Sfus014107.1
Basic Information
- Insect
- Sylvicola fuscatus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_026546915.1
- Location
- JANSTS010003345.1:3839-7410[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3 4e+03 -2.3 0.1 34 45 201 212 200 213 0.86 2 2 2.3e-13 1.5e-10 40.7 0.1 3 44 663 704 662 706 0.96
Sequence Information
- Coding Sequence
- ATGGTGTCAATTCAGCCCAAGAAGGATGGCAGTCCCAATGCCGAGTTTTTTCAGTCGCCAGAGTCGATGGCTGGCTTCGATGTTGTGCGCCTCTGGTTGATGAAAAATTGCAAGAAATATGTCCAGGCGGAACCTCCAACCAAAGAATCTCTCGCCCAACTGCTGATCATGTTTTTGCAGTATCAAGAGAACAAGTTGGGCAAACAGGCCATTGATCCACCATCGACTCGACTGCCAATGCGCCTGTTCATGGACTTTAAATCCGGCGGCGCCCTCTGTCACATGTTCACCATCATGTATCGCTACAAACAAGATCAAAGGTGGCGCAAGTTTGACTTCACCATCTCCAAGAATCCTGTGCGCAAGGACACCAACACACAGATGCTGCTGGAAATTGAGCAGGCACTCATCGAGGCTGAGTGCTTGCGTCTGCCGGTTGTGTACGTGCGGCCAGACGTCGACAAGGCAATGTCGACAAAGATACGCGAAATCCTGCGTAACCATCAAGCCGAATTGACAGAAGACGAGGACGAGGCGACGCACATCATCTATCCGCACAGTGACCCGGTGGCGGAGGATTTTGCCCGGCCAACATTCAAACAGGACAAGCATGTCATGATGCACTGGTACTACTACCCGGAGTCGTACGATCTGTGGACACCAAACAGCATTGAGCTGCCGGACGGTGTGCCAGATGGACCACAACTTGTGGTGGCGGCTGACCGCTGGCGTGTCACCGCCTCGTGGGTACTGGATCTCGATCAGTACAATGAATGGATGCCCGAGGAGGACTATGAGGTGGATGAGCAGGGCAAGAAGAAGGTGCACAAGTTTCGTTTGTCTGTAGATGAGTTAATGGAACGGTCAAAGAACAAGGCGGGCGGCAGTGGCAGCAAGCAGAAGCGCAAACGTACGCCGTCGCCAAAGAGCAGCAAACGCAAGAGCACTCGTTCACCAGCGGTGTTTTCCAAGAAGTCACGACCCGGTGAGCTGGAGGACGAAGAGGATCTCACTAGAGACATGGAGGATCCAATGCCAGAGATAAATATGGTTGAGGTGACAAAGCCGCCGCCCACGGTGACTGTCACAACCGGCCCGGTGGCGACAACCGCTAAACAGCGGGTAGATCCTGACATGTTGCCATCCAAGGGGGCTGTTCTAGCCGATCTGGACGAAGAAACTGAACGCTGCATCACCGCTTCTGGAGGCGATGATTCTCTTTTTGGCAAACTGTGCAGCGACCATTCGAACAACACACAGGAATTCCAGATCAAAGAAGAGGCTGGACAGGGCGGCCTCGAAGATAACGTCACTGAGCAGACACATCACATTATTGTGCCGTCATATTCCGTGTGGTTTGATTACAACTCTATCAACATTGTTGAGAAACGAGCTCTGGCCGAGTTCTTCAACTCAAAGAACGACTCCAAGTCGCCAGAGATTTACATGGCTTATCGCAACTTTATGATTGACACTTATCGTCTAAATCCGACCGAGTATCTGACCAGTACAGCGTGTCGTCGCAACTTGGCAGGCGATGTGTGCGCCATTATGCGTGTGCACGCCTTCCTCGAGCAGTGGGGTCTCGTAAACTATCAAATTGAAATGGAGACGCGACCCACAGCAATGGGTCCACCGCCAACATCGCACTTTCACCTGCTTAGCGACACTCCGTCTGGTCTGGCGCCATGTCCCACCAAAGTACAGCAGCCGTCCGCTGCAAAGATGCTCTTTGACTTGGACAAGAAACAGAAGGATGGCGAAAATGCGACGCCATCAACATCGGCGACTGCAGCGGCGGCCGCTGTTACAGCTGCCGCAGCGGCGACAGCGGGCCCAAGTGGCGTGACGCCGCTGGCTGCCGTGCCACCAGAGGTGACGGTCAAGACTGAATTCGATCCGTCGGCTACGTACGGTCTGCGCATGGATCAGTACGGCAAGAAGCCGTCGGTGATGCGCAATCGCGGCGCCGCCAGTAGTGTGCGTGACTGGACAGATCAGGAGACTTTGCTGCTGCTGGAGGGCTTGGAAATCTACAGGGACGATTGGAACAAGGTGTGCGAACATGTTGGCACGCGCACACAGGACGAATGCATTCTGCATTTCTTGCGCTTGCCCATTGAAGATCCGTATCTGGATCAGGAGTCGCTGGGACCGTTGTCCAACCAACCGATACCATTCAGTAAATCGGGCAATCCGATTATGTCGACTGTTGCGTTTTTGGCGTCGATTGTAGATCCCAGAATAGCCGCAGCAGCTGCTAAAGCGGCCATGGATGAGTTTGCTATGCTCAAGGAGGAAGTTCCGCCCGGATTCTATTATGTTCATTACAAGAACGTGCAACGGGCAGCCAAAATGGGGAAATTCGATCCGTCGGCAGGATTGTCTGGCAGTGGAATAGCCGGCACTACAGACAAAGCTGACGACGACGAAGAGAAGACTGCAACCGGCGAGGAGGAGCCAAAAGATCCAAACAAAGAAACTGTTCCAGTTGCAGAGAAAATAACCATTAAATCCGATCCAGTGGACGCTGGCGCTGACTTGAGTCCACCAAAAGACATGGACACTTCAACAAATGAGACAAAGCCAACAGAAAACATTGCCACCGGTGACAGTGAGCCGCCTTCTGATGCAGCCAATGGAGCTGGTCCTTCAACCGGAGATAACATTGAGCCCACCGATGATGAGCGCAAAGTATTCAACGAGGCTGAACTGCAAAAGGCGGCCGGAGCTGCGCTGTCGGCCGCTGCTGTCAAAGCAAAGCACATGGCCTCGTTGGAGGAGCGCAAAATCAAGAGTCTCGTCGCACTGCTGGTTGAGACACAGATGAAGAAACTAGAGATTAAGCTGCGACACTTTGAAGAGCTGGAGACAACGATGGAGCGCGAGCGTGAAGGTCTTGagtatcagcgccagcaattgattaccgagcgtcagcagtttcatttggagcagctgaaggcagccgaatttcgcgcccgtcaacaggcacaccatcgcattcagcaggagcaagctcaacagggacaatggcagcaacagcagcagcagcagcagcagcctcaagttgcgaccaccacctgcactgtgacgtcggccactatgtcgccgcaaacgacgacagctacaatgacgtcgaatgcggccaccacaacctcagcggctggagcggctgcagcgtcagctacgatcaatgttgttagccccccaAGTGGGTCGGACGCCAATTCAACTGTTACTGACGGAAATGCTGCCTCGCCGACAGTCGCTTCCCCACCACCAGCCATGCCATCCACTTCTCAGCAGGCGATTGCCGCGGCCAACGCCGCTGCAGCCGCCACCGCTGCCGCCAGCACTGCGACCTCAGCCGGCCCCAATTAA
- Protein Sequence
- MVSIQPKKDGSPNAEFFQSPESMAGFDVVRLWLMKNCKKYVQAEPPTKESLAQLLIMFLQYQENKLGKQAIDPPSTRLPMRLFMDFKSGGALCHMFTIMYRYKQDQRWRKFDFTISKNPVRKDTNTQMLLEIEQALIEAECLRLPVVYVRPDVDKAMSTKIREILRNHQAELTEDEDEATHIIYPHSDPVAEDFARPTFKQDKHVMMHWYYYPESYDLWTPNSIELPDGVPDGPQLVVAADRWRVTASWVLDLDQYNEWMPEEDYEVDEQGKKKVHKFRLSVDELMERSKNKAGGSGSKQKRKRTPSPKSSKRKSTRSPAVFSKKSRPGELEDEEDLTRDMEDPMPEINMVEVTKPPPTVTVTTGPVATTAKQRVDPDMLPSKGAVLADLDEETERCITASGGDDSLFGKLCSDHSNNTQEFQIKEEAGQGGLEDNVTEQTHHIIVPSYSVWFDYNSINIVEKRALAEFFNSKNDSKSPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQIEMETRPTAMGPPPTSHFHLLSDTPSGLAPCPTKVQQPSAAKMLFDLDKKQKDGENATPSTSATAAAAAVTAAAAATAGPSGVTPLAAVPPEVTVKTEFDPSATYGLRMDQYGKKPSVMRNRGAASSVRDWTDQETLLLLEGLEIYRDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLDQESLGPLSNQPIPFSKSGNPIMSTVAFLASIVDPRIAAAAAKAAMDEFAMLKEEVPPGFYYVHYKNVQRAAKMGKFDPSAGLSGSGIAGTTDKADDDEEKTATGEEEPKDPNKETVPVAEKITIKSDPVDAGADLSPPKDMDTSTNETKPTENIATGDSEPPSDAANGAGPSTGDNIEPTDDERKVFNEAELQKAAGAALSAAAVKAKHMASLEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRIQQEQAQQGQWQQQQQQQQQPQVATTTCTVTSATMSPQTTTATMTSNAATTTSAAGAAAASATINVVSPPSGSDANSTVTDGNAASPTVASPPPAMPSTSQQAIAAANAAAAATAAASTATSAGPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -