Snob016469.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_027564815.1
- Location
- JANTOP010028604.1:6818-9292[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 5.7e-14 51.7 0.0 1 45 11 56 11 56 0.96 2 2 7.4e-19 1.2e-15 57.0 0.0 1 43 451 494 451 496 0.95
Sequence Information
- Coding Sequence
- ATGTCAACGGTGGCCGGACGTCGGAGCTATACAGAAGAGGAACTACAGAATGCTTTACAGGATATTCTTAGTGGTAAATTGGGTACACGACGGGCAGCCGTTCTCTACGGTATACCAAGATCAACGCTACGAAATAAAGTTTACAAACTTGCCATGGAACAAAAACGGGAAGCATCATTATTACCGCAAACAGCTGTATTCGATGCACTTGATCAAGACGACGATGACAAAGAATCTGGTGGTGAGGACGATAAGGATTTAATGAAACCGCTATCAAATCCTCTATTAACGACTGAAGATTTATTACGATTAACATCGCATCGGACGTCCGTATCACCAGCGTCAATGGCCACAACATCAGGCACAAGTCTATCAGGATTACATCAAAAGTATGCTAGCATATATGAGAATAGTAATCCAAAACAAGATCAACTATTAAAAGAACAATTAAAATTACACACAACACCTCCAATACCACATCCGGCAACACCGGTTGTTAACAATCCATTTATGGAACCGGTTATGATACAAAATCTTCTCCTAGCCGGTGGTTTAATGCAACAGAAGACGGATGAAACAACGTTACAGGAACTGCTACATAACATTTTCTTACAACAACAAGAATTAATTAAGGAACAATTAAAACAATCGGCAACGGTGAGTGATCAATTAAATAACGGTAAACAATCGATACCGGATGCGACTCGCCATCTTATGCAGAATTTATCATTATTACAACAGCAACATCTGCAACATGCCCGACTGATGGGTAAATCGGAAACACCAGACACCGGATCCTTATCGGCCGATCCGAATGATGCCAGTGACGATTCCGCTGTGATATTGAAAATTCCGTCCTTCAAGCCAATTGCCGGTTCATCGACGTCATGTCGAAATGGTAGCGAAAGTGTTAGTGATACAACGCCACAATCAACACCACCAATACTATCTAGGAGTCCGCATACACAGTTGCCTGGCATATCACCAACGCAGTTGAGACAAGCATCGGCCAGTTGTGAACCGACATCGCCACCATTGGGTGTTGGCAGCAAAGGTATCCTATCACTTCGAGATGTTATTGCCAAAAGTATAACAAGAACATTCAATCAAGAACATCACCACCAACATCGCCAGCAACAGCAAAGCCTCGAAAATTCTAATAAGCCTTCCATTGATCTAGAAACGTATAAGCGACCGAGTATCTCGGTTATAAAAAATTTAAGTGGAACGGATATAACCCGATTCGGTACCAGTCCGAATTTAATGGGAGCTGGTGGAAGCAGGGCCAACGATCAATCAATGTTGGGTGGCAAAGGTACACGACCAAAACGGGGTAAATATCGAAATTATGATCGGGATAGTTTGGTAGAGGCGGTGAAAGCTGTACAACGTGGTGAAATGTCGGTGCATCGAGCTGGTAGTTACTATGGCGTACCACACTCGACACTGGAATATAAAGTGAAAGAGAGACATTTGATGCGACCGAGAAAACGTGAACCAAAACCTCAACCATTAGACGGTACAACAACGTCAACGATTAAAAGTCAATCAGATATTTCCGGATCTCTAGGTGGTAGTTCAAGCAGTATTGCTTTACGTTCAATTGATAAAAGTAAACATTTATCAACAACGAAACCTCCAATAAAAACACCACCATTCCCATCATCTACATCACCGAACGGTTTAAAAATGAATCTGTTCGATCCCACCCTCCAGTATGCACCACAACTCTTTTGGCCACCGCACGGTAATTATCCCGGTTTACCACCATCCGTTCAATTACCGCCCGGTGCCAGTGCATCATTCCCACAAAATGCGGAATCATTTTTTGCCACCCAAGTAATGCGTTTTCAGGAGGATGCATTCCGACAAGCGGCTGGCATGGCTGGATCATCATCATCCGGTTCATCGGCCACTTCAAATTCAAAGTCTAGTTCCATTAATAATATCAGTCAATCGAAAAGTACTAGAGATCTGGCTGAAAGTTTGTACGATTCATCAAATGGAAACGGTTCGTTTTTAGATGGGATCATACGGCATAGTTTAGATCGGAAACCTCCCGAAATTACCCACGGCGCCCTCTTAGATCAATTAGTTAAAAATAATAATCGACATCCGATGATTAAAGAGGAGATTAGTAGTTCTAGTGGTTTATCATCGTCCACAATTACAGCTACAGCTACAACAGCAACAAAACGATCCGGTAGCCCGATACATTTCGCTAAATCAGAAATTAAGAAAGAACGAACTAGTCCAGTACCGGATGATTTAGACGATCCGGATATCGGAACGAACAATCAAACCGATCATCTACTTAAATATCGAGAGAGCCTCTCACTGCGGTTAAGTGAAAACCTTCAAAGTTCCACAGAAGATTTAAATGGTGGCAATTCATCGCCGGATGATAAGCCAACAATACATCACCAAATACGACATCATATCCCACATCATTCTGATAATGATGATAGTTTATAG
- Protein Sequence
- MSTVAGRRSYTEEELQNALQDILSGKLGTRRAAVLYGIPRSTLRNKVYKLAMEQKREASLLPQTAVFDALDQDDDDKESGGEDDKDLMKPLSNPLLTTEDLLRLTSHRTSVSPASMATTSGTSLSGLHQKYASIYENSNPKQDQLLKEQLKLHTTPPIPHPATPVVNNPFMEPVMIQNLLLAGGLMQQKTDETTLQELLHNIFLQQQELIKEQLKQSATVSDQLNNGKQSIPDATRHLMQNLSLLQQQHLQHARLMGKSETPDTGSLSADPNDASDDSAVILKIPSFKPIAGSSTSCRNGSESVSDTTPQSTPPILSRSPHTQLPGISPTQLRQASASCEPTSPPLGVGSKGILSLRDVIAKSITRTFNQEHHHQHRQQQQSLENSNKPSIDLETYKRPSISVIKNLSGTDITRFGTSPNLMGAGGSRANDQSMLGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTTTSTIKSQSDISGSLGGSSSSIALRSIDKSKHLSTTKPPIKTPPFPSSTSPNGLKMNLFDPTLQYAPQLFWPPHGNYPGLPPSVQLPPGASASFPQNAESFFATQVMRFQEDAFRQAAGMAGSSSSGSSATSNSKSSSINNISQSKSTRDLAESLYDSSNGNGSFLDGIIRHSLDRKPPEITHGALLDQLVKNNNRHPMIKEEISSSSGLSSSTITATATTATKRSGSPIHFAKSEIKKERTSPVPDDLDDPDIGTNNQTDHLLKYRESLSLRLSENLQSSTEDLNGGNSSPDDKPTIHHQIRHHIPHHSDNDDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -