Scin000974.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sylvicola cinctus
Gene Symbol
Znf711
Assembly
GCA_963854165.1
Location
OY974082.1:13119804-13130011[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.0023 0.11 12.7 3.7 3 23 372 392 371 392 0.97
2 29 0.042 2.1 8.7 2.3 2 23 399 421 398 421 0.90
3 29 0.031 1.6 9.1 2.4 1 23 429 451 429 451 0.98
4 29 0.038 1.9 8.9 0.1 2 23 457 479 456 479 0.91
5 29 7.7e-05 0.0039 17.3 2.3 1 23 486 509 486 509 0.97
6 29 5.4e-07 2.7e-05 24.1 1.0 1 23 514 536 514 536 0.98
7 29 1.6 80 3.8 0.5 3 20 542 559 541 561 0.88
8 29 0.0013 0.065 13.5 1.1 3 23 619 640 618 640 0.92
9 29 1.4e-05 0.00073 19.6 2.2 1 23 645 668 645 668 0.95
10 29 0.17 8.8 6.8 4.0 1 23 1101 1123 1101 1123 0.96
11 29 0.02 0.99 9.8 4.5 2 23 1130 1152 1129 1152 0.89
12 29 0.13 6.5 7.2 3.6 1 23 1160 1182 1160 1182 0.96
13 29 0.033 1.7 9.1 0.3 2 23 1188 1210 1187 1210 0.90
14 29 0.01 0.51 10.7 1.5 1 23 1217 1240 1217 1240 0.96
15 29 3.9e-06 0.0002 21.4 2.0 1 23 1245 1267 1245 1267 0.98
16 29 0.007 0.35 11.2 0.4 3 21 1273 1291 1272 1292 0.94
17 29 1.3 66 4.0 0.0 3 23 1310 1331 1308 1331 0.92
18 29 0.0053 0.27 11.6 0.8 2 23 1349 1371 1348 1371 0.95
19 29 1.7e-05 0.00085 19.4 2.8 1 23 1376 1399 1376 1399 0.96
20 29 7 3.5e+02 1.7 0.5 3 14 1584 1595 1583 1598 0.86
21 29 0.14 6.9 7.1 0.9 2 23 1885 1907 1884 1907 0.89
22 29 0.0097 0.49 10.7 0.3 1 23 1915 1937 1915 1937 0.97
23 29 0.1 5.1 7.5 0.4 2 23 1944 1966 1943 1966 0.94
24 29 0.0019 0.096 13.0 4.4 1 23 1973 1996 1973 1996 0.97
25 29 4.3e-07 2.2e-05 24.4 0.2 1 23 2002 2024 2002 2024 0.98
26 29 0.08 4.1 7.8 0.6 2 19 2029 2046 2028 2048 0.95
27 29 2.1 1.1e+02 3.4 0.8 2 23 2073 2095 2073 2095 0.95
28 29 0.0016 0.08 13.2 2.3 2 23 2114 2136 2114 2136 0.96
29 29 0.00024 0.012 15.8 0.9 2 23 2142 2164 2141 2164 0.92

Sequence Information

Coding Sequence
ATGAAGCAAAAAGACCAATGCATCGTAAGCTCCTGCCCAAATAATGTTAGCATTAAAATTTCGCTGTTTAGCTTCCCGAAAGATGCGACCagatCTCGAATTTGGATGAAGCGTATAATGCGTAGGGATTTATTGAATCAAACATCAGAGTACATTTGGGCGAACTGTCGCATATGCAGTGACCACTTCGATGTCAACTGCTTTACAACCTACAAACGCAATCGCCTCAAAGCGGATGCCATCCCAAACATTTTATCCACCCAATACTATGAAGATAAAACTGTTACAATCTACCACGAGAAACCAGACGGCGATGAAAGTGATTCAGATGATGAAGATAACATTCCACTGGGTCGACTTGATATTCCACGGCGTGACGATTTGACGACAGTTTGTCGTGGCTGCATGAGTTCATCCAAAAAGCATCTCACAATTTTACTAGAAGACACCACAATGCAAATGTTTAATCAATGTACTCGCTTGAATGCAAGTTATGGCGACGGACTACCCAATGCCATTTGTGATGCATGTTTAAACTCCTGCCGGTTATGGTCTGACTTTTATGCACAATGCCAACACAGTGACATACAGCTGCGAACTGATTATGGGGTGAAAATTCCGGAAAAACTTATGCACCGCAAATGCCATGTACGAGATCCTGTAGAGTCCGTTAAAGTGGAAGAAGATGTTGAGCCAGGAATGATGATGGACAGTTTTGTGTGCAATTCATGTGATGTAACTATTTACGGTGATGAGTATTTGACACATGTTTGTGGTGGCACTGGGAGTAATGTCAGTAATGTagaatgtaaaaataatcatgTTGAGCAGCTTAAGGAGATGGATTCTTCTTGCAACTCAGATTTGGGAGAGATTGATAAGTACCAGGTGGATTTTTCTGATGAATCATGTGATGATGAGGATGATAATGACATAAAAGATGACGAAGATTATGACTCAAAAAAGGAATCTGGAAATGATAGTAAAATAGGTAACATAAACGTTAATGAcagtgaaaatgaagaatgcAGTACCAGTGATGATGACTATGAAGAGTTTGATGAAGACCATGACAATGGTGATGTTGATAAATCAAAAGTCAAAGTTAATAACTGTCAAAAGTGTCCGCTTAGATTTGTTCGACCAAAAGACTTCAAACATCACatgaaatttcacaaattggTTCCTgtaataaaatgtcaaaaatgtgGAGAAACATTTGACATAAATAGATCGTTAACTGCACACtgtaaaaaaatgCATCCCGGTGAAACGATTGCCAACTTTATGTGCACAGAGTGCAATAAAGCATGTCTCAGCTACAGTTTACTAAGAATGCATCTAAATAGTCACGACAATGTTGGCATCATGTGCACACAGTGCGGCATAATGTTGAGCACACGGGCTGCATTGAACGCCCACAACGCTCGTTTCCACACTACCCATGGGAGGATATTTAAATGCGCAGAGTGCCACAAGATATTTAATACCATTTCTGAACTTAAAAGTCATAGAAAAAGTGTGCACACAGAGCGGGCATTTAGTTGCACGTTTTGTCCAAAAAGTTTTAAGACTCCAAGCACGCTTAGAATTCATATTCTGACGCATTTGGATAAGAAACATTGTGATAAATGTAAACGCGGATTTAGATCGGATGAGATCCTTGCGAGGCACATTGACAAATGTACTGGACCTGCAAAGAAAAAACACTTTCAATTGAGGCCGCGTATTGATTGTGGTATTTGTAAAGTCACACTGGATGGTGGTCGTGAGTTGGAAGCTCACCTGATTGAGGTGCACAGCAATGAAGTCTCTGATATTCGTAAGGAGATtgataaacataaaacaaaagcatGTTTGGAATGTGGGAAACGATTTTTCTATTATTctAATCTCAGGACtcataaaatacaaacccATGGAAAAGTTGATTTTATATGTGATCATTGTGGTAAATCGTTTCGTAGTTCGACTAGTCTTATATCACATACTGCAAGAAAACATCCAGAAAAAGTACCAGCGCCCCAGGCTTTGCTGGATAGGTTGTTCCATGATACCAACACTTATGATACCGACCGTTTTCCTGCAATAAACAATTGCCATCGATTAGGCGTCTCACAGGAAGCACTGGTCTTGCACTGGAAGAGAATGCTGATTCTTGGTCTTCCACATCATTGGATTTTCATGAAGTGCATTGTCACCGGTTGTCCAAACAATGTTAGCCTGAAAATCTCCCTATTTAGTTTCCCGAAAGATCCAACAAGattgcgATTATGGATGAAACAAATAGGACGTTTAGATTTGCTGGATAAATCATCGGAATACATTTGGACGAACTGTCGCATTTGCAATTCCCATTTTGAGTCCACCTCGTTCACCTCCTACAAACACAATCGCTTGAAAGCGGATGccattccaaatattttaccCACAAAGGAATACAATCAAGATAAAACGGTAACAATATATCGAGAAGAACAACAAGACGACGAAAGTGACTCGGAATGTGAAGACGACATTTTATTTGGAACGTCTGAGATACCAAGGCGAGATGATTTGACGACAGTTTGTCGTGGCTGTATGAGTTCATCTAAAAAACATCTTACAATTTTACTCGAAGACACCACAATGCAAATGTTTAATCAATGTACCCGCTTGAATGCAAGTTATGGCGACGGATTACCCAATGCCATTTGTGATGCATGTTTAAACTCCTGCCGGTTATGGTCTGACTTTTATGCACAATGCCAACACAGTGACTTGCAGTTGCGAACTGAATATGGGTTGACGATTccggaaaaaaataataaacccaAAAGTCGTGTTGCAGAATCTTTAGAGTCCATAAAAGGTGATGTTGATGGTACTCCAAGTATGACGATGGATAGTTTTGTGTGTAATACATGTGATGAGACAATTTACGGTGATCAGTATTTGACTCATGTTTGTAGTGTTGCTGCTGAGAATAAAGATGTAAAGAAAGGAGAATGTGATATAAATCCTGTAGAAGAGCTTATCGACACTGATTCTTACTCTGATTCAAATTTGGATGAAGAGAAATTTGATGATAAATTTCAAGAGGATTTTTCTGATGATGATATTGATTTGTCTGACTCATGTGATGGTGACGATGATCCAGATTATGACTATGCAATTAAGGAATCAGTTAATAATATCAACGGCAAAAAAAGGTCCCATGCAGAAATTTACAATGATGACATCAGTAGTATTTCCAGTAATGACGAAGATGAAGACAATGAAAATGACAATTTAGATAGTATTAAACGAAAACGCAAGATTTATAACTGCATGAAGTGTCCACTTAGATTTACAAAAGtgacaaactttaaaaatcattttaagtttCACAAATTAGTTCCGgaaattaaatgtcaaaaatgtgGCGAGACATTTGAAACAACTGCCCACCTGTCCaaacattgtaaaataaagCACCCTGGAGAAACTATTGCCAATTACCTGTGCACAGAGTGTAACAAGAAATGCCTCACTTACAGTCTGCTGAGAATGCATCTTAATAGCCATGACAATGTTGGCATAATGTGCACAAAATGCGGCCGAATGTTGAGCACTCGGGCTGCATTAAAAGGCCATAACGCCCGAAAGCACAGTGGACGCGAGGGAACCTATAAGTGTGGTGAATGCCACAAGCTATTTGATACCATCACCGAGTTACGCTATCACGGAAAAAGTGTACACACCGAACGTGCATTTAGTTGCACGTTCTGCTCCAAAAGTTTTAAGACTCcttatactcTACGAGTACACATTCTCACCCATTTGGATAAAAAACATTGTGAAAAATGTCAACGTGGTTTTAAAATGGAAGACGCCCTCATCAGGCATATGGAAAAATGTACTGGGCCCGGTAAAAAGAAGTCCATTAGATTACCACCAAGAATTGATTGTGGTATTTGTAAAATGCCATTTGATGGGGGACGAGAGTTGGAAGCTCACTTGATTCATGTGCACGCTAATGAAGTGGACGATATTCGGAGGGAAATTGACAAACACAAGACAAAGGAATGCTTAGAATGTGGAAagcgatttttttatttcgcaCTTCTCAGAATGCATCAGATCAAATCCCATGGCAAAGTTGATTTCAAATGTGATCATTGTGATAAAAGTTTTCGCAGTGCGACTAGCCTTATTTCACATACAGCACGAAAACATCCCGAAAAGGTTCCAGCTCCTCAGGCTTTGCTTGACAAATGCAAGGAGCTGGAATCTGGAAAAGCACATAgtTCCACATCGTTGACGCTTGAATATCATACGGATCTGCCGCAATCTCCAATTTGCAATGAGTTGATAAATCTTAAATCAGAAGACATCTCAGAAGACATATCGCCGTTATTGCCTTTTTATTGTCCAGAAGAAACAAAGATTGAACcagaattaattgtttgtgacCTGTTGCCGCAGTTATTCCCTTTAATTTGTGATACAAATAAACATCCGACACCACAGTCATACCAAGCGGCTGGACCGTCATTGGGGACAGTGTCGCATTCATACAAAATAGAAAGTGGAATGGAAATGCATCCAGAAGCGAAACAAAAGGAAACTTtgAATGAAAGGTGTGTTGTTGAGAGTTGCAATAGAAATGTCAGCTCCAATATATCACTGTTTCGATTTCCAAAGGATCCAATCAGgtccCGCCTTTGGATGGAGCGCATTGGACGCAGGGATCTTCTATCAAAATCCCCCGAATACATATGGAAGCATTGCCGAATATGCGGTGAGCATTTTGACACCGAAAGctttacaacaaacaaacgcaATCGTTTGATGCCTGAATCAATTCCAACAATATTCTCCAAAGAATTGGAAGTTAACACCCAATCGTGTGTCACAATATACGAAGAAAATTGTGAGGATTCTGTGGATGACGATGATTTGCCATTAATACAGTCGTGTCGTTCAAATGTGGAACCAGAACTGTCACCTCTGTGTCGTGGATGCATGAGTGATGATAAAAGTAATCTAACATTATTACTGGAACCGACTACACTGAGTGTATTCCAGCAGTGTACACGCCTGAAAGTAAATTCCGACGATGGATTgtcaaatgcaatttgttgtcATTGCTTAAGTGCATGCAGGTTATGGGCTGATTTTCAGGCTCAATGCATGCACACTGAAAGTAAACTAATGTCCCTAAAATTTGGGAGTGACAATTGTAAATCTGATGATGATTCCCGTTTCACAAATGGGTTTACTGATGCTTGTAATGAGTGCATGGTGTGCAGTACATGTGGCCAAGAAATTTATGGTAGTCAATACATGGACCATGTGTGCTTTATTAATGTAGGGCCAGATGATGATAATGGGGAGGGAATGGAATGTGCGCCTGATATTGGAGAGtatgaagatgatgatgatgattcaAATGAAAGTGGTTCAACTATTGAGCTGGAGGACCTTAAAGAGTTGATACCATTGGAAATCGATTCCCATATTGAATTGAAGGATTTGCATTACGAAAAAGTGCCGGATGAAGATGTTGACGAGGATGTTAGGAAGCTTGATTCATTTAAGCCTTACAAGTGCACGAAATGTGATTGGAGATTTAAGTGTTTGAAACGATTTTCAGAGCATAAACAATTCCACGAATTTGTTGACgAAGTCAAATGTCGAGCTTGTGATATTGTTTTCAAACAAGCTTTGGACCTTACTAAACACTGTCGGCTGATTCACCCAAATGAACGCCTCCTGAATTACGTCTGCAAGGAATGTGCAATGTCATTCGCCTCATATGAACGCCTGAAGGTCCATGCATCGCGTCACAGCGGCAAAAAGGataaaatgtgcaatcaaTGCGGTGAGCTGTTCATATTAATAAGTGATCTTCGGATGCACATTTTTCGCAAACACACTGACCATCCAAAAGTGCATAAATGTGAGGAGTGCCATAAAATATTCGAGAGTGTGCACACGATGCGAGCGCATCAACGCATTGTGCATGTCAAGGAGCGTGCATTTGTCTGCGAAATATGTTCAAAAGCCTTTAAACGAAATgcacaACTTCGTGCACACATTCTGACCCATGTGGAACCAAAAGTGTGTGAAAAATGTCAGCGACGTTTTAAGTCGGATtcagcatttaaaatgcattcggGGAAATGCATTGGATTGCCAAGTGGAGCTTGTGCCAGATTAAAGAGACGTCAAACGTTAAAACGACCAATTGCTGTGTGTCCATTGTGCACACACGATTGTCCAAATATCAGAGGTCTCGAAGAGCACTTGAAGCAAGTGCATCGCAATGAGGATGGTATAGATATGCGAGAGGTCATTGACAGTGTCAAACAGGAACAATGTAAACACTGTGGCAAACgatattttgacaaatttGCTCTTAATTTACACGCCAATAAAgtgcacaaacaaaaacgCATTGAGTGTGAGCATTGCAATCGCATGTTTCGTGATCATGGCACATTGAGGAGTCACATAGCGGCAGCACACAAAAACAAGGCTGACATTCCAGGACAGTTAGAAATGTTTCTGACACAAAAGGAAATTTTATCTGGACAAGATCCGTTTCTAAAAGATGATTTGTAA
Protein Sequence
MKQKDQCIVSSCPNNVSIKISLFSFPKDATRSRIWMKRIMRRDLLNQTSEYIWANCRICSDHFDVNCFTTYKRNRLKADAIPNILSTQYYEDKTVTIYHEKPDGDESDSDDEDNIPLGRLDIPRRDDLTTVCRGCMSSSKKHLTILLEDTTMQMFNQCTRLNASYGDGLPNAICDACLNSCRLWSDFYAQCQHSDIQLRTDYGVKIPEKLMHRKCHVRDPVESVKVEEDVEPGMMMDSFVCNSCDVTIYGDEYLTHVCGGTGSNVSNVECKNNHVEQLKEMDSSCNSDLGEIDKYQVDFSDESCDDEDDNDIKDDEDYDSKKESGNDSKIGNINVNDSENEECSTSDDDYEEFDEDHDNGDVDKSKVKVNNCQKCPLRFVRPKDFKHHMKFHKLVPVIKCQKCGETFDINRSLTAHCKKMHPGETIANFMCTECNKACLSYSLLRMHLNSHDNVGIMCTQCGIMLSTRAALNAHNARFHTTHGRIFKCAECHKIFNTISELKSHRKSVHTERAFSCTFCPKSFKTPSTLRIHILTHLDKKHCDKCKRGFRSDEILARHIDKCTGPAKKKHFQLRPRIDCGICKVTLDGGRELEAHLIEVHSNEVSDIRKEIDKHKTKACLECGKRFFYYSNLRTHKIQTHGKVDFICDHCGKSFRSSTSLISHTARKHPEKVPAPQALLDRLFHDTNTYDTDRFPAINNCHRLGVSQEALVLHWKRMLILGLPHHWIFMKCIVTGCPNNVSLKISLFSFPKDPTRLRLWMKQIGRLDLLDKSSEYIWTNCRICNSHFESTSFTSYKHNRLKADAIPNILPTKEYNQDKTVTIYREEQQDDESDSECEDDILFGTSEIPRRDDLTTVCRGCMSSSKKHLTILLEDTTMQMFNQCTRLNASYGDGLPNAICDACLNSCRLWSDFYAQCQHSDLQLRTEYGLTIPEKNNKPKSRVAESLESIKGDVDGTPSMTMDSFVCNTCDETIYGDQYLTHVCSVAAENKDVKKGECDINPVEELIDTDSYSDSNLDEEKFDDKFQEDFSDDDIDLSDSCDGDDDPDYDYAIKESVNNINGKKRSHAEIYNDDISSISSNDEDEDNENDNLDSIKRKRKIYNCMKCPLRFTKVTNFKNHFKFHKLVPEIKCQKCGETFETTAHLSKHCKIKHPGETIANYLCTECNKKCLTYSLLRMHLNSHDNVGIMCTKCGRMLSTRAALKGHNARKHSGREGTYKCGECHKLFDTITELRYHGKSVHTERAFSCTFCSKSFKTPYTLRVHILTHLDKKHCEKCQRGFKMEDALIRHMEKCTGPGKKKSIRLPPRIDCGICKMPFDGGRELEAHLIHVHANEVDDIRREIDKHKTKECLECGKRFFYFALLRMHQIKSHGKVDFKCDHCDKSFRSATSLISHTARKHPEKVPAPQALLDKCKELESGKAHSSTSLTLEYHTDLPQSPICNELINLKSEDISEDISPLLPFYCPEETKIEPELIVCDLLPQLFPLICDTNKHPTPQSYQAAGPSLGTVSHSYKIESGMEMHPEAKQKETLNERCVVESCNRNVSSNISLFRFPKDPIRSRLWMERIGRRDLLSKSPEYIWKHCRICGEHFDTESFTTNKRNRLMPESIPTIFSKELEVNTQSCVTIYEENCEDSVDDDDLPLIQSCRSNVEPELSPLCRGCMSDDKSNLTLLLEPTTLSVFQQCTRLKVNSDDGLSNAICCHCLSACRLWADFQAQCMHTESKLMSLKFGSDNCKSDDDSRFTNGFTDACNECMVCSTCGQEIYGSQYMDHVCFINVGPDDDNGEGMECAPDIGEYEDDDDDSNESGSTIELEDLKELIPLEIDSHIELKDLHYEKVPDEDVDEDVRKLDSFKPYKCTKCDWRFKCLKRFSEHKQFHEFVDEVKCRACDIVFKQALDLTKHCRLIHPNERLLNYVCKECAMSFASYERLKVHASRHSGKKDKMCNQCGELFILISDLRMHIFRKHTDHPKVHKCEECHKIFESVHTMRAHQRIVHVKERAFVCEICSKAFKRNAQLRAHILTHVEPKVCEKCQRRFKSDSAFKMHSGKCIGLPSGACARLKRRQTLKRPIAVCPLCTHDCPNIRGLEEHLKQVHRNEDGIDMREVIDSVKQEQCKHCGKRYFDKFALNLHANKVHKQKRIECEHCNRMFRDHGTLRSHIAAAHKNKADIPGQLEMFLTQKEILSGQDPFLKDDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01382120;
90% Identity
iTF_01382120;
80% Identity
iTF_01382120;