Basic Information

Insect: Sylvicola cinctus
Gene Symbol: ZNF711_1
Assembly: GCA_963854165.1
Location: OY974082.1:56066755-56080986[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0028 0.14 12.4 0.8 1 23 291 315 291 315 0.92

2 14 8.4 4.3e+02 1.5 2.2 3 20 461 478 460 483 0.92

3 14 2.8e-05 0.0014 18.7 1.0 2 20 505 523 504 523 0.97

4 14 0.12 6.3 7.2 1.4 1 23 553 576 553 576 0.94

5 14 0.016 0.79 10.1 0.7 1 23 581 605 581 605 0.90

6 14 0.19 9.8 6.6 0.6 3 23 623 644 622 644 0.95

7 14 0.0053 0.27 11.6 4.2 1 22 649 670 649 674 0.94

8 14 0.0021 0.1 12.8 0.6 2 23 918 938 917 938 0.97

9 14 6.3e-05 0.0032 17.6 2.0 1 23 944 967 944 968 0.97

10 14 7.4e-06 0.00037 20.5 1.2 1 23 995 1017 995 1017 0.97

11 14 1.9 98 3.5 0.3 3 23 1028 1050 1028 1050 0.88

12 14 0.028 1.4 9.3 0.3 1 23 1056 1081 1056 1081 0.94

13 14 0.00012 0.006 16.7 2.9 1 23 1089 1111 1089 1111 0.96

14 14 0.00048 0.024 14.8 2.4 1 21 1117 1137 1117 1142 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0028	0.14	12.4	0.8	1	23	291	315	291	315	0.92
2	14	8.4	4.3e+02	1.5	2.2	3	20	461	478	460	483	0.92
3	14	2.8e-05	0.0014	18.7	1.0	2	20	505	523	504	523	0.97
4	14	0.12	6.3	7.2	1.4	1	23	553	576	553	576	0.94
5	14	0.016	0.79	10.1	0.7	1	23	581	605	581	605	0.90
6	14	0.19	9.8	6.6	0.6	3	23	623	644	622	644	0.95
7	14	0.0053	0.27	11.6	4.2	1	22	649	670	649	674	0.94
8	14	0.0021	0.1	12.8	0.6	2	23	918	938	917	938	0.97
9	14	6.3e-05	0.0032	17.6	2.0	1	23	944	967	944	968	0.97
10	14	7.4e-06	0.00037	20.5	1.2	1	23	995	1017	995	1017	0.97
11	14	1.9	98	3.5	0.3	3	23	1028	1050	1028	1050	0.88
12	14	0.028	1.4	9.3	0.3	1	23	1056	1081	1056	1081	0.94
13	14	0.00012	0.006	16.7	2.9	1	23	1089	1111	1089	1111	0.96
14	14	0.00048	0.024	14.8	2.4	1	21	1117	1137	1117	1142	0.93

Sequence Information

Coding Sequence: atgttaaatgaaaaccTAGAGGACACGCACCTCTGCATTAAATGCCGAGCTACAATTGTTGGTCTGGACCAATACGTACAACATCGTAAAATGAACTGCGAGAAAAATGTTCCCATTTCAGAAGAACAACCAATCGCTGTTGATTGCGAGCAAGAAACCCACACTCCCTATGAACCGTATAATTTTGACGAAGGTGCAATCCGAGAAGTCACCGATGTAGATTTCGATGCGTACGTTGGTCACGACAGCAAAGTTGGGGTTTCATCAAAGGAAATCGATCCGCCCCCATCACAGGGTTACGATGACCCCTACGACCATGGTTTGGGTGCTGACATTTTTTTCACCTCATTACGATTACAAAGTAGTTCCAAAAAGTCGTCAATACCTTCCAAAAATCTTGGCAACCGTATTATGACTAGAAAGACGAAAGCTGCCGTTCTGGCAAATTCAGATTTTGACTGGGCAGACTCTGGACACGAAAAATTGCTAAAAGCTGTGAGCGAAATAAGCGGCTCAAAAAAGGACGCGACTCTCTTTGACttgaattatttcaatcaTGAATCACCAGACCTCTCAGAAATTGACGaagatgatgacgatgatgagcCCTATGAGTATTATAATGCACCACCTCAAACGCATACCGGTGGTAAGTGGAAGCCTGATGATCGTCCAACCGTTATACGAAAATGGAATGAGCAAGATCATTGGGTAGATGATCATGGATTTAAGGAACCAGATCGTTTAGACAAATCATTCGAAGATGACGATATTATTCCGCCACCAAGTCACACAAAGGGAAAATGGATTCCTGGTACTAAAATAGTAAAGCTGAATTATAAAGCAGAGGATGAGAAAAATCAAACCGAATTTCGTTGCAATGTTTGCAACAAGACCCTTTCATCTAGAATTGTCTATGAACGACATATTAAATCGAATTTGCATCAAAAGCATTTACAGACTGAATTTGATGACGATACCCTTACGTTGATGAAATCAAGGAAATCATTTAGTAACAGATTGCGTCAGAAACGAATTACCGCAACTGCAGTTAGTGGAGATTTGAAGAAACTTGAAAATGAAGCTTCAGCAAAAAAGACGCgccaaaaaaagtttattcgATGTGAGCCATGTGGCAAAAGActtccaataaataattatggaaAACATCTTATTTCACAATATCATTACATCAAAATGAATGCCAGTACCACCCACGGCTATGACAGCATTCTtacaaacattgaaaaaattgtggtgCAAGCTCCATACCAGTGCCATCCCTGCCGATTTTACGCACACACGGAGAAGACTTTTTTGATGCACTGGGACTCGAAATTCCACAAAGAAATCATTGCCTCAAAGGATGGAAAGTTTTGGTGTAGCTTCTGTAAATTCCAATGCACGGAGAACTCCGAAATGCGCTCCCATTTGACTGGTGAACAGCATCAACGATTAATTTCGGtaatgaacaaaaatgttcCCATAACTATTCGTAAAAATATCTGCATTCAGTGTCACATTTGTGGCAAAGAATTTCGATACAATGTGAGCCTCAACCATCATATGCCAAAGTGTCAAGAAGAAAATGaagcaaacacaaataaaGAAGAAACTGACTCTATTATTGCAAAAGCATATCACCaacaaatgctttttaaatgctCAATTTGCCAGGACAGTTTGAAGTCTCGCAGTGCTCTGCATCTCCACGAAGCTAAGAATCACAACAAATTTACGTTTTTTTGTGGAGTGTgtgatttgacttttgaaACATCTCAAGAGGCGAAGAAACACCGCACCacaaatgaacacaaaatCGTCTCTGCTAAAATTAAAGATGACCCGCAAAAATTGGCACGCAATTGTCGTCACTGTGGAATTGAAGTAGCAGACACAATAAAACTTAAGGAACACTTACGCGAGTTTCATCCACTTAACCAGTACCAATGTGTATACTGTGGTGAAtcgtttattcattttcaagaGTTGAGCACTCACAAGCGTGTCAAAAGATGTCACTTAACATTAACCAGAAAAGTAGCCAAAACCTCTGTACAAACGTCAGACATGGCGAACCAAATAAATAACGAGGAATGGATAGACCAATCCAGACTAGACCACCTAATGAATGAGTCCGATTGCAATGCAAAAGAGACGCTGAACTGCACGGAAATAATTGAGCAAAACAACGAACAACAACGCAGTCTAGAAAATTATGATGTGGCCGATGGTGCGGCGGCCACTACTACTGTCCTTGCAGCTTATGATGTTATTGCTAATGATGATGTTGTTGATGATGCCGATGATTCGTCTGCTGGCAACATTGCGACCGCAGACGAGAACACCGCTATAGTGGTCGTCATCAAATCGAACCCAACTGAAACACCTGAACACCGTTCAAGCATTGCATCGCATGACCATCATGGTATCGACAACAACACAGAGGCGATAGCGGTGgtggcaacagcagcagcagcagcagcaccatcACCACCATCAGCAGCCGGCAAACTGACCAGCAGTGCGGGGAAGCAATGCAGTGAACGCACAACAGAGGCAAATAATATATCAGATGAAGCACATTGCGTGTTTATCGACGAAAATGGACAGTCTTTCACAGCAGGTGACAGCGAAAAGGCGTGGGTGTGTACTGAATGCCCTTTCACAACACAATCTCAGGCTTGTTTCATCTTCCATAAGTTGTTGCATAACGATGATATGGTTAACATTTcgtcaacattaaaaataaaatgccccCTTTGTGTTAAGAGCTTTGTGAAGTCCTCGTTGATGTACCATTTGCGGCAACACACAAATGAGAAGCCGTACAGGTGCGATATGTGTGACAGCTCATTTGTCAGATCGAGCAATTATTCCGAGCATCTACGTAATGTTCATCACAAACCAAAAAAGGATGGCACCGTAGCAGCTACAAAACGTCGAAAAAAAACTGAAGTTGCAACGGCTGATATGACGCTGTATCCTTGTGAAATTTGCCAAAAAAGCTTCAAAAGCAGCTTCCTTCTAAAACAGCACCTCTTCGTTCATCGTGATCGATTAGCGCCGGTGAAGAACGGCTGCACGATGTCCGGGTGTCGATTCATAGCGCGCACATCCAGCGAATTGCGCTACCACCTGTTGGGGCATTcgacagaaaaaaattacgcaTGCACGGAGCCTAATTGCACATACAAGGCGAAAACTCCGATGCAATTGAAAAGGCATGTTCTCACCAACCATAGTACGACTGAAATGAAGAGTTATGCGTGCACCCAATGTGaagctaaatttaaaaagtccaGCCACTTGCGACGACATTTAATTCAGCACACTGGGAATCGACCCTACAAGTGTCCACATTGCAAGTATTCGGCCAACGATTCGgaaaatttaagaaaacacgTCCTCAAGACAAAGAAACATCGCGGGAAGGTGTTGTATGAATGCAAGCTGTGCGTGGATGCCGGAAAAGAGTTCGGAACGAACTTTTATCGTTTATACACTGATCATCTTTTTGATTGTCATCAGAAAAcgatttaa
Protein Sequence: MLNENLEDTHLCIKCRATIVGLDQYVQHRKMNCEKNVPISEEQPIAVDCEQETHTPYEPYNFDEGAIREVTDVDFDAYVGHDSKVGVSSKEIDPPPSQGYDDPYDHGLGADIFFTSLRLQSSSKKSSIPSKNLGNRIMTRKTKAAVLANSDFDWADSGHEKLLKAVSEISGSKKDATLFDLNYFNHESPDLSEIDEDDDDDEPYEYYNAPPQTHTGGKWKPDDRPTVIRKWNEQDHWVDDHGFKEPDRLDKSFEDDDIIPPPSHTKGKWIPGTKIVKLNYKAEDEKNQTEFRCNVCNKTLSSRIVYERHIKSNLHQKHLQTEFDDDTLTLMKSRKSFSNRLRQKRITATAVSGDLKKLENEASAKKTRQKKFIRCEPCGKRLPINNYGKHLISQYHYIKMNASTTHGYDSILTNIEKIVVQAPYQCHPCRFYAHTEKTFLMHWDSKFHKEIIASKDGKFWCSFCKFQCTENSEMRSHLTGEQHQRLISVMNKNVPITIRKNICIQCHICGKEFRYNVSLNHHMPKCQEENEANTNKEETDSIIAKAYHQQMLFKCSICQDSLKSRSALHLHEAKNHNKFTFFCGVCDLTFETSQEAKKHRTTNEHKIVSAKIKDDPQKLARNCRHCGIEVADTIKLKEHLREFHPLNQYQCVYCGESFIHFQELSTHKRVKRCHLTLTRKVAKTSVQTSDMANQINNEEWIDQSRLDHLMNESDCNAKETLNCTEIIEQNNEQQRSLENYDVADGAAATTTVLAAYDVIANDDVVDDADDSSAGNIATADENTAIVVVIKSNPTETPEHRSSIASHDHHGIDNNTEAIAVVATAAAAAAPSPPSAAGKLTSSAGKQCSERTTEANNISDEAHCVFIDENGQSFTAGDSEKAWVCTECPFTTQSQACFIFHKLLHNDDMVNISSTLKIKCPLCVKSFVKSSLMYHLRQHTNEKPYRCDMCDSSFVRSSNYSEHLRNVHHKPKKDGTVAATKRRKKTEVATADMTLYPCEICQKSFKSSFLLKQHLFVHRDRLAPVKNGCTMSGCRFIARTSSELRYHLLGHSTEKNYACTEPNCTYKAKTPMQLKRHVLTNHSTTEMKSYACTQCEAKFKKSSHLRRHLIQHTGNRPYKCPHCKYSANDSENLRKHVLKTKKHRGKVLYECKLCVDAGKEFGTNFYRLYTDHLFDCHQKTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -