAATGAATTAATCAATACGACTGATCTTTGTAAAACGGGAAAGTTTGACGAATCTAACGAGTTATTGTATGAATATAAACAACAACGGGGATTACCTTTTCATTTTAATTGTAAGAAGGAAGAACTGAGTGACCAAAGTGATGATGACATATCGTCTCTTGAAACAATCGACTCAGGGGGAGATCGTCCGAAATTAAACACTGATGAAAAGTCAAAAATTCAAAATCTTCGGCCACAACAGGTCCAAACAGTTACGGAAGCGCTCAAATGTGAATTATGTGGTGAGCAACTACATTCACGGAATTCACTAATCGAACATACCCGATGTTTACATTCGGATGAAATGCAACATAAATGTCACCAGTGTGAGGCACGTTTCCAAACATCACGTGGCCTAAGTTGCCATTTAAAATTAATCCATAAGACTAGCCGCCCCCCAACTAAGTATAAATGTACATATTGTGAGAAAATCTTTACCCGATATATTACGGCGAAGGATCATGAGAATGTACATACCGGTGAAAAGCCATATCATTGCAAGGATTGCGGGAAGAAGTTTATGTATAAACCGCACCTAAGAAGTCACTTGAAAACTCATTCTAATAAATCGAATTCATATGAATGTGATTTATGTGGTCAATCTATATTCTCAAAACTTGGACTTATCACACATATGCGTCTACATGTCAATATTGACCATCCAATTATTGTAAATGCGGTGCCAAACATACGAATAGGGACAAGATATAAATGTAAATATTGTGATAAAACCTTTACAAGAGGTACTACCGCTAAGGAGCATGAGAACGTACATACAGGCGAGAAACCTTATCTGTGTAACGATTGCGGGCTGGGTTTTGTCTACGGTAGTACGTACCGAATCCATTTAAAAAACCATACGAAAATAACGGAATCTTATCAATGTGATTTATGTGACAAAAATATATATACAAAATTTGGACTAACCGAACATATGCGTCTACATTCCACTGAATATCCGTATGGATGTAATATGTGCGATAGTCAATTCAAGTCAACAGATCATTTGATTGACCATCGAAAATTAATCCATAAGACTGTAAATGTAAATGAAAACATCCGAATAAGGAAGAAACATAAATGTAAATATTGTGAGAAAACCTTTTCGAGGTGTACTACAGCCAGGGAACATGAAAGTGTTCATACCGGTGAGAAACCGTATCTGTGTAATGATTGTGGGATCGGCTTTATATACGCTagtggtttaagaaatcatgtaaaattacattctagaacggaactatataaatgtgatatatgtgggaaagatctaacttcaaagcataccctaatcgatcatatgcggttacatacaaatgaacgtccatataaatgtgatcagtgtgataggcgtgtaatatcaacacgtcatttaacgtaccataAGAATAAATATCATAATGGTTTGAGTACATATAGAAGCATACCAATTAGTAAACCATTTACCCATTTCTGTTCGTTATGCGATAAGAAATATCGCTCAATGAATGCGTTAAATTTCCATATGAGGAAGCACGCTGAAAATAGAAAATATTCGTGCCCCGAATGTTGTGCTACATTTAAGAAGGCAAAACATTTACTTCTTCACATAAATAGAATTCATTTGTTAAGAAGTGCAAATAAGTAA
Protein Sequence
MDTSTSDPNNDILLMDSINELLNGNPIDSMRDDSDNLPPIMTKKCKYCNRRFKKWLNHEQTHAGLRPYLCTKCGMTFRQESTMRSHANYHLAVNGLIKETYLCGVCSEHLHSEDGIKDHVKRLHTVEWPVACDLCTARFTTTVYLEYHLESFHANEGNITCWICSEKFGSKSDQMKHIGENHTIDKLNEYKKTKKKYTRKNNAGIDKHGKNSVDLEKIETVIDNPIKRSDVELKVYSNDGDLLEPNIQFVNVNEIKKELIEEDFKKEELVQPHEIFQINSKKEETTPLRDDVSKSNKEIIKIEDEDQRQSPCETDYVMDEFTEHSFPEELPIKTSESPKKGLDKIHRTNVKTKTGRKSRITLSPKPMPTIQTVTEALKCNVCGKQFESLTILIEHQTRIHSDVLSFVCDFCDDRFLTARNLNQHLKLIHKTVRPPIKYKCTYCEKVFKTCTVAKDHENLHTGEKPYNCKECGINFIFGSTYRRHLRKHAGTRKFFECDICGKIIYSRSFLTVHMRMHANVHTYICDICDMGCRTAYRLNAHRKLIHKIKTSITVNETPIYRRRRKKHKCQYCDKTFGQIATMKDHENMHTGEKPYLCTECGTSFAYGGVLKNHMKLHANRSELYKCDVCGKILYSDQNLTDHMRLHTNERPFTCDLCGCRVISRRHLTYHISKYHGPNEGIVVPNSKPHTHFCSLCDKKYRSIIALNFHLRKHVEDVDRLIKRINHNSNDWTASKNSPIALKLCKYCNKEFADFKTWVDHVQTHTGLRPFICTNCGMTFREDTIFKSHIRAHHSDNQSIKETYPCGVCGEHVHSEDDIREHIQLHIDEWPVACHLCTARFTSPIYLACHRNSFHSNGDNITCKICSEKFDSRADQIKHNRTYHTIERTHECNVCEKRYTRNCDLQLHIRNIHGQDSNSPILIKPEIHLTGDGLDNRNELQEIADVWIKEELNPDNESVNAITPIKNELINTTDLCKTGKFDESNELLYEYKQQRGLPFHFNCKKEELSDQSDDDISSLETIDSGGDRPKLNTDEKSKIQNLRPQQVQTVTEALKCELCGEQLHSRNSLIEHTRCLHSDEMQHKCHQCEARFQTSRGLSCHLKLIHKTSRPPTKYKCTYCEKIFTRYITAKDHENVHTGEKPYHCKDCGKKFMYKPHLRSHLKTHSNKSNSYECDLCGQSIFSKLGLITHMRLHVNIDHPIIVNAVPNIRIGTRYKCKYCDKTFTRGTTAKEHENVHTGEKPYLCNDCGLGFVYGSTYRIHLKNHTKITESYQCDLCDKNIYTKFGLTEHMRLHSTEYPYGCNMCDSQFKSTDHLIDHRKLIHKTVNVNENIRIRKKHKCKYCEKTFSRCTTAREHESVHTGEKPYLCNDCGIGFIYASGLRNHVKLHSRTELYKCDICGKDLTSKHTLIDHMRLHTNERPYKCDQCDRRVISTRHLTYHKNKYHNGLSTYRSIPISKPFTHFCSLCDKKYRSMNALNFHMRKHAENRKYSCPECCATFKKAKHLLLHINRIHLLRSANK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-