Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027564815.1
Location
JANTOP010000002.1:15391-22414[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.5e-25 1.8e-21 76.4 0.0 2 89 229 312 228 312 0.95
2 2 6.8 1.9e+04 -3.8 0.0 53 67 1136 1149 1130 1163 0.55

Sequence Information

Coding Sequence
ATGGTGTCCCGGGTGGAAAAATCACCACCAAAAGGGTCTCAAAACCAACAATTAATTGTTACAACATCCACCGTTGAACCGACGCCATCCCTTCGTCCTAGCGGTGGTGGTTTAGGTGTCGGTACAGCTCCCTTATCAGCGTTCATAAGTAGCGTTGATTTGGATGGAGATATCGGAACAACCAGACCGTTAACCCGATCCCCAATCGATGACATTGACGACTGTGTGTCCAGTTCAAGTTGTCCAACCGAACAAACGGGAAAACCACCAGCCGGACCGCCACATGGCCCACAAACCGGATCCCAACAGACAAAGACGCCATCCGATTCGGTGGTTACGGTTGTTTCGACCACAACACCATCGGATCCGGGCGAGGAACGGGATGAGGTATCGGTGGCCGCAACAAAACGTTCAATTGGCGGTACGGGGTCGTATCGACCAATGAAAACGAGTGAATTTGAATTTCAGGTGCCACCAGAAGCGCCCGTCTTTCAACCAACCGTTGAGGAATTTCAAAATCCACTCACTTACATCAGTAAGATCCGGCCGTACGCTGAGAAGTATGGGATTTGTAAGATCAAACCGCCAGCGTCATGGCAACCTCCATTCACCGTTGACGTGGATAACTTACGATTCACACCTCGTGTCCAACGTTTAAACGAATTGGAAGCGAAAACTCGCGTTAAATTAAACTTTCTCGATCAGATAGCTAAGTTCTGGGAGCTGCAGGGTTCATCCCTTAAGATACCGATGGTTGAACGGAAGGCGCTCGATTTATATTCCCTTCATCGAGTCGTTCAGGAGGAGGGTGGGTTGGAGCAGACAACCCGAGACCGGAAATGGTCTCGTGTTGCGCAACGACTAAATTATCCGATCGGAAAGAACGTGGGAACGATATTGAAGGGTCACTACGAACGGATTCTCTATCCGTTCGATATTTATACGTCCGGAAAAGTGGAGGAGTTGACGAAGAAAAGTCCGCCGAAGTTAGAACCGGACATCGATGACCATGACTACAAACCACACGGTATTGTGTCCCGGCAGAATGTTACGCCACCAAATGAGACAACAGCCCGCCGATCGAAACGGTTCCAGCAGCAACAAGAGACAACAATTGATATGGATACCGATTGTAAGTCATCGCCACCAAAATTTGAATTTAAGAAACCGTTTGGAGCTGAACTGGACGTAAAATCCCAAGAAATCTGTGACTTGACTTCTATCCAAACACCACCCACCGAAAAATCGATATCGCCGGCTGAAATGCGACGTCTCCAAATATCTGGTGCCGGTCCGAAAATGGCTGGTTTCCGGCAATCACCCGGTAAATCTCGAATGTCGACTGGCGGCGGTACAACACCGCCCACCACTCCCCCAAAACGACAATTCATTCCACGTCGACACATAAACGATCCGCTGGCTAAGTATGTCTGCCAGACGTGTATGCGTGGCGATGGGGAAGAATCGATGTTACTGTGCGATGGTTGCGATGACAGCTACCACACATTCTGTCTGATACCGTCGATGACCGATATACCGAAAGGGGAGTGGCGGTGTCCGAAGTGTGTCGTTGAGGAGGTGAACAAACCGACGGAAGCGTTCGGTTTTGAGCAGGCACAACGGGAATATACGCTCCAACAGTTCGGACGAATGGCAGATCAATTTAAGGCCGACTACTTTAATATGCCCGTTCATCTTGTACCCACCGCTCTTGTGGAACGGGAATTTTGGCGAATTGTATCGTCCATTGATGAGGATGTGGCTGTCGAATATGGAGCCGATTTACATACTATGGACCATGGTTCCGGGTTCCCAACGAAAAGTTCATTATATCTACAGTCCGCTGACGATCAGGAGTACGCTGAATCTAGCTGGAACTTAAATAATTTACCGCTCCTCGAGGAATCGATTTTAGGTTACATAAACGCTGACATATCCGGTATGAAAGTGCCATGGATGTATGTGGGCATGTGTTTTGCGACATTCTGCTGGCACAATGAGGATCACTGGAGCTACTCGATCAACTACTTGCATTGGGGCGAATCGAAAACGTGGTATGGGGTGCCCGGCAAGAAGGCGGAATCATTTGAGAATACGATGAAACGTGCGGCACCAGAATTATTTCAATCGCAACCGGATCTACTGCACCAATTGGTGACAATAATGAATCCGAACATTTTAATGAATGCTGGCGTACCGGTGTACCGTACCGATCAACATGCTGGTGAATTTGTTATCACATTTCCGAGAGCTTACCATGCCGGATTCAATCAAGGATATAATTTTGCGGAAGCGGTTAATTTCGCGCCGGCTGATTGGTTGAAAATGGGTCGTGAATGTGTCAATCACTATTCAACGTTACGGAGATTTTGTGTGTTCTCACACGATGAGTTGGTGTGCAAGATGGCCCTGGAACCGGACCGATTAAACTTTGGTATCGCAACCGCTTGTTATTTGGACATGGCCGAAATGGTGGACACGGAAAAGAAGCTCCGGAAATCATTGTTGGAATGGGGGGTCACGAAAGCGGAACGGGAAGCATTCGAAATATTTCCGGACGATGAGAGACAGTGTGATGTGTGTAAGACAACTTGCTTCCTATCCGCTGTCACCTGTTCCTGTATCCCAAGTCTCGTTTGTTTACGCCACTATTCCGAACTGTGTAAATGTCCTCCAGACCAGCACACACTTAAGTATCGGTACACCCTCGACGAACTACCGTTTATGCTGCGGAAATTAAAAATTAAAGCCGAATCGTTTGAGACGTGGTTACGAGCCGTTCGGGACGTTATCGATCCAACAAAGAAAGCGGAAATTACGTTGGAGGAACTGCAGGAACTAGCGAATGAAGCGGAAACAAAGAAATTCCCATTATCAGCGTTACTGCAACGTTTGAATAGCGCTGTTTTGGAGGCAGAGAAATGCGTTACCGTTATCCAACAGTTAGATATTAATAAGATGCGTACCCGGACCAGAAACTCGGGCGAATTCCCGAAATATAAACTAACGCTGGAAGAGTTGGATCTGTTTGTGGAGGAGGTGGATAACTTATGTTGTGTCATCAAGGAGGGTAACAGCGTTCGGGAGCTACAACAGCTTGGCAAACAATTCGTTCGGCAAGCTGATGATCTACTTAAGGAACCAATCTATTCCGTTGACCCGAAATCATTGGCTCGGTTAATCGACGATGGACAATCGTTATGCATTGAACTACCGCAACTCGTCCCATTGAAAGTGTTACACGAACAATCCGTTTGGTTTCAAGCCGTTCGAACAGTTCGTTCTAGCGGGGAGAAACTACCTGTTGCCACCGTACAAAAACTCTTCGAAACCGGAATGAATTTAGTGCCGAATCCGGTTTGTGAGAAGCAACTGTTCGAATTGGATGGGATTGTAAAGGATGTGGAACAATGGGAACGGATGGCAAAGCAATGTTTTGAATCCGGAACGGAACAGCAAATCCCTGAGATCGAACAACTCCTACAACAAGCTGATTCAATTGATGGCCAATTAACATCGTATACGATGTTGAAGGATGCGTTGAAACGTGCTAAAGATTGGTTAGCAACCGTTGCCGTTATCCATTCAAATGAGAACTATCCTTACTACCACACGATGGTGAATTTAGTGGCTCGCGGTAAAGCGATACCATTCCAACTAACTGAATTAAAACGGATGCGAGATCATATAGCTGGCGCCCGCCAATGGAAGCAACGTACATCGCGTACGTTTCTAAAGAAATCCGCTCACTTTGCTTTGATGCAAGTGCTATCGCCTCGTACCGATCCCGTTATGTACGCTCGCCCTGGTTCACGGCCCTTAGACGACGATCTACAACAATTCACCGATGCCATGGAACCCGTCCACATGGTTATCTCATTTAAAGCGGCCGAAGAGAAGGAGATGCGTGAGATGCGGGAATTGCGACGTGACAACTTAGCAAAAAATCCGGAACGGGATCAGTATTGCATCTGTCGGCAATCATTTAGCGCAACAATGTTACACTGTCAGCTGTGTAAGGATTGGTTTCACGTCAACTGTGTCCCAACACCACGATCAGCTGGCGCAACCTCACGCGCCCCAAAAGGTTCCAGCCCAAATTTAAATCCCCTACTACCCACCACCTCTCAACTAGAATCAATTACCGGTAGTAAGCCGGCTGACGCCAAGTATCTCTGTCCGTCATGTCAACGATCGAAACGTCCCCGCCTCGAAACAATCCTAACACTTCTCGTTGCCCTACAACGTCTACCCATCCGTTTACCGGAAGGTGAAGCGCTCCAATGTCTCACCGAACGAGCTATGAATTGGCAGGATCGGGCCCGACAAGCTCTATCCACCGATGATGTTGTAGCCGCGCTAGCTGTCCTATCACACATGTCATCCGATGTTGGGATGGTGGCCGGGAAACGGGTACCGCTACCAGGTGCCGCAAAACAAATGAGCGGCGATACAACGGATGATAGTGATACGGGAGATGGATTGATTGGACCAGCTACAAATCGAACAGTTGGCGAGGATTCAACGGGATCGGCAGATAGCCGAACATCACCAAAAAGAAACATTGATCACGCTTATTCAGTTCCTCTGGCTGATGCCAGCACCCCATTTACCCCAATCACCGGTTCAAATGGACGTGGTGAACGTAAAGTATCAACATCATCCACACAGCCACCGGTAAAACCAGTTGATGGCGTTACAATCGGTCCATTATCTGATTCGCCATTGATCCGTTTGAATGCGGAAACAAAGGAGTATTTGGAGGAGTTGATGATGGAGGGTGATCTGTTGGAGGTGTCGTTAGATGAAACGCAACACTTATGGCGAATATTAAATGCAGCTAAACCGAGCGGATCCGATTTAGCGTTCATTAAATCAACGTATAAAATTAAGTCTGATAATTGTTCAACGCTAGTCACCGACACCGTCGGCCAACAAAAAGCTACCGTTGCGACCGCAACAAAACGTACCGCCCTACCAAAGTCAATAGGGACCGATCCAGCAATGTCACCAGATTCGGTGGACGCACAACCGGCCACGAAACCAAAACGTAGCCGAAAGTTAAAATTAACGGCAAAGGATGAGGTACAGCGGCCCGGAACCGACGGTCCCGTACAAAAGAAGAAGAAACGGGGTCGGAAGAGTAATGCAGCAATTCATGCGATTGATAAGCAAGTTGGGTCGTCCGATGATGATGAGGAGTGTAGTGCGGTTAACTGTCAACGACCAACTGGTCGTGAAGTAGATTGGGTACAGTGTGACGGTTGTAATAAATGGTTCCATATGCTATGCGTCGGCTTAAATAAAAATCAATTAAAACCAGACGAAGATTACGTCTGTAAATTATGTGCTAAGGAAGCTAGTGGTGGCGATCCGAGTGTGGATAAACCAATATCCGGTACCGTTCCATTAGCTACAAGCGGTCCAGATAGTGCCGACGATGAAATGGATAGCATTGATTTGAATGCATCACAAATTGGTACAAGTAATCGTGGCGAGACGAAGTCTGGCCGGAAATCAATTACGAAAACAAAAATTGGTGGTGGTGGTGGCGGGAAAAAATGA
Protein Sequence
MVSRVEKSPPKGSQNQQLIVTTSTVEPTPSLRPSGGGLGVGTAPLSAFISSVDLDGDIGTTRPLTRSPIDDIDDCVSSSSCPTEQTGKPPAGPPHGPQTGSQQTKTPSDSVVTVVSTTTPSDPGEERDEVSVAATKRSIGGTGSYRPMKTSEFEFQVPPEAPVFQPTVEEFQNPLTYISKIRPYAEKYGICKIKPPASWQPPFTVDVDNLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRVVQEEGGLEQTTRDRKWSRVAQRLNYPIGKNVGTILKGHYERILYPFDIYTSGKVEELTKKSPPKLEPDIDDHDYKPHGIVSRQNVTPPNETTARRSKRFQQQQETTIDMDTDCKSSPPKFEFKKPFGAELDVKSQEICDLTSIQTPPTEKSISPAEMRRLQISGAGPKMAGFRQSPGKSRMSTGGGTTPPTTPPKRQFIPRRHINDPLAKYVCQTCMRGDGEESMLLCDGCDDSYHTFCLIPSMTDIPKGEWRCPKCVVEEVNKPTEAFGFEQAQREYTLQQFGRMADQFKADYFNMPVHLVPTALVEREFWRIVSSIDEDVAVEYGADLHTMDHGSGFPTKSSLYLQSADDQEYAESSWNLNNLPLLEESILGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGESKTWYGVPGKKAESFENTMKRAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSTLRRFCVFSHDELVCKMALEPDRLNFGIATACYLDMAEMVDTEKKLRKSLLEWGVTKAEREAFEIFPDDERQCDVCKTTCFLSAVTCSCIPSLVCLRHYSELCKCPPDQHTLKYRYTLDELPFMLRKLKIKAESFETWLRAVRDVIDPTKKAEITLEELQELANEAETKKFPLSALLQRLNSAVLEAEKCVTVIQQLDINKMRTRTRNSGEFPKYKLTLEELDLFVEEVDNLCCVIKEGNSVRELQQLGKQFVRQADDLLKEPIYSVDPKSLARLIDDGQSLCIELPQLVPLKVLHEQSVWFQAVRTVRSSGEKLPVATVQKLFETGMNLVPNPVCEKQLFELDGIVKDVEQWERMAKQCFESGTEQQIPEIEQLLQQADSIDGQLTSYTMLKDALKRAKDWLATVAVIHSNENYPYYHTMVNLVARGKAIPFQLTELKRMRDHIAGARQWKQRTSRTFLKKSAHFALMQVLSPRTDPVMYARPGSRPLDDDLQQFTDAMEPVHMVISFKAAEEKEMREMRELRRDNLAKNPERDQYCICRQSFSATMLHCQLCKDWFHVNCVPTPRSAGATSRAPKGSSPNLNPLLPTTSQLESITGSKPADAKYLCPSCQRSKRPRLETILTLLVALQRLPIRLPEGEALQCLTERAMNWQDRARQALSTDDVVAALAVLSHMSSDVGMVAGKRVPLPGAAKQMSGDTTDDSDTGDGLIGPATNRTVGEDSTGSADSRTSPKRNIDHAYSVPLADASTPFTPITGSNGRGERKVSTSSTQPPVKPVDGVTIGPLSDSPLIRLNAETKEYLEELMMEGDLLEVSLDETQHLWRILNAAKPSGSDLAFIKSTYKIKSDNCSTLVTDTVGQQKATVATATKRTALPKSIGTDPAMSPDSVDAQPATKPKRSRKLKLTAKDEVQRPGTDGPVQKKKKRGRKSNAAIHAIDKQVGSSDDDEECSAVNCQRPTGREVDWVQCDGCNKWFHMLCVGLNKNQLKPDEDYVCKLCAKEASGGDPSVDKPISGTVPLATSGPDSADDEMDSIDLNASQIGTSNRGETKSGRKSITKTKIGGGGGGKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-