Sfus011570.1
Basic Information
- Insect
- Sylvicola fuscatus
- Gene Symbol
- Ogdhl
- Assembly
- GCA_026546915.1
- Location
- JANSTS010014842.1:9558-18376[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0022 0.14 12.4 2.5 2 23 183 205 183 205 0.96 2 22 0.27 17 5.8 3.3 2 22 268 288 267 288 0.93 3 22 0.27 17 5.8 0.8 3 21 298 316 297 317 0.95 4 22 0.01 0.65 10.3 0.6 3 23 362 383 360 383 0.90 5 22 0.96 60 4.1 0.5 3 21 396 414 395 415 0.94 6 22 0.82 52 4.3 0.3 2 23 423 445 422 445 0.88 7 22 0.00033 0.021 15.0 0.9 2 23 486 508 485 508 0.95 8 22 0.0016 0.1 12.8 6.0 1 23 516 539 516 539 0.95 9 22 0.011 0.71 10.1 0.2 1 23 563 586 563 586 0.95 10 22 0.18 11 6.4 0.1 1 23 589 612 589 612 0.94 11 22 0.011 0.7 10.2 0.3 2 23 696 717 696 717 0.98 12 22 0.065 4.1 7.8 4.2 2 23 750 772 749 772 0.97 13 22 0.0077 0.48 10.7 0.5 2 23 781 803 780 803 0.95 14 22 2.5e-05 0.0016 18.5 1.5 1 23 845 868 845 868 0.97 15 22 0.0014 0.09 13.0 2.0 1 23 893 915 893 915 0.99 16 22 0.0024 0.15 12.3 2.5 2 23 924 946 924 946 0.96 17 22 0.00019 0.012 15.7 2.8 2 23 954 975 953 975 0.98 18 22 0.004 0.25 11.5 3.2 1 23 1010 1032 1010 1032 0.98 19 22 0.0016 0.1 12.8 0.0 1 23 1068 1090 1068 1090 0.93 20 22 0.001 0.064 13.4 0.1 2 23 1139 1161 1139 1161 0.91 21 22 3.4 2.1e+02 2.3 0.1 2 23 1186 1207 1186 1207 0.95 22 22 0.00084 0.053 13.7 0.3 3 23 1221 1241 1221 1241 0.98
Sequence Information
- Coding Sequence
- ATGACGGACGGCAATGGAAAGGGCACACATAATAAGGAGGCATTGAATATCGTTCAAGAAGGTGACCGTCTGTCGCTGCGCATCTGCCACGCATGCATCAGCTACTTGAACTCGTGGCAAAGTTTCAAGAATCGTTGTCATGCTGCTCAACGGAAACAACGCAGCTGGTCCGAGCAATGGCAGCAGCAACAAAAGTTCAGTACGTCTGATGAACAAGCGCTAGCCACGCAACAGCTTCTACAGTTGAATACATCAGTAACGACAACCTCAGGCGACAATGAACGTCTCCCATATCAGAAGTTGGAAGACGCATCTGTGGACATCAGCTTTATTAAAAAGGAGCCAGATGATGTCGGCGATGAGAATGGATTGGAAGATGTCAGCGATGTTATTGGACCCATATCAATGCTGGATGATGGTCCGCCGATACTCACTTCATTGGGACTGACACACATCAATCATGTGAATCCATTCAGCTTCCTCAGCACAGAGCTGGGACACGATTCCATCCATCATGATGTCAGCATGGGCGATGTGCCACGTGCACAGTGTACTGTTTGTCACATGAAGTTCTCAAATCGAGCAAATGCCCGTCGCCACGAACGCAATATTCATGGCAAAATATTGAATCCAGTCAGTCAATTGATGAATCATACGAACCCAATAAAGAAGTCAAAGTTGATGGTTCCGCCCCCAACTTACGATTACGATCAGCCCGAACAATATCGACCGCTGCTGGTCGACTCCAAGCTGTCATTCATCAAACGCCACATACCGTTCCTGGATCAATACCAAACAATGACATGTACCTGCTGCAACCGACAGTTCTCGTCGTACAAACTGTTTATGGCGCACATGCGTAAGAAATATTCGACGCTCTCCAAGAACCTGTGCTTCAAGTGTCTGAAGCAATTCCAATCCAAAGCACAATTTATTGCACATTTGAAGAAGAAAAATTGCATCAATTTGTACAGAATCTACAACTCGCTGCCAGATGTTGGCAAGAATCCGTCGCCCTCGCTCGGCTCCAAAACTGGTCCGAAAGCTGGTCCCAAAGAAATCATATCGAACAAGGTGTACGGCTGTAAGTTGTGCACCAAGACGTTCCGCGTGAAAGTGGATTTCCGTTCCCATGTGTACGAGGCGCACGATGATGCTCACAAAACAAATGTGCCCGTGAACGCCTGTTCGTTCTGTTTGAGGCAGTTCGATGACTCAAGCGCCAGACGTCGCCACTACAACAACATGGAGTGCATTGTGTTCTTGGTGTGTGGCACATGTGACACACAGTTTGATAAGCATGCAGATTACATTGAACATGTGTACGCGACACATTTGCAAATGGAGAATGGCACTTTGGTCAGCAATCTGAGCCTGGAGGGCGAAAACTCTTTGAACATGTCACACGAAGAGAACGAATCCGAATTGGAGAAGTCAGGATTTAAACAACCGCAGAGCTGCAAAGTTTGCGGCAAACAGTACAACAATTATTACAATGTGTTGCGTCACATGGAGTCAAAGCATCCAGACCAACTACCATCCACGTATCAATGTCATCACTGTGACGTTGGCTTCTGTCGACAGACTGCGTTGCGTGAGCATTTGATACACGTACATGGTGAGACGGCGCCCAAGCTGCCGACTGCAACGTTCTCCAACATAACCATTGACAAGAATAAACGAAAGTTCACATGCAAGCAATGTGACGCCATTTTTGAGTCCAAAGACATGTGGCTGGATCATCAGGAGAACATTCACTTTAAGTATTCGTGCATGTGGTGTGATCTTGGTGTCATTGATCGCGACCTATTTGAGCGTCACTTGGAAGAAAAACATACCAATCAGGGTCAtgagaattatgagtccgatgatgatggacaagacgacgaggacgtcacaatgtcccgaggcggcattgaacttaatggtaatgatactgcaaatcacggttttgccgatgacgacatgaccatgaacaatgatgacgatttggatgaagacgatgatgatgaagtgatggaagtccaggagatgcccagGAAACGTATTCGATTAGAGACAAACAAGTCGCATCTGCCGGTGCGTGAGTGTCCTGTTTGTCACGTTGTTTTCCATGGAGGCATCGCGCTGGCCAACCATATGCGAACCCATTACAATAATTCCTCTGGAAATGTATCAAATCAATCAATGTCGGTCAGTGCTAATTTGGATCCATCCAAACAAATACGTCTGCCCACCAATCGAATGCGATGCCGCATTTGCCAAAAGCGAATTCATTCAAAGCAGACGTACAAGCGACATATGTTGACCGAGCATCAGATCAAGGATTGCATTTTCATGAGGTGCAAACTGTGTCCGGCCGAGTTTAGCAACGACAAGGGCTTAAAGGTGCACATGTTCCGAACACATAATATTTCTGTTCAGCAAATGGCAATGGATGTGAGTTTATTCCCAACACCGAAGCAAGAGTCAACAGTTCTCTCAGCATCAGAAATGGATGAGACACCGCCAGTAGCTGCTGTGTCCAATCACTTTGAGTGTGACATTTGTCACACAGTCTATCGGAATCGTGAGCAATTGCGCGCCCACAAGCAGACAGTTCATCTGGTTGTCGGCGAAGAAAATGTCGTCAATGTGGACGTTGAAGATGACGTTCAAAAGCCGTTGGAGACATTTTATCAATGTCGCTACTGTATTGAGACGTTCAACTCCAGCAAACGCCTCACTATCCATATGAACACCCACGAACAGCACGACTCCAAAAATAACACCTGCAACGACTGTGGCAACGTCTACAGCACACGTAAATCTTTGTGGGTCCATCGACATAAGAAGCACCCACGTCCTCCAGATCCATCACAATGTGAGGTCTGTCGCAAGGTGTTCTTTGATAAGACCGAATTGTTCCACCACTTGCAGACGCATAGAAATGAAGCTGGACGTGATCAGTTGCAGCGTCTCAATGCTCTAATTGCCCAAAAAACTAAAGTTGCTGCGACGACGGCTGCCGCTACCAACGTTGAAGATTATACATGCCACCTGTGTGGATTGAAGTATTTCGATAAGCGTGTTCTGAGTAAGCATTTGCGCCTTCACGAGATGAATAAAAACGAAGCAAATGAGGATAGTACGGCCAGCGGTGGTGGCAGCGCTCTGCCCGAGTACACTATTCCCTACCAGAACCAAATGGTAAATGGAGAGTATGCATGTGACATGTGCCCAAAAACATTCCCAGCCCTGAGCGCATTGAAGGTGCATCGTGGCTGGCATTTCCGCAGTCCCGACGGCCGTCAAGTCACCGACACAAATAACATGTGGCAACCGGACCAGGGTTCTACTAGTACACCGTACGGCGGCACAAGTGGCGGCAGCAGCTCGCATGGCAAGAAGCGTTGGCGACCGGCTAATCCGCCAGTGTGTCCTTATTGCAAAGCTTCATTTGCAAGTGGCAATAATTTGCGGCGGCACATTGTGGAGGTGCATAAACGTAATGAGGCACGCATGCAGCGTGAAAATGGTGTCAAGAGTCCCGGTGTTGAGGTGGACAAAGAGAATGAGTGTCTGCAGTGCGAGCTGGCGTTTGACACTCGCCTTGAATGGGTGGAACATAAGCTAATGCATGCCAGAAACATGAAGCCGTCGACAACGTTCGAGTGGGGCTGTTCCATTTGTGGTAAATTTGTTACACGCAAGGAGCGCCTTTTGGCACATATGATGGGCCATTTGAAGGAGGATCCTgacaatccgatgcagagtggcaatgagtttgagagcaattcacagagttccatgtctgaggatgcggaaactaatgatcgtcatatgatgccaaatagagaaataattgcaatcaaagttgatgctgacgacgacgatgacgacgacgatgaggacgatgacgatgacgacgaggacgatgatgacgtggacgtggagccgtctgtgaataatgtgaataatggaaacaatttaaatgaagtggattacgatgatgatgacgatgacgatgaggacggtgatgtggatggggaagaggtggacgaggatgatgatgaggatgatgatgatgatgaggacgatgacgagaacgacgacgatggcgatgaaaacacaccgattgttactgaagtgttggcaaaggctgagcttaaatccgatactgatgaggaggacggacgAAGAATTAGGCCGCAAAATTACTCCCATGGACGAAATTGGTGGCGCGTCTGTTCATCCCTAAGTGGCACAAATGCACAATTCATGGAGGATATGTACAACAAGTGGTGTCTGGATCCTGGCGCCGTTGACTCCTCATGGGGTGACTTTTTTCAAGCGCGTGGTGGCCAACGATGTGTCCCGACTCCATCAAAATCTCCTATTCCTTCGGGAATCCTGTCGGAAGTAGAAAAATATTTAACTGTGCATAAAATAATTCGCAAATACCAGAATCATGGACACTTTGTAGCTGATCTGAATCCATTGCTACCAATAAAACCCGCGAAAATCGGGATGGCTGGCGACATTTCAAAGACCTTTAGCGGATCGACAGTCAAACTTCCAGCTACTACATTTGTTGGTGGAACTGAAAATGAATTGCTATACGATGAATTGGTGGCACGTCTTGAGAAAACATACTGCGGAAAAATTGGTGCTGAGTTCTGCCATATTAAAGACCCGGAACAGTATCGATGGATCGCGAAAAAGATGGAAGACCCTAAAGAAAATATTGCATTCACCAAGGAGGATAAGATGCGATTTATGGAAAGAGTTACAGCGGCCACTCTTTTCGAGAAGTTTTTAATGACAAAGTATCCAGCGGAGAAACGGTTCGGAATCGAAGGATGTGATTGCCTTATTCCATCTGTCAAAGAGATCATTGATGTGTCTGTAGGCCGTGGAGTTGAATCTTTTATATTTGGAATGGCCCATCGCGGTAGACTAAACGTATTGATAAATGTATGTCACGCTCCATTGGCAAAGCTTCTTCCATTATTTAAAGGATTTCCATTTGATGTTGAACCAGGTGACGTCAAATATCATTTGGGTATTGCTAAGGAGCATATTCACAGCCTCACAAAGAAATCAGTCAAGTACACCATGATGTCCAATCCATCCCATTTGGAGTGCGTTAACCCGTTGGTTATGGGGCGTGCGCGTGGTGAGCAAACATTGCGTGGAGACGATAGAGGCGAGCGTGTCATGCCAATTCTAATCCACGGAGATGCTGCAATGGCAGCTGAAGGTGTTGTCTATGAGTCAATGTGCCTGGCGAATCTTGAATTTTTCAGTCCCAGGGGATGCATCCATATTGTAGCGAACAATCAAATTGGCTTTACTGCAGATCCACATCAAAGTTGCAGCAGTCCTTATTGCACTGAAGTTGCGAAAATCTCAGATGCGCCAATATTTCACGTTAATGCTGACGATGTTGAGGCCGTCATGAGAGTGAGCCGAATCTCGGCTGAATGGCGTGCCAAATTCAAACAGGATGTAGTAATTGACCTGCTCGGTTATCGGCGGATGGGTCACAATGAAACGGATGAGCCCAGTTTTACCCAGCCGCAAGAGTATATGTTCATCAGAAAACACCCAACAGTCTACGACATTTATAAGAAACAGCTTTTGGACGAGGGATCATTGAATGCGTCTGAAATCGAAGAATCTCGGAAGAAATATGACGAAAAATGTGAGAAAGTCTATCAAGAAACTAAAGACGTTAAAGTTTGCTCAACAGTTGAATTCAATGATTCGCCGTGGCCAGCATTTACCACAGGACGAAGTGCTAGCTCATGTCTTAAAACAGGTGTTCCAATTGAAACGATTAAGTACATTGCTGAGAAATATTCAACTCCTCCAGATGAACCTTTTGTTATTCATAAAAGACTAAAGACCATTTTGGAGGCAAGAATGAAGTTAGCGAAACAAGAACTGGCTGATTGGGCTATTGGTGAGGCTTGTGCCATTGGATCGCTTCTCAAAGACGGAGTTCATGTGAGAATGGAAGGTCAAGACGTGGAGCGCGGAACATTTTCGCATCGACACTACGTTTACCACAATCAAACTGATAAAGATTGCACAATTTGTCCAATGAAAAACATCTTCCCGGATCAAGCACAATTCAGTACGTGCAATGGTCCGCTGAATGAGCTGGCGTGTATGGGATTTGAGCTTGGATACAGCTCAGCTCATCCCAACAATCTGGTAATCTGGGAGGCCCAGTTCGGTGATTTCGTTACAAATGCTCAAGCTATCATTGATTTGTATCTAGCTAGTGGTGAAGCCAAATTCGGACATCAACGTGGATTAGTTTTGCTTTTGCCGCATGGAATGGACGGACAAGGTTCCGAGCATTCGTCAGCGCGAATTGAAAGATTTCTACAGATGAGCTCTGACGATGCTGACTGTGTGCCCAAAAGTGCAGATGATTTCGATGTTCGTCAGTTGGAGTCTATCAACTGGGTAATTGCTAATTGCACGACTCCGGCTAACTTTTTTCACATTTTACGACGCCACATGAAATTACCATTCCGGAAACCGCTTATAATTATGTCTCCAAAGTCGTTGTTGCGGTTGCCAGCGGCACGTAGCAAATTCAGCGATTTTACGGAGGATTCAGAGTTTCAGAGAGTCATACCGGATCCTAATCCACCGCGTTCGCCATGTAAGGTGGTTTTCTGCAGTGGCAAAGTGTATTATGACTTGGCAAAGACGCGAATGGATCGTAAAAAAGAACAAGAGGTTATGCTAATTCGAGTGGAACAAATTTGTCCGTTCCCGTACGATTTGCTGGCCCATGAAATTGCGAAATTTTGCGGCAGCTCTGTGGAGTACATTTGGGCACAGGAAGAGCATAAGAATGGCGGCCCCTATGCTTACGTTGCGCCAAGATTTCAGCGATTGCTTTCCAAGGATATTACTTACATTGGTCGTCATCCGTCGGCGTCTACAGCTTCTGGGAGCAAGGAAGGTCATGAAATTGAGTTGGAAGAGTTTTTGGCAAAATTATTTGGACCAGCGCCACCTGAGCCGACAAATGCCAAGAAAGAGGAACCAAAGCAAAAGAGTGAAACGAAATCGTCTGAGAACAAACCAAAGAAGCTTTGA
- Protein Sequence
- MTDGNGKGTHNKEALNIVQEGDRLSLRICHACISYLNSWQSFKNRCHAAQRKQRSWSEQWQQQQKFSTSDEQALATQQLLQLNTSVTTTSGDNERLPYQKLEDASVDISFIKKEPDDVGDENGLEDVSDVIGPISMLDDGPPILTSLGLTHINHVNPFSFLSTELGHDSIHHDVSMGDVPRAQCTVCHMKFSNRANARRHERNIHGKILNPVSQLMNHTNPIKKSKLMVPPPTYDYDQPEQYRPLLVDSKLSFIKRHIPFLDQYQTMTCTCCNRQFSSYKLFMAHMRKKYSTLSKNLCFKCLKQFQSKAQFIAHLKKKNCINLYRIYNSLPDVGKNPSPSLGSKTGPKAGPKEIISNKVYGCKLCTKTFRVKVDFRSHVYEAHDDAHKTNVPVNACSFCLRQFDDSSARRRHYNNMECIVFLVCGTCDTQFDKHADYIEHVYATHLQMENGTLVSNLSLEGENSLNMSHEENESELEKSGFKQPQSCKVCGKQYNNYYNVLRHMESKHPDQLPSTYQCHHCDVGFCRQTALREHLIHVHGETAPKLPTATFSNITIDKNKRKFTCKQCDAIFESKDMWLDHQENIHFKYSCMWCDLGVIDRDLFERHLEEKHTNQGHENYESDDDGQDDEDVTMSRGGIELNGNDTANHGFADDDMTMNNDDDLDEDDDDEVMEVQEMPRKRIRLETNKSHLPVRECPVCHVVFHGGIALANHMRTHYNNSSGNVSNQSMSVSANLDPSKQIRLPTNRMRCRICQKRIHSKQTYKRHMLTEHQIKDCIFMRCKLCPAEFSNDKGLKVHMFRTHNISVQQMAMDVSLFPTPKQESTVLSASEMDETPPVAAVSNHFECDICHTVYRNREQLRAHKQTVHLVVGEENVVNVDVEDDVQKPLETFYQCRYCIETFNSSKRLTIHMNTHEQHDSKNNTCNDCGNVYSTRKSLWVHRHKKHPRPPDPSQCEVCRKVFFDKTELFHHLQTHRNEAGRDQLQRLNALIAQKTKVAATTAAATNVEDYTCHLCGLKYFDKRVLSKHLRLHEMNKNEANEDSTASGGGSALPEYTIPYQNQMVNGEYACDMCPKTFPALSALKVHRGWHFRSPDGRQVTDTNNMWQPDQGSTSTPYGGTSGGSSSHGKKRWRPANPPVCPYCKASFASGNNLRRHIVEVHKRNEARMQRENGVKSPGVEVDKENECLQCELAFDTRLEWVEHKLMHARNMKPSTTFEWGCSICGKFVTRKERLLAHMMGHLKEDPDNPMQSGNEFESNSQSSMSEDAETNDRHMMPNREIIAIKVDADDDDDDDDEDDDDDDEDDDDVDVEPSVNNVNNGNNLNEVDYDDDDDDDEDGDVDGEEVDEDDDEDDDDDEDDDENDDDGDENTPIVTEVLAKAELKSDTDEEDGRRIRPQNYSHGRNWWRVCSSLSGTNAQFMEDMYNKWCLDPGAVDSSWGDFFQARGGQRCVPTPSKSPIPSGILSEVEKYLTVHKIIRKYQNHGHFVADLNPLLPIKPAKIGMAGDISKTFSGSTVKLPATTFVGGTENELLYDELVARLEKTYCGKIGAEFCHIKDPEQYRWIAKKMEDPKENIAFTKEDKMRFMERVTAATLFEKFLMTKYPAEKRFGIEGCDCLIPSVKEIIDVSVGRGVESFIFGMAHRGRLNVLINVCHAPLAKLLPLFKGFPFDVEPGDVKYHLGIAKEHIHSLTKKSVKYTMMSNPSHLECVNPLVMGRARGEQTLRGDDRGERVMPILIHGDAAMAAEGVVYESMCLANLEFFSPRGCIHIVANNQIGFTADPHQSCSSPYCTEVAKISDAPIFHVNADDVEAVMRVSRISAEWRAKFKQDVVIDLLGYRRMGHNETDEPSFTQPQEYMFIRKHPTVYDIYKKQLLDEGSLNASEIEESRKKYDEKCEKVYQETKDVKVCSTVEFNDSPWPAFTTGRSASSCLKTGVPIETIKYIAEKYSTPPDEPFVIHKRLKTILEARMKLAKQELADWAIGEACAIGSLLKDGVHVRMEGQDVERGTFSHRHYVYHNQTDKDCTICPMKNIFPDQAQFSTCNGPLNELACMGFELGYSSAHPNNLVIWEAQFGDFVTNAQAIIDLYLASGEAKFGHQRGLVLLLPHGMDGQGSEHSSARIERFLQMSSDDADCVPKSADDFDVRQLESINWVIANCTTPANFFHILRRHMKLPFRKPLIIMSPKSLLRLPAARSKFSDFTEDSEFQRVIPDPNPPRSPCKVVFCSGKVYYDLAKTRMDRKKEQEVMLIRVEQICPFPYDLLAHEIAKFCGSSVEYIWAQEEHKNGGPYAYVAPRFQRLLSKDITYIGRHPSASTASGSKEGHEIELEEFLAKLFGPAPPEPTNAKKEEPKQKSETKSSENKPKKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -