Sfus009385.1
Basic Information
- Insect
- Sylvicola fuscatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_026546915.1
- Location
- JANSTS010006333.1:12091-15793[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.87 6.2e+03 -3.0 1.4 14 19 178 183 178 183 0.86 2 17 0.09 6.4e+02 0.2 0.5 4 10 214 220 213 220 0.95 3 17 1.3e-08 8.9e-05 22.1 16.7 1 19 228 245 228 245 0.99 4 17 0.00034 2.4 7.9 15.8 1 18 281 299 281 300 0.97 5 17 1.1 8.1e+03 -3.3 1.8 6 10 325 329 324 329 0.89 6 17 1e-08 7.3e-05 22.4 14.9 1 19 335 353 335 353 0.99 7 17 0.84 6e+03 -2.9 1.0 13 18 376 382 376 384 0.78 8 17 2.2e-06 0.015 14.9 9.5 3 18 390 405 387 406 0.91 9 17 1.8 1.2e+04 -3.9 1.6 5 10 429 434 429 434 0.92 10 17 6.6e-05 0.47 10.2 13.9 3 18 442 457 440 458 0.91 11 17 1.1e-09 7.6e-06 25.5 12.1 1 19 467 485 467 485 0.99 12 17 2 1.4e+04 -5.0 5.1 5 10 513 518 513 526 0.73 13 17 0.46 3.3e+03 -2.1 10.5 9 19 531 541 524 541 0.88 14 17 0.0009 6.4 6.6 6.3 1 12 553 563 553 563 0.96 15 17 0.00013 0.91 9.3 5.9 1 12 634 645 634 645 0.97 16 17 0.01 72 3.2 15.6 4 19 675 690 673 690 0.92 17 17 2.7e-06 0.019 14.6 10.3 1 16 740 754 740 760 0.88
Sequence Information
- Coding Sequence
- ATGAATCCCGTTCAGGGAAAGGGTAACCAAGCCCGTGCCACACAATCCACATCAATGCACGGCGTCGCAAAACAAACCACCAGGAAAGGACCACAGTCCTCATCCGTCGCAACCCAGCCTGAAGTGCAAGACAAATTTTCGGAAGCTCGCTCCGTGCATATGGCTGCCACCAAAAAGCATCTTGAAGGGTATGAATCCAGCTCCGATGAAGAGGAGATTGCTTGCAATGAGATCCTCGACTCAGTGTTCCGCGGTTATGGCAGTGATCGCTCCAGTCTTGAAAAAACATTGAATTTTCTGGAGAACACTTTTCAGTCGGGCGCTGCCTCCTGTCTAATTTGCCTGGGCACAGTTAAACGAGCCGATCCCATTTGGTCATGTGGCAATTGCTTCAACTTTTTTCATCTAATGTGCATTCAGCGTTGGGCTCGCGACAGCCTCGCTCAACGTCAGTTGCACCAGGAAATGGACGGCGGCTACTACACCAATCAGGGTGATTACATACCAAAGAAACGCAAGACCGTCTTATGGGACTGTCCAAAGTGTCGCTTTGAGTATTTTCCGGACGAAATACCTCGCCAATATGCATGTTTTTGTGAAAAAGAGCTGGATCCCAAATACCATCCATGGCTGTTGCCGCATTCATGTGGCGAGCCCTGCTCGAAGCCATTAACACCAGAGTGTGGCCACAAGTGTATGCTTTTGTGTCATCCTGGTCCGTGTCCGCCGTGTCCTCAGATGGCTCAGAAGTCTTGCAAATGTGGTCAGTCACCAATGCGGACTATACGATGCGCACAAATTGATTGGACATGCGGCAAGAAGTGCAAGCAGAAGCTTAAGTGTGGCATGCACGAGTGCAAGGGACCGTGCCACTCCAAAGATGAGTGTCCACCTTGCGGCCAGAAGAGCTTGCGCAAATGCAAGTGTGGTCAACGCGAAGAGGAGCGTTTGTGCTCGGATGTGGTGTGGCAGTGCGAGCGCACCTGCAAAAAGCCGTTTGCCTGTGGGTCGCATCGTTGTGAACAAATCTGTCACATTGGACCGTGTGGTGAGTGTCCAGCCGGCCAGACAAGGTCTTGTCCTTGTGGCAAGAACATCACATCGGCGCCGTGCACTGAGGAGATTGGTCCGTGCGGTGACACATGCATGAAACTGTTACCATGTCAGCTGCATAATTGCCTGCAGTTGTGCCACAAGGGGGAGTGCAGCGCCTGCCTGGTGTTGACCGAGAAGAAGTGCCGCTGTGGCCAGCAGACCAAAGAATTGCCCTGCTCCAAGGTGTTTACTTGCAAGGCGAAGTGCAAGCAAATGCGGGACTGCAAGAAACATCCCTGCAATAGGGTGTGTTGTGACGGCAATTGTCCCGCCTGCGACAAACCATGCGGCAAAACGTTATCATGCGGCCGACACAAGTGCAAGAACCTATGCCACAATGGACTGTGCTATCCGTGTCCAGTAAAATCCAAAGTCAAATGTCGATGTGGATCGACCGTCATTGAAGTTCCGTGTGGAAGGGAACGGAAAACCAAGCCTCCGAAATGCAGCCAGCCGTGTCGTCATCCCTCAAAGTGTCACCACTCAAATCCTCACCGTTGTCACATGAGCGACTGCCCACCCTGCAGCCAATTGTGCTTGCTGCCCAACGACACCACCGACTGCGGTCACATCTGTAAGCAACCGTGCCACGACTCGGTCAAAGTAACCATAACCGACAAGAGCTTCATACCAGCCGGTCCATGGGAGCCCAAGCATGAAATAGTGCAGATGCAAAAGTTGCCGCATCCACAGTGCGTCGAGCCAATAACCGTCACCTGCATTGGTGGCCACGAAACTGTCGAATATCCTTGCTGGAATTCACGTCCCACGTCCTGTGGTCGCGCCTGTTCGCGCCAACTCAAGTGCGGCAATCACGTGTGCACACTTCCCTGTCACAAGGTTAACGATTTGGAGAGCATGCAACAAGACGAGGAGTGCGTCCCGTGCAACGAAGGCTGCGCTGTGGAGCGACCTCGAGGCTGTGTGCATCCGTGCACACGTCCCTGTCATGGTTCACCATGCGCCCCGTGCACTGTGACGATCAAATCACACTGCCACTGTGGACTGTCGCAGATCTTCAACAAGTGCGGTGAGTTGTATGTGGACGAGGATGCCGAACTGGCGGCCGCACGATTCGACAAGTTGAAGAGTTGCGGAAATCGATGCATAAAGAATATTGGATGTGGTCATCGCTGCTCTGCCATTTGTCACGCTGGTCAGTGCACAGATCCGTCAAACTGCAAGAAAAAGGTTAAGGTTTTTTGTGAGTGCAAGTCACGAAAAGTGGAGACAACGTGCGACAAGCAGCGTAACGGTTTTGTTCTGGCTTGTAACGAGAAATGCGACGAGAAACGGACTGAACTGGAGAATGCACAAAAAGAAAAAGTTCGCAAGATTAAGGAGGCCGAAGAAGAAAAGAACCGTCAGGAGCTGGAAGAGTATGAGCAGCGATACGGAAGGAAGAAACTTAGAGAGCGACAGCGTCAACTTATTGACGATCAGGAGCAGAACAATCAATTTAAACGATTGGCCTATTATTCCATTGTTTTGGTTCTTGCAGCGTTTGCCATTACTCTAATTTTTTTCCAAGATTAG
- Protein Sequence
- MNPVQGKGNQARATQSTSMHGVAKQTTRKGPQSSSVATQPEVQDKFSEARSVHMAATKKHLEGYESSSDEEEIACNEILDSVFRGYGSDRSSLEKTLNFLENTFQSGAASCLICLGTVKRADPIWSCGNCFNFFHLMCIQRWARDSLAQRQLHQEMDGGYYTNQGDYIPKKRKTVLWDCPKCRFEYFPDEIPRQYACFCEKELDPKYHPWLLPHSCGEPCSKPLTPECGHKCMLLCHPGPCPPCPQMAQKSCKCGQSPMRTIRCAQIDWTCGKKCKQKLKCGMHECKGPCHSKDECPPCGQKSLRKCKCGQREEERLCSDVVWQCERTCKKPFACGSHRCEQICHIGPCGECPAGQTRSCPCGKNITSAPCTEEIGPCGDTCMKLLPCQLHNCLQLCHKGECSACLVLTEKKCRCGQQTKELPCSKVFTCKAKCKQMRDCKKHPCNRVCCDGNCPACDKPCGKTLSCGRHKCKNLCHNGLCYPCPVKSKVKCRCGSTVIEVPCGRERKTKPPKCSQPCRHPSKCHHSNPHRCHMSDCPPCSQLCLLPNDTTDCGHICKQPCHDSVKVTITDKSFIPAGPWEPKHEIVQMQKLPHPQCVEPITVTCIGGHETVEYPCWNSRPTSCGRACSRQLKCGNHVCTLPCHKVNDLESMQQDEECVPCNEGCAVERPRGCVHPCTRPCHGSPCAPCTVTIKSHCHCGLSQIFNKCGELYVDEDAELAAARFDKLKSCGNRCIKNIGCGHRCSAICHAGQCTDPSNCKKKVKVFCECKSRKVETTCDKQRNGFVLACNEKCDEKRTELENAQKEKVRKIKEAEEEKNRQELEEYEQRYGRKKLRERQRQLIDDQEQNNQFKRLAYYSIVLVLAAFAITLIFFQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -