Snob005452.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- JARID2
- Assembly
- GCA_027564815.1
- Location
- JANTOP010063364.1:743-7686[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 3.9e+03 -1.6 0.0 49 68 5 25 3 32 0.71 2 2 6.6e-23 1.8e-19 70.0 0.0 6 89 577 658 572 658 0.93
Sequence Information
- Coding Sequence
- ATGAATGCGAAAGTTGACAAAAACAATATAAACTGGGAACATGTGATGGGTAAACTCGGACTGGGCGATATGAATGAGAATAGGGAATTGGTCGAACCAGACCCGACTGGATACGATAAATTAATGGAAGAGCAACGTCAATTAGACATAATCAAGCAGTTGGCCAACAAAGATGTCCATCCGCCAAAAGTGACGAAATCTGACGATAAATCTGTGTTAAGAGACTCTACATCGCGAGCAGTAATGGGAAATATGTTAGAATCAAATTTAAAGCGTGAAACTGATATGGCAAACAGTATTAAAATTCATGTGGGCGTTAAGACAACGCCCCAAAGTTCATCCACATTGATACAGCCACCGAAAAAGGATATCGACGAGAAACCGGTGAAAAAGATTACCAACGAACCCGTCAAACAGCCATCGACCGTTATTAGTAAACCAACGATAACACCAAGTCCAAGTTCATCTAGTCTAATTGGTAAAAGTCGTGTAACATCAACGACAACCAGTGATAAAATATCGCCGGACAATAAAAAGCTACCCATTTACAATCAACGTCGTACACCCGTTTACAAACCGATTACACCACCGAAAACATCGGATCTAGTAAGTAAAGCGAAAGATGTGGTAAACACGTTCGGTGCTTTCTCACCAGAAAATGAACCGAGCATCTATTCATTTGATAAGGAAGATGAGGTTATTGCGCCAACAACGACCCCATTTCGACGACAAGGACGCCGGGAATCGGAAAGTAAACGTGATGAGAGTACAGCGAAAAGTCAATCGAATGTTGATGATACATCACCAAAATCACAAAAATCACAACAACAACAACAACAACAGCCACCGCAGGTATCGCTCACCTTAAGTCCGGATGATAATGCTAAATCGGCATCAATTGCCGTACAGCTATCACAGGACGATGATGTGTTAGCGAAATTAAAGGAATCGTCAAAGAAAGTAGCTGCGATGTTAGGGGATGGTAATGAATCCGATTCGGACGGGCATACATTTTACATTCCGTTACAAGGGACAAGTGGTGCAACTGGTAGCAAGTCGGATCAAATTATTCAGGGTGTTGCTGTAAAATTGGGTACCGAGGGACCGGAGGGTCCAAATCAACGGGTCATAATGCACGCGAAACTTGTTACAAAATCAGAAATGGGAACGAATTCAACGCCAATTCCCGAATCGATGGCCAACGTCCATGAGATTGTAAAGAGTTTGATAAGTGCTAAGGAAGCGGCAACGGGCAGTTCGAAATCGGTACCGGTCGGTACGGTACAACCCCGTTTCAAATCCCATGACATAACAGCACCATCATCATCCACCCAACATCCTCAATCCTCATCATCAGCCGGCGCTTTAACGCGACACAATTCCAGTCAATCATTATTTTCGCAGGTGAGTAAGACAACCGGTCCCCGGCAGCCACGATTCAAAAACGATGAACCGATCAAACCGAGCAACAATACCGCTTTTCCACGGCACGATGATCCCGCACAAATGGTCGATGCGCCCACGTTTCGACCCACCGAAAAGGAGTTTCAGGATCCAATTGAATTCATTGAACGGATAACACCGATTGCGGCCCGATTCGGTTTATGTCGCATCATTCCACCGGCTAGTTTTAAACCGGAATGTAAAGTGTCCGATGATATGCGATTCACTGCCTACAATCAATACGTACATAAGATGCTGCATCGATGGGGTCCCAGCGCCAAAGAGTTGAGTGCAATTAAGAAGTATTTGGCCACCCAAAGTATAACGCTTGTCCGGCCACCATGGATCGGTGGTATGGAAGTTGATCTACCGAGACTCTATCATACCGTACAGGAGTTGGGCGGGTTGAAGGAGGTGATTGAAAAGAAAAAATGGGCTCGAGTTGCTGAAGAGATGTGCATACCGAAATCGGCACAAGATCGAGTCACAAAACTCGATGATATTTATTGTAAATATCTGTTACCGTACGATACATTATCACCGGCTGAAAGACAGAAGTTATTCGATGAGGTGGAAGCGGATTGGGCGAAAGTGGAAGCGAAAGCTCGCCGTAATGCGGATCGGACAACGTTAAGTGATGATCAGGCGAGCAACGATGAATCGGAAGATGATTCGGATGAGGAGGGTGACGGTGGTTCAATGGAATGTATTGTTAAGGGTAGAGGGATGCCGCTTAGCCAATTCTTTCGCATCGCACGCAATACAATGGCTTTATGGTTTAAAAATACCGAACCAACGTCGTCCGAAATTGAATCGGAATTTTGGCGTCACGTTGCCGTACGCGATAGTCACGTATGTGTTCATTCGGGTTCAATTGATTCAAGTGGCTGGGGTTATGGTTTCCCAACGCCCAGCGGCAATAAATCAAAAGGTGCTAATTCTACATCGTGTGCAAAGCATGCATGGAACTTAAAAGTGTTGACCAATAATCATAATTCAATATTACGGTCCATTGGACCGATAACCGGTGTTACCGTACCAACGTTACACGTTGGGATGCTGTTCAGTGCTTGTTGTTGGTATCGGGATCCACATGGATTACCGTGGATCGAATATTTACATACGGGCGGTAGTAAATTATGGTATGGTGTACCGGATGAACAAAGTACAAATTTCCGAGCTGCATTTACATCACTAGTGCCGACACATTGTCAAAATAAAACGGTTTGGTTACCGTGCGATACGGCTATGGTACCGCCACACATGCTTACCGATCGAGGTGTTTCATTATGTCGAACCGAACAACTGCCGGGACAATTTGTTGTCGTTTTTCCACGCGCTTATACATCCAGTTTATGTACCGGTTATTCTATATCGGAAAGCGTTTACTTTGCAACCAGCAGTTGGTTGGAAGCAGCTAAAGATGATTTTAAAGATATTCACGATAGTTGTGAGCCAGCATTATTTTCATTGGAACAACTTTTATTTGCAATTGCTGAAGATTCGAGAACCAATTGTGAGACATTGTCACAAATTTTACCGATGATAAATGAAGTGTATGAAAAGGAGCTGGCTGAACGGAATGATATTAAGTCGGCTGGCATAACGATCACCGAGAAAATATTACCGAAAGGTAAATCAAAAGGTAAGGCGGAAGATTGTGAATGTGATACGTGTCGAGCGAATCTATATATATCATGGATTCGTACCGAAGATGATAATTTGTATTGCTTACAGCATGCACTACAATATTTAAAAAGGAGTCGATTAGAGGCCGGTCAATGTAAGTTAATTATTACCTATAATTCTGAGGACATTGCAAATTTAATAGATAAAATTAAGGATAAAATGTTGCAATACAAAAAGAAGTCAACGGCAAAAAAGAATGGTAAATGA
- Protein Sequence
- MNAKVDKNNINWEHVMGKLGLGDMNENRELVEPDPTGYDKLMEEQRQLDIIKQLANKDVHPPKVTKSDDKSVLRDSTSRAVMGNMLESNLKRETDMANSIKIHVGVKTTPQSSSTLIQPPKKDIDEKPVKKITNEPVKQPSTVISKPTITPSPSSSSLIGKSRVTSTTTSDKISPDNKKLPIYNQRRTPVYKPITPPKTSDLVSKAKDVVNTFGAFSPENEPSIYSFDKEDEVIAPTTTPFRRQGRRESESKRDESTAKSQSNVDDTSPKSQKSQQQQQQQPPQVSLTLSPDDNAKSASIAVQLSQDDDVLAKLKESSKKVAAMLGDGNESDSDGHTFYIPLQGTSGATGSKSDQIIQGVAVKLGTEGPEGPNQRVIMHAKLVTKSEMGTNSTPIPESMANVHEIVKSLISAKEAATGSSKSVPVGTVQPRFKSHDITAPSSSTQHPQSSSSAGALTRHNSSQSLFSQVSKTTGPRQPRFKNDEPIKPSNNTAFPRHDDPAQMVDAPTFRPTEKEFQDPIEFIERITPIAARFGLCRIIPPASFKPECKVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSITLVRPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKSAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKVEAKARRNADRTTLSDDQASNDESEDDSDEEGDGGSMECIVKGRGMPLSQFFRIARNTMALWFKNTEPTSSEIESEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPTPSGNKSKGANSTSCAKHAWNLKVLTNNHNSILRSIGPITGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGGSKLWYGVPDEQSTNFRAAFTSLVPTHCQNKTVWLPCDTAMVPPHMLTDRGVSLCRTEQLPGQFVVVFPRAYTSSLCTGYSISESVYFATSSWLEAAKDDFKDIHDSCEPALFSLEQLLFAIAEDSRTNCETLSQILPMINEVYEKELAERNDIKSAGITITEKILPKGKSKGKAEDCECDTCRANLYISWIRTEDDNLYCLQHALQYLKRSRLEAGQCKLIITYNSEDIANLIDKIKDKMLQYKKKSTAKKNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -