Snob005944.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- kn
- Assembly
- GCA_027564815.1
- Location
- JANTOP010088864.1:1-5942[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-90 9.2e-86 288.5 0.1 248 384 12 148 4 151 0.97 2 2 0.0014 13 4.0 0.0 422 442 152 172 147 177 0.85
Sequence Information
- Coding Sequence
- CCTATAAAATATGCAGGTCTTTATCCACCATTACCTGTGGCTACACCGTGCATCAAGGCCATTTCACCTAGTGAAGGGTGGACCAGCGGAGGTGCTCAAGTTATTATTGTTGGTGATAATTTTTTTGATGGACTGCAAGTGGTTTTTGGAACCATGTTATTATGGAGTGAGTTTATTACGACACACGCCATTAGAGTACAAACACCTCCTAGACCAATACCTGGAGTAGTCGAAGTTACTCTATCTTATAAAAGCAAGCAATTTTGTAAAGGATCTCCTGGACGGTTTGTTTATGTTTCTCTTAATGAACCCACTATTGACTATGGTTTTCAACGACTTCAAAAACTTATTCACCGACATCCTGGTGATCCTGAAAATTTACCAAAGGAAATAATATTAAAACGAGCTGCTGATTTAGCCGAAGTATTTTATTCCATGCAAAGATCTCCTGGCGGTTCAACGGGATTTAATTCATACACAGGACAATTAGCTGTCAGTGTTCAAGATGGTACTGCGCAGTGGGTTGAAGGTAAGTAA
- Protein Sequence
- PIKYAGLYPPLPVATPCIKAISPSEGWTSGGAQVIIVGDNFFDGLQVVFGTMLLWSEFITTHAIRVQTPPRPIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIHRHPGDPENLPKEIILKRAADLAEVFYSMQRSPGGSTGFNSYTGQLAVSVQDGTAQWVEGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -