Sfus000093.1
Basic Information
- Insect
- Sylvicola fuscatus
- Gene Symbol
- bab2
- Assembly
- GCA_026546915.1
- Location
- JANSTS010007857.1:48047-50085[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-14 1.2e-10 40.6 0.0 3 44 359 400 357 401 0.91 2 2 0.11 1.9e+02 1.5 0.6 4 20 509 524 508 524 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGCACCGAAGGACAAACGTATTGCCTGCGATGGAACAACCATAAATCGAATTTGGTTGAAATTTTAGACGCCTTAATCAAAATGGAGAGCTATGTCGACTGCACAATCTATGTTGATGATCATGTGCAGTTTAAAGCGCATCGCGTTGTTTTGGCCGCCAACTCTCCGTATTTTCAGTCTATCCTGCAGGACGTTCCCATGGATCACTGCAGCATTCTGTTTCCCGGCGTGCAGGCATTCGAAATGCGGGCTCTTCTTGAATACATGTACACCGGTGAAGTCAATGTCACACAATCACAGATACCGCGCATCATGAAGATCGCCGAACAACTTGAAGTGAAAGGACTGTTTGATATCACTGATCTCAAAGACAAATTTGACGAATCACAGCCCTTTTCACACTCGACCAACAACAACAGCGCCAACAACAAACAATCAATCAGCCATCAATCATCACCGGTTATTTCAACCTCTACAAACATTTCATGCGCTCAAAGTAGTAGCATTTCACCGAATTACAGCTACAAGTCGCCGTATTCCAACCTATATTCGCGTAGTCCGGCAGCATCAGCGTCCGAACGGATGACTCAGTGGCCATCTCACATGCCATCACCTATGCCACAGCAACACTTGCAAACAGCCGCCGCAGCTATGCTCAGCTCAGTATATGACAGCTCCGACAATCCATTGAAACGAAAAAAGTTGTCATCTATGTCAAGTATGCTGATGTCACGTGATACACCGATCCTCCGAAATGTGCTAGCTCAATCGAATGCCGCCGACTCGTCACAAACACCTCCCGGCCCCATCCCACCGCTTCATCATCACAACATGTCCTCATCCATGAACAACAATGATAGAAACGATAACCAAAGCACAAACAACTCCAACGGCACTGATTACTCCGATATGAAAATGAAATATGAGGAGCCCAACTCTCCATACACCGACAAATCATTCGAAGACGATACGATGGACTCTAGCCAGCATTATTCAGGTGACTCACGGATAGCCCCCTACGTGGCGCAGCAGAAGCCAGAGTGGAAGCGCTACAAGCAATATACTCGCAGTGACATCAATTCCGCCATTGAGCATGTTCGCAATGGCATGAGTGCCCTGCAAGCTTCCCGCAAATTCGGAGTTCCCTCTCGTACCCTGTATGACAAGGTCAAAAAGATGGGCATCACAAGTGGCCGTCCCACTAACCGAACCGTGCGTCGCAGTCCTAGCACTGGCAATCGGCCAGCTGCGTTCCCCTATGGTATCAGTGGCACCAGCAGTCCATTCGGACATCATTTGCCCGGCGGCGAATCTGCTCAGATGCAAGTACGCGGTGGCGACGATTCAGACCGTGAACGCGAGCGCGACCACCATCAAGATCGTGATTCGCGTGATGCTCATCATCTCCCACCGACGATTCCACATTCTGCTGCGGCTCTGTTAGACGCCACATTTTTGCAGCAAGCGCTTGAAGCTCGCGGTGGCGATATCGCCGGACGCGAAGCATTGCATGCAATGGCGTTTGCAGCAGCTGCTCATGCTGCCGTCAATGGAATCTCGACAAGTCCAGGTACACATGGCACTGCTCGTTCGCCCAGTCCAAGCACCATCATGAAATACATGCGAAATTCGAGTCCCCATGACGGAGCTGCCATGATGACGGATGCTAAGGAACGGCAGGCCAGCAATGATGTCAGTGAACGTTTGGCGAATGCTTCTGCGACTGAACAGGAGGAGGACAATCACGTGGAAGATCTGTCCATGGGCAAGCGAAGTAGCGACGGAGAGATGAATTCACAGCCGTCGACTCCGCCGCTGCCGTCGTTGCCGTTGACACCGCCTCAGTCGTCTCAGCAGCACGGCGTTATTGTGCCGCCGATGACGACCAAAGTGAGCTCGCCCACAAATGACGACTTCGCCCGGGATATTAAGCGTGAAATAAAGGCAGAAAACGCCTCTTTGGACTAG
- Protein Sequence
- MGGTEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIYVDDHVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPRIMKIAEQLEVKGLFDITDLKDKFDESQPFSHSTNNNSANNKQSISHQSSPVISTSTNISCAQSSSISPNYSYKSPYSNLYSRSPAASASERMTQWPSHMPSPMPQQHLQTAAAAMLSSVYDSSDNPLKRKKLSSMSSMLMSRDTPILRNVLAQSNAADSSQTPPGPIPPLHHHNMSSSMNNNDRNDNQSTNNSNGTDYSDMKMKYEEPNSPYTDKSFEDDTMDSSQHYSGDSRIAPYVAQQKPEWKRYKQYTRSDINSAIEHVRNGMSALQASRKFGVPSRTLYDKVKKMGITSGRPTNRTVRRSPSTGNRPAAFPYGISGTSSPFGHHLPGGESAQMQVRGGDDSDRERERDHHQDRDSRDAHHLPPTIPHSAAALLDATFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPSTIMKYMRNSSPHDGAAMMTDAKERQASNDVSERLANASATEQEEDNHVEDLSMGKRSSDGEMNSQPSTPPLPSLPLTPPQSSQQHGVIVPPMTTKVSSPTNDDFARDIKREIKAENASLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01382207;
- 90% Identity
- iTF_01382207;
- 80% Identity
- iTF_01383032;