Basic Information

Insect: Sylvicola fuscatus
Gene Symbol: stc
Assembly: GCA_026546915.1
Location: JANSTS010010886.1:37750-41252[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 1.4e+04 -4.2 1.6 15 19 450 454 449 454 0.81

2 12 0.091 6.5e+02 0.2 0.4 4 10 483 489 482 491 0.94

3 12 4.3e-05 0.3 10.8 19.5 3 19 496 512 485 512 0.86

4 12 0.024 1.7e+02 2.0 12.5 1 18 548 565 542 566 0.86

5 12 3.4e-06 0.024 14.3 14.8 1 19 606 624 596 624 0.91

6 12 1.1e-05 0.078 12.7 13.1 4 18 672 686 665 687 0.88

7 12 0.0085 60 3.5 8.2 1 11 727 737 727 738 0.95

8 12 1.7e-09 1.2e-05 24.9 13.3 1 18 754 771 754 772 0.97

9 12 0.39 2.8e+03 -1.8 0.8 6 10 801 805 800 806 0.79

10 12 2 1.4e+04 -5.7 10.4 7 18 816 828 808 829 0.79

11 12 1.1e-05 0.081 12.6 10.0 1 16 865 880 865 890 0.92

12 12 6.7e-07 0.0048 16.6 11.3 4 19 899 916 897 916 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	1.4e+04	-4.2	1.6	15	19	450	454	449	454	0.81
2	12	0.091	6.5e+02	0.2	0.4	4	10	483	489	482	491	0.94
3	12	4.3e-05	0.3	10.8	19.5	3	19	496	512	485	512	0.86
4	12	0.024	1.7e+02	2.0	12.5	1	18	548	565	542	566	0.86
5	12	3.4e-06	0.024	14.3	14.8	1	19	606	624	596	624	0.91
6	12	1.1e-05	0.078	12.7	13.1	4	18	672	686	665	687	0.88
7	12	0.0085	60	3.5	8.2	1	11	727	737	727	738	0.95
8	12	1.7e-09	1.2e-05	24.9	13.3	1	18	754	771	754	772	0.97
9	12	0.39	2.8e+03	-1.8	0.8	6	10	801	805	800	806	0.79
10	12	2	1.4e+04	-5.7	10.4	7	18	816	828	808	829	0.79
11	12	1.1e-05	0.081	12.6	10.0	1	16	865	880	865	890	0.92
12	12	6.7e-07	0.0048	16.6	11.3	4	19	899	916	897	916	0.93

Sequence Information

Coding Sequence: ATGGCTGAATACAATCCAAATGGCGAGCAATACTATGGCGGTGGCGACGGATACATCAACTTCAATCAATTCGTATCTCAGCACAATCTCAGCCAGTATTACCCACCTCAACAACAGCCGTTTAATAATATGATGTACATTACGTCTCAAAATCAGCAAGATTTTAGTCAGGGAAACAGTTATTTTAACTCTGCGCCTTATCAGAACTTTCCACTGGGGGAAAACTTTGATGCGCACCTCGCTGAAGCTTCGAATCTACATCCTACTGCATCGGAATTTGTGCCGCGGCATTACAATCCTGAAACAACTTATATTCCTGATGCCTTTCTACCCATCGACCATTACCAGCTGCCGCCTTTGGATCTTAATGCAGCTACCATTCAAGAAAATGCAATTGATACCGCTAAAGAAGATACAATAGATCGAACAATAGCGAAGCCCAAGAACACGGGAACTGTCAAAAAGAATCCGGCTGAAGCCATATGTGAACGCCCTAGTGAGACATCAGAACACTCTAATGGGCCGACTAAAAACGATCGAAATGGGCGACATGTTAAACCTGTGGGTAGTGATAGACATGGGCGATTTGATCGATCAGAGCGTACTGACCAATCGGCAGGTAATGAAAGACATGGAAATGAAAGACAAGGGCGTAATGATAGGTCAGAAGGACGCCATGATCAGTCAGCTGGGAATGATCGACATGGACGCCATGATCAGTCAGTGGGAAATAATCGGCATGGCCGCAATGAACGTTTGGAGCGCTATGATGACATGAATGCCCGAAAAGAACGCTCCGAACGTAATGAATCAACCAACGGATATGGACGTCAAGATCGACAATTTGGAAATGGACGAAATGATCGTCGCAACGGGCAAGGAAACACACGCTGGAGAGATGATGCCACCAACCACCAAGCCAACTCAGGGCCACAAAACAACAACGGTAATCCATTCCGACGTCGTAAAATGGATGAGTGGTCGGCTCCAGATCAAAGAAAACGCAACGACGACGATAAAAACGATAATTGGCGCAAAAATGCTACAACTTCATCGAAACCAAAGTCAGATGAGGCATCCGCCAACAACAGCAAACAACCATCACTATCAAATTTTAAAGCTGATCGTAATCTGAAAAAGGTTGTTGACAATGTTAACACGGAAAAGTACTCGCAACGAGAGAAACTAATACAGGAAATTGATGCTGGAAAACTAGAGTGCCTTGTCTGTTGTGAGAAAATAAAACCATTTCAATCGACATGGTCGTGCATCAACTGCCATCACATTTTCCACTTGAATTGCACAATAAAGTGGGCGGCGAGTTCAAAGTCGGAGGACGGCTGGCGTTGTCCCGCTTGTCAAAATGTCACGAAAAAGGTGCCACGCGATTACTACTGTTTCTGTGGCAAACTGCTCAATCCCCAGTACAATAGAAATGATGTGGCGCATTCCTGTGGCGAATTGTGCGGCAAGAGTGAATTGTGCGTGCATCCCTGCACTTTGTTGTGCCACCCTGGTCCTTGTCCACCGTGCCAGGCGAACGTTACACGCGAGTGTGGCTGTGGTCGGCAGAAATCCGTGATGCAGTGCTGTGTTAGAACAGAGGTGAAATGTGACGAAAAGTGTGGAAAACCCCTAAATTGCCAAATACATTTTTGTGAATCCCAATGCCATCCGAAAGAGTGTGGTAATTGCGAAGAAAAGGTTACACATGAGTGTTTCTGTGGCAAAGAAAAGCGTGATGAAGATTGCACCGTGGAGAATAACGAGACGGTGACATTTAGCTGCGGAAAAATCTGCGAAAAGCAGCTTCAGTGCAAGAATCATTTTTGCAAAGAAATCTGCCACGCTGGTGACTGTGCCCCTTGTCCAAGTATGCCCGATTTGGTGACATCCTGTCCATGTGGCAAAGCTCCCATAAATACTGGCGATCGTATGAGTTGTACTGACGCCATACCAGTGTGCGGCGCAGGATGCGGTCGTCTTTTGAAGTGCGGTCCGCCAAGTGCTCCACATCGCTGTTCTTCACGCTGTCACATTGGCGAGTGCCCTCCCTGCAATCGGGAGACAGCCGTGAAGTGCCGCTGTGGTCACATGGATCAGATGATGAAATGCAAATTGTTGAGCACACGCGCAGACGACGCCCGGTGCAAGAAGCGATGCACCAAACGTCGCAACTGTGGCAAGCACAAATGCAACCAAGACTGTTGCATCGACATCGATCATGTGTGCCCAATCCAATGTAATTTCACTCTGTCCTGTGGCAAACACAAATGCAATCAAACGTGCCATAAAGGCAAATGTTTGCCATGCTACCGGACATCATTTGATGAGCTGCACTGTGAGTGTGGCGCCGAAGTTATTTATCCACCCGTACCGTGTGGCACCAAGAAACCTGCTTGCCAGCGTCCGTGCTCACGCACCCACCCGTGCAACCATCCAGTTCAGCACAGCTGCCACTCGGCAGCCAATTGCCCACCTTGCATGGCGTTCACGACAAAGTATTGCTACGGCAAACACGAACAACGCAAAACCATCCCCTGCACTCAGGAGTCGTTCAGCTGTGGTCTGGCCTGCAATCAAGCACTTCGTTGTGGCCGGCACAAATGCATCCGCATATGTCACGAGGACGCATGCGAAGCGCCCGACGACATTTGCAAACAAAGTTGCACCAAACAAAGGATGGGCTGCGTTCACAAGTGCGCGGCGCCATGTCACGAGGGCGATTGTCCAGATATTCCGTGTCGCGAGTCCGTGGAAGTGACGTGTTTGTGTGCCAATCGCAAGCAGACCAGAAGCTGTCATGATTTCTCTCGAGACTATCGCAGAATCGCGACCGCTCAGTTGGCGTCCTCGATGCAGGAGATGCAAAGTGGCGGCTCAGTGGAATTGAAGGATATTTTTGGTCCAGTGAAGAATACAAGCACAAAAACGTTGGAATGCAATGATGAATGTGCGGTTCTGGCGCGCACGCAGCGCATGGCCATCGCATTGCAGATCCGTAATCCGGACAATGCTTCCAAATTTCAGCCCAAGTACTCTGATTTTATTCGCTCATGGGCTAAAAAGGACCCGGCGCTGGTTAATATGATCCACGACAAGCTAACGGAACTTGTGAAACTGGCAAAAGAGAGTAAGCAGAAGTCGCGCAGTCATTCTTTTCCTGTCATGAAGCGGGACAAACGCCAATTGGTGCATGAGATGTGCGACATGTTTGGCGTGGATTCCGAGGCATATGACGCAGAGCCAAATCGAAATGTTGTTGCCACCGCACAAAGGGATCGCTCGTGGCTGCCATCGATGAGTATCATGGAAATAATGGCTCGCGAAAGTGGCCGACGTCGCATTCCCGTGCCTAACAACAATGCTTGGGGCCTCAAGAAATAA
Protein Sequence: MAEYNPNGEQYYGGGDGYINFNQFVSQHNLSQYYPPQQQPFNNMMYITSQNQQDFSQGNSYFNSAPYQNFPLGENFDAHLAEASNLHPTASEFVPRHYNPETTYIPDAFLPIDHYQLPPLDLNAATIQENAIDTAKEDTIDRTIAKPKNTGTVKKNPAEAICERPSETSEHSNGPTKNDRNGRHVKPVGSDRHGRFDRSERTDQSAGNERHGNERQGRNDRSEGRHDQSAGNDRHGRHDQSVGNNRHGRNERLERYDDMNARKERSERNESTNGYGRQDRQFGNGRNDRRNGQGNTRWRDDATNHQANSGPQNNNGNPFRRRKMDEWSAPDQRKRNDDDKNDNWRKNATTSSKPKSDEASANNSKQPSLSNFKADRNLKKVVDNVNTEKYSQREKLIQEIDAGKLECLVCCEKIKPFQSTWSCINCHHIFHLNCTIKWAASSKSEDGWRCPACQNVTKKVPRDYYCFCGKLLNPQYNRNDVAHSCGELCGKSELCVHPCTLLCHPGPCPPCQANVTRECGCGRQKSVMQCCVRTEVKCDEKCGKPLNCQIHFCESQCHPKECGNCEEKVTHECFCGKEKRDEDCTVENNETVTFSCGKICEKQLQCKNHFCKEICHAGDCAPCPSMPDLVTSCPCGKAPINTGDRMSCTDAIPVCGAGCGRLLKCGPPSAPHRCSSRCHIGECPPCNRETAVKCRCGHMDQMMKCKLLSTRADDARCKKRCTKRRNCGKHKCNQDCCIDIDHVCPIQCNFTLSCGKHKCNQTCHKGKCLPCYRTSFDELHCECGAEVIYPPVPCGTKKPACQRPCSRTHPCNHPVQHSCHSAANCPPCMAFTTKYCYGKHEQRKTIPCTQESFSCGLACNQALRCGRHKCIRICHEDACEAPDDICKQSCTKQRMGCVHKCAAPCHEGDCPDIPCRESVEVTCLCANRKQTRSCHDFSRDYRRIATAQLASSMQEMQSGGSVELKDIFGPVKNTSTKTLECNDECAVLARTQRMAIALQIRNPDNASKFQPKYSDFIRSWAKKDPALVNMIHDKLTELVKLAKESKQKSRSHSFPVMKRDKRQLVHEMCDMFGVDSEAYDAEPNRNVVATAQRDRSWLPSMSIMEIMARESGRRRIPVPNNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -