Basic Information

Insect: Sylvicola fuscatus
Gene Symbol: ZNF236
Assembly: GCA_026546915.1
Location: JANSTS010013623.1:27442-30861[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.069 4.3 7.7 1.4 1 23 81 103 81 103 0.97

2 22 4.4e-05 0.0027 17.7 1.0 1 23 109 131 109 131 0.98

3 22 0.014 0.87 9.9 3.4 2 23 138 159 138 159 0.97

4 22 0.0064 0.4 10.9 0.6 1 23 165 188 165 188 0.92

5 22 7.5e-06 0.00047 20.1 1.0 1 23 213 235 213 235 0.98

6 22 0.00082 0.052 13.7 3.6 1 23 241 263 241 263 0.98

7 22 1.1e-05 0.00072 19.6 0.7 1 23 269 292 269 292 0.97

8 22 0.00049 0.031 14.4 1.7 1 23 302 325 302 325 0.98

9 22 2.5e-06 0.00016 21.6 0.4 2 23 406 427 405 427 0.96

10 22 0.00063 0.04 14.1 0.9 1 23 433 455 433 455 0.98

11 22 0.83 52 4.3 0.2 1 17 471 487 471 488 0.91

12 22 0.0048 0.3 11.3 4.7 1 23 500 522 500 522 0.96

13 22 8.4e-05 0.0053 16.8 0.5 1 23 528 550 528 550 0.99

14 22 0.0038 0.24 11.6 1.3 2 23 556 577 555 577 0.96

15 22 0.00077 0.048 13.8 4.0 3 23 585 605 584 605 0.98

16 22 3.7e-05 0.0023 18.0 1.2 2 23 787 808 787 808 0.98

17 22 0.0035 0.22 11.7 3.1 1 23 814 836 814 836 0.97

18 22 9.7e-05 0.0061 16.6 1.9 1 23 843 865 843 865 0.97

19 22 0.033 2.1 8.7 0.8 1 23 871 893 871 893 0.98

20 22 0.014 0.9 9.8 1.0 1 23 945 967 945 967 0.97

21 22 8.8e-07 5.5e-05 23.1 0.8 1 23 973 995 973 995 0.98

22 22 0.01 0.63 10.3 0.5 3 21 1003 1021 1001 1022 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.069	4.3	7.7	1.4	1	23	81	103	81	103	0.97
2	22	4.4e-05	0.0027	17.7	1.0	1	23	109	131	109	131	0.98
3	22	0.014	0.87	9.9	3.4	2	23	138	159	138	159	0.97
4	22	0.0064	0.4	10.9	0.6	1	23	165	188	165	188	0.92
5	22	7.5e-06	0.00047	20.1	1.0	1	23	213	235	213	235	0.98
6	22	0.00082	0.052	13.7	3.6	1	23	241	263	241	263	0.98
7	22	1.1e-05	0.00072	19.6	0.7	1	23	269	292	269	292	0.97
8	22	0.00049	0.031	14.4	1.7	1	23	302	325	302	325	0.98
9	22	2.5e-06	0.00016	21.6	0.4	2	23	406	427	405	427	0.96
10	22	0.00063	0.04	14.1	0.9	1	23	433	455	433	455	0.98
11	22	0.83	52	4.3	0.2	1	17	471	487	471	488	0.91
12	22	0.0048	0.3	11.3	4.7	1	23	500	522	500	522	0.96
13	22	8.4e-05	0.0053	16.8	0.5	1	23	528	550	528	550	0.99
14	22	0.0038	0.24	11.6	1.3	2	23	556	577	555	577	0.96
15	22	0.00077	0.048	13.8	4.0	3	23	585	605	584	605	0.98
16	22	3.7e-05	0.0023	18.0	1.2	2	23	787	808	787	808	0.98
17	22	0.0035	0.22	11.7	3.1	1	23	814	836	814	836	0.97
18	22	9.7e-05	0.0061	16.6	1.9	1	23	843	865	843	865	0.97
19	22	0.033	2.1	8.7	0.8	1	23	871	893	871	893	0.98
20	22	0.014	0.9	9.8	1.0	1	23	945	967	945	967	0.97
21	22	8.8e-07	5.5e-05	23.1	0.8	1	23	973	995	973	995	0.98
22	22	0.01	0.63	10.3	0.5	3	21	1003	1021	1001	1022	0.94

Sequence Information

Coding Sequence: ATGGACGATTACGCGGAAAATCTGATCAATAGTGATATTTATACCGCGCGAAATAACTTGGACATCTACGAAAGCAACTTACCTCAGTTTGGAGAGGATTCCGAGTCTCACGATCCCTATTCTCAGAAAGAATCCTTTGATAATAATGATTGCTTACCGATGGTGCCTGTGCCAGCATTAGCTATCAAAGTATCACGTAAACGTAAACGACGAAAACGGGCCAACGGGACAGGCGCAAATTATCATTGCGCCAAGTGCAATGTGGACTTTCAAGAGTATGCCCAGCTACAGGTGCATCGGCAGCAGCACGTGCATCAGAAACCACACAAATGTGATAAATGCCAAGAGTCGTTCAACGTATGGGACAACCTTTTGCTTCACACAGCTACACACAACTCCACCACTCCAGCCGAGTGTCCACGGTGTCACATTTTCTTCAATCGAATTTCCAGCTTTCATGGTCACATTCAAACGCATTTCCAAAGTGAGTATTTTACTTGCGACTTTTGCCAGCAAACATTCAACTTCGAAGCCATGCTGAAGGAGCATGTCGCTGAGAAGCATCCGAATAGGACACCGAAAGTTAAGACGCCTCGTAAAATGAAATCCAAGGAATTTGTTGTGAAAGATAAAAGACATCAGTGCAGTGTATGCCAGAAAAAGTTTGAAAAACCTAGCGGCTTGGAGCGCCATTTACTCATTCATAAGGGTCAGCGGCCGTTCAAGTGCGATAAATGTGAATTCGCATGTAACCAGAAAAGTACCCTGGAGAAACACAAACTTATACACAATGGCATGAAACCATTCAATTGTCCAAAGTGTCCACAACGGTTTAACCAACGAGGCAACCTGAGTCTGCATTTGAAGCGTGTCCATCCTGTTGATGATTTACGAGCGGTGTCCTATCCGTGCAATCATTGCAGCTGTGTGTACAGCAAAATGGGTGCACTCAATGCACACATCAAACGAGTGCACGAAGTCGAAAGTGGAGATGTTGGGATTGACACTGAGCGCATCATCGAACAGTTACAGGATTTGCAAAACGGAATGGAGCCAGCAGCGACAAACTGTCAGTCAGAAGTACCTGCCGTGGATTCAACGACTGACGATGCATCTGCTGATGAGGGTTTCATTCAATTGCAGGATTTGGCTGAAGACGGATCGATCGTTTACCGCCTTGTGAAGAGAATTTTTATTGACAACGAACGATTTCTGGTCTGCGTGGTTTGTTCAAAGAAGTTTCGAAGACCGTCAGACCTGCTGCGACATCTTAAAGTGCACACGAAGGAAAAGCCTTTTGAATGCAATCTCTGCTTGCGTCGATTTGCACTTAAAACCACACTGAGTAATCATTTAAGGGTTCATGAGGCGAAAAAAATTAAAGCTTCAGCCGATGAGAAAACCATTTCCCACGAGTGCTCTCAATGTTCAGCTGTATTTGATACCGAAAAAAAACTCAAGGCCCAAAAGACATCAGACACAACTAAACGTCGACCGCATAATTGTGAGTTCTGTTCCGCGACATTTACAAAGATAAGTCATTTGAAGCAACATGTCAACAGCCACTTGGGACTGAAGCCGTACCAATGCCCAATATGCAACAAGTATTTTGGAAAGAGCAGCATTTTAAACGAGCATATGCTTAAACACCAGTCAAAAGTGATTGAATGCAATCAATGCACATCCAGGTTCTACAATCAGAGCACCTACTTGCGTCACCAGGCCAATCATTCCCAGAATCTGAACATCCTTTGCCCATATTGCCAGAAATCATTCAAATCTAAAGGCTCTTGCAAGTCCCACATCAAATCTCACAAATATGACATACTTAAAGAAATCGTCAGTCAGTCGAATGGCAATTCTACTATTCAAGAACAATTTCTTTCCACTGATGACACGTCAGAACAGCCACACGACAGTATTATGATTCTACAAAATGACGCCTTTCTTCCAACTGCTGCCCAAAATAATTGTATTTTCTTACTCGATTCGTCCGCGAATCTCGATATGCAAGTGCCAAACGACATCAACGACACTGCACCGGATTGTTCCACAAATTTGAATATGACAGACGACAATCCAACTTTAGTTGATCCTGTAATGTGGATGCCGACACCAGAAACCATTCAATCACAGAACGTGATCGTCGGTGATGTTTGTGACATGGAGGATGTTCCAGGTTCTAGTTTTATTGAGGAAAACAATCAACAATACTTTGAATTGATTAATGACTCAAACGAATGCTACCCAATCATGGCGGCCAGCTCAAACCCGAATCCAATGATGCAGGTCGTTCCGAATGTACCAGAAATTATATCAAACGAAAAAGAATTAATTGCCGTGCCCAAACGTGAAAATCGTtgcaacgtctgtgataaaagttttctgaagcttaatgacttgacgcgtcacatgcgagtccacactggagagcgaccgttcgcctgtaacatttgcttcaagcagttcaaacttcagtgcacgctgaatagccatctaagtgtTCACCAGGAACAGAGAACCATCTTCAATTGTCAAACATGCTCAAAGGGATTCACATCACGCAACAGCTTGCGTTTGCACATGTCTTTACACACGGGCAAGCGTCCTTACAAATGCTCTTCTTGTGCTCTGACTTTCCGGACCATTGGAAACCGCAATTCACACGAAAAAGTACATTCCAAAGTAACGACGGCCAAGTCTCGGGCACGACGTCTCAACTGTCAGCAATTAAATTTAATCGACCTGGCTAAAACGGCCAATGACTTCCGCATGGAAGTTTGTGATAATGTCGCACCGGAGGTGAAATGTGTCGTCAAGAAGAAGTTGCCATATTCTTGTTTAACGTGTTTGAAGACATTCGAGAAGAAATCCATTTTGACCAGGCATGAGTTGATACACACAGAAGAGCGTCCGTTTGTGTGTACGATTTGCAATGAGCGATTCAATCAGAAGGCTACCCTATCGACCCACATGAGGATTCATTCTTCGGTTCTGCCCTATGGATGCGACTTTTGTTGGCAAACCTTTCGCTTTAAGGGCAATCGAACCAAGCACATGTTGATTTGTAAAGCTAAAGACCGGATAAGGGAAGATATGGCCTAA
Protein Sequence: MDDYAENLINSDIYTARNNLDIYESNLPQFGEDSESHDPYSQKESFDNNDCLPMVPVPALAIKVSRKRKRRKRANGTGANYHCAKCNVDFQEYAQLQVHRQQHVHQKPHKCDKCQESFNVWDNLLLHTATHNSTTPAECPRCHIFFNRISSFHGHIQTHFQSEYFTCDFCQQTFNFEAMLKEHVAEKHPNRTPKVKTPRKMKSKEFVVKDKRHQCSVCQKKFEKPSGLERHLLIHKGQRPFKCDKCEFACNQKSTLEKHKLIHNGMKPFNCPKCPQRFNQRGNLSLHLKRVHPVDDLRAVSYPCNHCSCVYSKMGALNAHIKRVHEVESGDVGIDTERIIEQLQDLQNGMEPAATNCQSEVPAVDSTTDDASADEGFIQLQDLAEDGSIVYRLVKRIFIDNERFLVCVVCSKKFRRPSDLLRHLKVHTKEKPFECNLCLRRFALKTTLSNHLRVHEAKKIKASADEKTISHECSQCSAVFDTEKKLKAQKTSDTTKRRPHNCEFCSATFTKISHLKQHVNSHLGLKPYQCPICNKYFGKSSILNEHMLKHQSKVIECNQCTSRFYNQSTYLRHQANHSQNLNILCPYCQKSFKSKGSCKSHIKSHKYDILKEIVSQSNGNSTIQEQFLSTDDTSEQPHDSIMILQNDAFLPTAAQNNCIFLLDSSANLDMQVPNDINDTAPDCSTNLNMTDDNPTLVDPVMWMPTPETIQSQNVIVGDVCDMEDVPGSSFIEENNQQYFELINDSNECYPIMAASSNPNPMMQVVPNVPEIISNEKELIAVPKRENRCNVCDKSFLKLNDLTRHMRVHTGERPFACNICFKQFKLQCTLNSHLSVHQEQRTIFNCQTCSKGFTSRNSLRLHMSLHTGKRPYKCSSCALTFRTIGNRNSHEKVHSKVTTAKSRARRLNCQQLNLIDLAKTANDFRMEVCDNVAPEVKCVVKKKLPYSCLTCLKTFEKKSILTRHELIHTEERPFVCTICNERFNQKATLSTHMRIHSSVLPYGCDFCWQTFRFKGNRTKHMLICKAKDRIREDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -