Scin006199.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sylvicola cinctus
Gene Symbol
SMARCC2
Assembly
GCA_963854165.1
Location
OY974083.1:15666613-15670375[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-13 1.7e-10 40.6 0.1 3 44 684 725 683 727 0.96

Sequence Information

Coding Sequence
ATGGTGACAATACACCCCAAGAAAGACGGCAGTCCCAATGTTGAGTATTTCCAGTCGTCGGAGTCGTTGGCTGGCTTTGAGGTTGTACGTCTGTGGTTgatgaaaaattgcaaaaaaTATGTTCAGACTGATCCCCCCACAAAGGAGTCCTTGGCGCAGTTGTTGGTGCAATTTTTGCAGTACCAAGAGAATAAATTGGGCAAGCAGGCCATTGATCCGCCATCAACTAGATTACCGATGCGTCTCTTTTTGGACTTTAAATCGGGTGGTGCGCTGTGCCACATCTTCACGATAATGTTTCGTTACAAGCTGGATCAGCGCGGTCGGAAATTTGACTTTACCATTTCCAAGAATCCATTGCGTAAGGACGCCAACACACAAATGCTGTTGGAAATTGAGCAGGCACTCATCGAGGCGGAGTGCTTGCGCTTGCCTATTGTTTATGTCCGGCCGGACGTGGACAAGGCCATGTCTGCAAAAATTCGGGAAATTTTGCGCAACCACCAGGCGGACATCACCGAGGATGAAGAGGATGCCACACACATCATCTATCCGCATAGCGATCCAGTGGCGGAGGACTTTGCACGTCCCACATTCAAGCAGGACAAACACGTCATGATGCATTGGTACTATTCGCCCGAGTCGTATGACATGTGGACACTCAACACTATTGAGTTGCCGGACGGTGTGCCAGATGGGCCTCAACTGAACGTGTCGGAGCAGGCGTGGCGTGTCACAGCATCGTGGGTGCTCGATTTGGATCAGTATAATGAGTGGATGCCAGAGGAGGACTATGAAGTGGATGAGATGGGTAAAAAGAAGGTGCACAAACTGCGTCTATCCATACAGGACTTAATGGATCGCGCCAAAAATAAGGCTGGCGGCAGCAAGCAAAAACGCAAGCGCTCACCGTCACCAAAGAACAGCAGCAAGCGCAAGAGTACACGATCACCAGCGGTATTCTCAAAAAAATCACGTCCTGGTGAGCTGGACGATGAAGAAGATTTGACGCGGGACATGGAGGATCCACAGCCGGAGACAAACATTAGTGAGGTGCCAAAACCGACACCACCATCGGCCACAGTGACATCAGCGGCGGGACCGTCAATGATATTGAAACAACGTGTTGATGCGGACATGCTACCCTCAAAGGGTGCAGTTCTCGCCGATTTGGATGAAGAAATTGAACGCACTGTCATTTCAATTGCTGGGGGTGATGACTCGCAGTCGGGCAAGTTGTGCAGTGATCATTCCAATAATACGCAAGATTTTCAAGTGGTTGGCATCAAGGAGGAGTGCCTGGCCAGTGGTTTGGAGGACAATGTCACTGAGCAAACACATCATATTATTGTGCCATCGTACTCGGTTTGGTTTGACTACAATTCCATTAACATTGTGGAGAAACGTGCTCTCTCGGAGTTCTTTAACtcgaaaaataaatccaaatcTCCAGAGATCTATATGGCGTATCGCAATTTTATGATCGACACTTATCGCCTCAATCCCACCGAATATCTCACAAGCACAGCGTGTCGTCGCAATTTGGCTGGAGATGTGTGCGCCATAATGCGGGTGCATGCCTTTCTTGAACAATGGGGTCTTGTCAATTACCAAATTGATATGGAGACGCGACCAACACCAATGGGTCCACCACCTACATCACATTTCCACTTGCTCAGCGACACTCCATCTGGTTTGCAGCCGTTGAACACTGGCAAAGTGGCGCAACCGTCTGCTGCCAAAATGTTATTTGATTTGGATAAGAAACAGAAGGAAGGTGAAAATGCAACACCACCATTGGCATCAACATCAGCTGCTGCAGTAGCAGCTGCTGCTAATGCTGCGGTCGCGGCTGCTACTGCTGCAGCATCAGCTTCTGTTGCTACGCCAACAGCTGGACCGAGTGGAATGGCAAATGCAAGTGCAGCTGGAGCATCTGGCGTTGTGAAAGCCGAATATGATGGATCGGGAACGTATGGCTTGCGTTTGGATCAGTATGGCAAGAAACCATCGGTGATGCGAAATCGTGGTGCTGCCAACAGTGTGCGCGACTGGACCGATCAAGAGACTTTGTTGCTGCTGGAGGGCTTGGAAATTTATCGGGACGATTGGAACAAAGTGTGTGAACACGTTGGCACACGAACACAGGATGAGtgtattttgcattttctaCGACTACCGATTGAGGATCCGTACTTGGACGAGGAGGGACTGGGGCCGCTGGTCAATCAACCGATACCATTCAGTAAATCGGGTAATCCCATAATGTCAACTGTTGCATTTTTGGCTTCCATTGTGGATCCCAGAATAGCGGCTGCCGCCGCCAAAGCCGCGATGGATGAGTTTGCATCGCTCAAAGAGGAAGTGCCGCCCGGCTTTTATTATGTGCATTACAAGAATGTGCAGAAGGCGGCTAAACAGGGTAAATTTGATCCATCTGCTGGATTATCAGGTAGTGGAATTGCTGGCACAACGCTAGATAAgactgatgatgatgaagaaaaGGTTGGACCAGTCCCACACACAGGAGGGGAGGGCGAAGTAAAGGATCCAAATAAAGATGGTACTCAAGTATTGGAAAAAAACGTCAACAAACCATCAGAACAATTAGGTGGTGTTGACATGAACGCAACTATGGGGGCTGCTCCCCTAAAAGATCCTACCAAACACACAGACTCCCCAACAGCTGGTGAAACTGATACAGACACAGCAGGTCCGTCATCCGCCTCCGGCGATGGAGCCGAACCCACCGAagagcaaaaaaaagtatttaatgagGCTGAACTCCAGAAGGCGGCCTCAGCCGCACTCTCTGCCGCTGCTGTCAAAGCAAAGCACATGGCCGCTCTGGAGGAgcgtaaaattaaaagtttagtCGCACTATTGGTGGAGACCCAAATGAAAAAGTTGGAGATCAAATTGCGTCACTTCGAGGAGCTGGAGACGACAATGGAGCGCGAGCGTGAGGGTCTCGAATATCAGCGACAACAATTGATCACCGAACGTCAACAATTTCACTTGGAGCAATTGAAGGCAGCCGAATTTCGGGCGCGTCAACAGGCACACCATCGCCTACAACAGGAGCAAGCACAAGGACAATGGCAGCAGCCACCCACAACTACATGCACCGTCACCACAGCAGTTCAATCGACCAATGCTGCAGTCACATCACATTCGGCCAACACTTCAACAGCGGCGTCCACAATTACTGCGACAAGTGCTGTTGCAAATGTTGCCAGTCCTGCTGCAGCTGGTGGTGTTGCCACCACTTCGACTGACACAGCAGTGGCTGCAACCACATCAAGTGATGGCGCCGCTGCAGTGACTGCTGCAGCGCCAGCAATTGTTGCATCATCCACATCGGTGCAATGTGTGGCAATTGCATCCACATCACAACAGGCTATTGCAGCTGCAACTGCTGCTACTACTACTACTACAGTCACTGATGCTGCTGGTGAGGTGGTTGTTACTACAGCAGTGGTTCCAACTGCTGCATCTGCAACATCGGTTGGTGCCAATGCATCGGAACCATAA
Protein Sequence
MVTIHPKKDGSPNVEYFQSSESLAGFEVVRLWLMKNCKKYVQTDPPTKESLAQLLVQFLQYQENKLGKQAIDPPSTRLPMRLFLDFKSGGALCHIFTIMFRYKLDQRGRKFDFTISKNPLRKDANTQMLLEIEQALIEAECLRLPIVYVRPDVDKAMSAKIREILRNHQADITEDEEDATHIIYPHSDPVAEDFARPTFKQDKHVMMHWYYSPESYDMWTLNTIELPDGVPDGPQLNVSEQAWRVTASWVLDLDQYNEWMPEEDYEVDEMGKKKVHKLRLSIQDLMDRAKNKAGGSKQKRKRSPSPKNSSKRKSTRSPAVFSKKSRPGELDDEEDLTRDMEDPQPETNISEVPKPTPPSATVTSAAGPSMILKQRVDADMLPSKGAVLADLDEEIERTVISIAGGDDSQSGKLCSDHSNNTQDFQVVGIKEECLASGLEDNVTEQTHHIIVPSYSVWFDYNSINIVEKRALSEFFNSKNKSKSPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQIDMETRPTPMGPPPTSHFHLLSDTPSGLQPLNTGKVAQPSAAKMLFDLDKKQKEGENATPPLASTSAAAVAAAANAAVAAATAAASASVATPTAGPSGMANASAAGASGVVKAEYDGSGTYGLRLDQYGKKPSVMRNRGAANSVRDWTDQETLLLLEGLEIYRDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLDEEGLGPLVNQPIPFSKSGNPIMSTVAFLASIVDPRIAAAAAKAAMDEFASLKEEVPPGFYYVHYKNVQKAAKQGKFDPSAGLSGSGIAGTTLDKTDDDEEKVGPVPHTGGEGEVKDPNKDGTQVLEKNVNKPSEQLGGVDMNATMGAAPLKDPTKHTDSPTAGETDTDTAGPSSASGDGAEPTEEQKKVFNEAELQKAASAALSAAAVKAKHMAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQAQGQWQQPPTTTCTVTTAVQSTNAAVTSHSANTSTAASTITATSAVANVASPAAAGGVATTSTDTAVAATTSSDGAAAVTAAAPAIVASSTSVQCVAIASTSQQAIAAATAATTTTTVTDAAGEVVVTTAVVPTAASATSVGANASEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-