Basic Information

Insect: Sylvicola fuscatus
Gene Symbol: ECU03_0790
Assembly: GCA_026546915.1
Location: JANSTS010006260.1:70466-82168[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0009 0.056 13.6 2.5 1 23 277 301 277 301 0.92

2 15 0.00089 0.056 13.6 0.3 2 21 493 512 492 513 0.93

3 15 0.0057 0.36 11.1 1.1 1 23 535 558 535 558 0.95

4 15 0.034 2.1 8.6 0.1 1 23 563 587 563 587 0.90

5 15 6.4 4e+02 1.5 0.5 2 23 602 623 602 623 0.78

6 15 3.8 2.4e+02 2.2 0.2 2 21 629 648 628 649 0.92

7 15 1.1 70 3.9 0.1 2 23 824 845 823 845 0.95

8 15 0.075 4.7 7.6 0.5 2 23 859 879 858 879 0.94

9 15 0.00017 0.011 15.9 3.7 1 23 885 908 885 909 0.96

10 15 0.0037 0.23 11.7 3.5 1 23 933 955 933 955 0.95

11 15 0.0011 0.071 13.3 0.4 1 23 961 985 961 985 0.98

12 15 0.24 15 5.9 1.4 2 23 992 1016 991 1016 0.91

13 15 5.5e-05 0.0034 17.4 4.4 1 23 1023 1045 1023 1045 0.98

14 15 0.002 0.13 12.5 3.3 1 21 1051 1071 1051 1076 0.93

15 15 1.5 92 3.5 0.1 1 23 1082 1108 1082 1108 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0009	0.056	13.6	2.5	1	23	277	301	277	301	0.92
2	15	0.00089	0.056	13.6	0.3	2	21	493	512	492	513	0.93
3	15	0.0057	0.36	11.1	1.1	1	23	535	558	535	558	0.95
4	15	0.034	2.1	8.6	0.1	1	23	563	587	563	587	0.90
5	15	6.4	4e+02	1.5	0.5	2	23	602	623	602	623	0.78
6	15	3.8	2.4e+02	2.2	0.2	2	21	629	648	628	649	0.92
7	15	1.1	70	3.9	0.1	2	23	824	845	823	845	0.95
8	15	0.075	4.7	7.6	0.5	2	23	859	879	858	879	0.94
9	15	0.00017	0.011	15.9	3.7	1	23	885	908	885	909	0.96
10	15	0.0037	0.23	11.7	3.5	1	23	933	955	933	955	0.95
11	15	0.0011	0.071	13.3	0.4	1	23	961	985	961	985	0.98
12	15	0.24	15	5.9	1.4	2	23	992	1016	991	1016	0.91
13	15	5.5e-05	0.0034	17.4	4.4	1	23	1023	1045	1023	1045	0.98
14	15	0.002	0.13	12.5	3.3	1	21	1051	1071	1051	1076	0.93
15	15	1.5	92	3.5	0.1	1	23	1082	1108	1082	1108	0.87

Sequence Information

Coding Sequence: ATGTTGAGCGAAGACCTGGATGATACGCATCTTTGTATTAAATGCAAGGAGACAATAGTTGGCATCGAATCATATATTCGACACCGCAAGACGAATTGCAGGGCTGAGGCGAGGCTTCCAGTTAGAGATGTCGATGACGAGCAGGAGTCTCATTCATTTGAACAATTCAATTTTAATCGTGACATCAGAGAAGATAACGAAAAGGAATTCGGTTTTGAAGTGGCATCCAAGGATATCGATCCGCCACCTTCGCAAGAATTCGACGTGCAATATGAATTGGGAGCAGACGTTTTCTTTGAATCTCTTCAACTGCAGAGTAGCTCAAAGAAATCTTCAGTATCATCGAAAAATATTGGTAATCGAATTATGACTAGACAAGGAAAGGCAAAATCTGCCTTAAAAGCTAACAACGACGTTGACTGGATCGAGCCGAGCAATGATAAGTTCTTAAAAGCTGTAAGCGAGACAAGTGGATATAAACAAGTCGGATCTGAATTGTTTGAGATTGACTTTTCTGACGACGAATTACCGATTTCATATAATGACGATGACGAAGATGAGGACACAGATTCTGATAGCTACTTTAATGCTCCGCCACAGACTCACACTGGTGGCAAATGGAAACCAGATGATCGACCAATGGTTATCAGAACGTGGAATGAACAAGACATTTGGGTTGATCATCATGGATTCCAGGAGGATCGTGTTGATAGAACTACTGAAGACGATGACATTCCACCCCCTAGTCATACAAAAGGTAAATGGATTCCCGGAACTAGAATATCAAAACTTAACTACATGTCAGATGAAGAAAAGCGACAATCTGAGTATCGTTGTAATACGTGCAACAGAACTTTTTCTTTGAAAAAAGCTTACGATCGCCATCTTAAATCGAATTTACATGGAAAACATATGCGGCCAGAAGTTGATGACGATACTCTTACGCAAATAAGAAAGTCGAAAATAACAGGTAGCGAAAGATTACGATTGAAACGCATAGAAGCGACCTCAACTGTTGTTAGTGGTGCTTTGGAGAGTGGTAAAAATGATTTTAAAAAAACTCGCAAAAAAAAATTTATAAAATGTCAACATTGTAAATTACGTATTTTTACCAAAAACTACGGAAAACATTTAATTTCACAGTACCACTATATTAAGATGAATGAACAATCTGTCAACTGTTACACGTCCATTCTAGATAACATTGAACTAATTGTAAAACTAGCTCCATATCAATGTCTTTCTTGCCGATTCTACGCACACACTGAAGATACATTTTTGATGCACTGGGATTCGGAATCTCACAGACAATCGACCGCCAAGTTGGCCGGTAAGTTCTGGTGTCAGTTCTGCCGATTTATTTGTGAGAAAGACAGTGAAATGTTCGCGCACCTGAAAAGCGAGCAACATGTTGAGCTTATCAGGGCATTTGGCAAAGACGTTCCCATAATTATTCGAAAAAAGTCATCAAACTTAAAATGTGATAATTGCGATAAAACATTTGAACTGAACTTTGAACTTCTCCGTCATTTAGAGAAATGCGAACCAAAAAGCTTGATAACGCAAAGTCAAATCGATAAAACACTAAAGGATCAGATGCTCTATAAGTGCACATTGTGTAAGATGGTCCTTCGATCACGTGTATTGCTACAACATCACGAAGCCAAAATTCACAATATAAAGACATTCATCTGCGGAGTCTGTGATTTGACGTTTGAAAGTCCCGAGGAGTCTAAGAAACATCGCAGCACACCCGAACATAAATTGGCTTCGGCCAAAATTAGAGAAAGAGATTTAAAACGCAAATGTCCGCACTGTAAATTTGTGGGCGATCCAATTGTGGTAAAGAAACATATCCGCGATATTCATCCCGACCGAAAATCCCAATGTATGTACTGTGGTAATTGGTTTGTCCATTTTCAAGCGTTGAGTAGTCACGTACGAGAGAAACAGTGCGAATTCGACAAGCTCAAGAAGAATGACTCAAAAAACGCAGTTGAAGCGAATTTCCAATCTGCATCGTCCGTAATTAAATGCAAGGACCTATCCACTTTAACTCAAATAATGCAAGCCAAGGAGACTGTAAATAACACGGAACTAATTGAGACAGTAGATTTGGGTGAGATCAACGAACACAGCATGGGAAATTTTGAAGCGGCCGGTAATAGTGGAGCTATTTCCCTTAAATACAAATCTTCCTCTACTGGCGATGAGGATGATGATGTGGCCGCAGAACCAGCACAAACAGTGGTGTTAATAACCCAAGCGCCCCAAATTGATACAAGTAATCTTGATGCAGTGAATGACCATGCCACCAACCAGACAGCGGTGGCAGCAGTAGGAATGACCGTTTGCGTCAGTAAGGATGATGGAAATGTATTAGAAAAGCTTATTCCAAATGAAGAGCAATGTTTGTTCCTTGACGAAAATGGTCGGTACTTTATAGCTGGTGAAACTAAAAAGACGTGGGTGTGCACCGAATGCCCTTTCACAACAATATTGGAGGCTTCGTACACATACCATAAACTAATGCACGATGAAGAAATTGCGAAAAAACAGCCGACTGATAAATTAGAATGTCCCGTTTGTAAAAAACTATTCATTAAGAAAGCTTTAATGTACCATTTGAGACAACACACGAATGAGAAACCCTTCAAATGTGAACTATGTGACAGTACGTTTGTAAGGAGGAACAATTTGACTGAGCACATGCATAATGTACATCATAAGCCAAAAAAAGATGGTACCGTGATGGACAGATGTGGGAAAAGACAGCGACAACCCATTCCCGACCGATTCGAATGTGACATCTGCAAAAAACGCTTCAAAAACAGACATATTCTAAAACAACACGAATTCGTGCATAAAGAAGTGTCCCAATACACTTGCAGTGAGTATGGTTGTTCTTACAAAGCGCGATCACCCTCTGAACTGAAGAACCACCTGTTGACTCATTCGGATGAAAAAAATTGCTCATGCTCCATCGAGGGCTGCACGTACAAATCAAAAACGCCGATGCAAATGAACAGACACATTCTCAACAGTCACGGCGAATGCAAACCGAAATACAGTTGCAGCGAGTGCCCTTCTACGTTCCACAGTGCCAGCCACCTTCGACGACACCAAAATTCTCACACCAAGAATAAGCAGTACAAGTGTCCACACTGCGATTATGCCTGCCAAAATATCGAAAATTTAAGGAAGCATGTCATCAAGACGAAGAAACATCCTGGTAAAAAAATGTACGCCTGTGAAATCTGTGGTGATGGGGTCTTTAGTACGAATTTTCGTCGTGAATTGCAGTCTCATATTTTTGAAAATCATAGACCTCAG
Protein Sequence: MLSEDLDDTHLCIKCKETIVGIESYIRHRKTNCRAEARLPVRDVDDEQESHSFEQFNFNRDIREDNEKEFGFEVASKDIDPPPSQEFDVQYELGADVFFESLQLQSSSKKSSVSSKNIGNRIMTRQGKAKSALKANNDVDWIEPSNDKFLKAVSETSGYKQVGSELFEIDFSDDELPISYNDDDEDEDTDSDSYFNAPPQTHTGGKWKPDDRPMVIRTWNEQDIWVDHHGFQEDRVDRTTEDDDIPPPSHTKGKWIPGTRISKLNYMSDEEKRQSEYRCNTCNRTFSLKKAYDRHLKSNLHGKHMRPEVDDDTLTQIRKSKITGSERLRLKRIEATSTVVSGALESGKNDFKKTRKKKFIKCQHCKLRIFTKNYGKHLISQYHYIKMNEQSVNCYTSILDNIELIVKLAPYQCLSCRFYAHTEDTFLMHWDSESHRQSTAKLAGKFWCQFCRFICEKDSEMFAHLKSEQHVELIRAFGKDVPIIIRKKSSNLKCDNCDKTFELNFELLRHLEKCEPKSLITQSQIDKTLKDQMLYKCTLCKMVLRSRVLLQHHEAKIHNIKTFICGVCDLTFESPEESKKHRSTPEHKLASAKIRERDLKRKCPHCKFVGDPIVVKKHIRDIHPDRKSQCMYCGNWFVHFQALSSHVREKQCEFDKLKKNDSKNAVEANFQSASSVIKCKDLSTLTQIMQAKETVNNTELIETVDLGEINEHSMGNFEAAGNSGAISLKYKSSSTGDEDDDVAAEPAQTVVLITQAPQIDTSNLDAVNDHATNQTAVAAVGMTVCVSKDDGNVLEKLIPNEEQCLFLDENGRYFIAGETKKTWVCTECPFTTILEASYTYHKLMHDEEIAKKQPTDKLECPVCKKLFIKKALMYHLRQHTNEKPFKCELCDSTFVRRNNLTEHMHNVHHKPKKDGTVMDRCGKRQRQPIPDRFECDICKKRFKNRHILKQHEFVHKEVSQYTCSEYGCSYKARSPSELKNHLLTHSDEKNCSCSIEGCTYKSKTPMQMNRHILNSHGECKPKYSCSECPSTFHSASHLRRHQNSHTKNKQYKCPHCDYACQNIENLRKHVIKTKKHPGKKMYACEICGDGVFSTNFRRELQSHIFENHRPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -