Scin011939.1
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- DNAJC1
- Assembly
- GCA_963854165.1
- Location
- OY974084.1:26474318-26476130[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7 1.9e+03 -1.2 0.4 3 12 22 31 21 38 0.78 2 3 2.8e-07 0.0002 21.2 0.0 2 38 301 340 300 341 0.87 3 3 9.7e-12 7e-09 35.4 0.1 3 43 389 434 387 437 0.93
Sequence Information
- Coding Sequence
- ATGACTTCAGTATtcagttttgtaaaattcgtggtgcttttatttttagtccAAACCGCAACCGCGTGGGATCAGGAAGAGTTGGAAATTTTTGATCTTGTCGAGGAAATCAATTTGAACTTCTACACTGTCTTGGGCATTCAACAAaatGCAACATTACCTGAAGTCAAGCGAGCTTTTAGAGGCCTCTCAATTCAACTGCATCCCGATAAAAATGATGCAGAGGATGCAAATGTTCAGTTCAGGAACTTGGTGTCCGTTTACGATGTGTTGAAGGACACTGGAAAGCGAGAAAAGTATGACAAAGTATTAAGAGAAGGTCTTCCAAATTGGAAGTCAGCACTTTATTACTACAGACATGTCCGCAAAATGGGTTTGGCTGAAATGGCACTGATTCTTTTTGTCATTATTACAGTTTGtcagtatttaatttcatggGCAGCTTATGCTGAGAAAAAGTTTACAACaGAACAATTACTGGGATCAAAACTGAAAAAactgcaaaagaaaaacaaaaacagcgTAGACATTGACACAATCCTCAAAGAAATTCCATCCCCCAGCGTTTTTAATACATTGCCGTTTCAAATTccaagaaccatttggaataTGCCTAAAGCCATTAAATCTGCTTATGTAGCCTACATAGATTACAAGGAGGAGCAGGCAGAAATTAAGCGACAAGAAGATGCGGAAATCGAGCATCAGCGTCTTATTGATGAGGAATTCATTCGAGAGAAAGAGGCCAAAAAGGAGGGTATCAAGCGCCGTAAGCAAATTTATGCAGCAAAAGAGAAAACTGATGAAGATTTGAAGGGGTTCtccaaattgcaaaaaaaaactggatcAAATGTGAATGCAGTGCGGCCGGCATTGCAGACCAAGGTAATGCTTTCTGGAGGTTTGTGGACTGATGAGGATCTAACTGAATTGGTGCGATTGGTTAAGAAGTATCCTGGTGGAACCACCGACCGTTGGGACATTATCGCAGAACAAATGAATAGATCGGTGGCGGAAATTACGTTTATGTCAGCAAAGATGAAGGAAAATGGATATAAACTGCCAGGTCAGGCTGATAATAACAGTGTGGCTGAGAATATTGTGCTGGAAGTTAAGaagattaaaaccaaaaaggaAGTACCAACTGTAGCCGCAGTTGAGACTAACTGGAGTCAAGATCAACAACAAGCGCTTGAATCCGCGATTATGAAGTATCCAAAGAACTCCTCGGCAGACCGTTGGTCAAAAATCTCCAACAGTGTGCCTGGAAAAACAAAGGAGGAATGCTTGTTGCGCTACAAACATTTGGTCGAAGTGATTAAGGCTCAGAAAGCCAAGGAGAAACTAGAAGCTGAAATTGCAGACAATCGTACCGATGACAATAAAGTGTTGGACGACGTTCAGGAAGTTGAAAACCTTCAAGTCGTGGAAGAGGTGTCTTCTGTTCCGCACAAAGGAAAACctaaaaataagcgaaaagaACGTAAGAAGAAAATGGATTTTTCGTCAAGCGACAGCGATGATATCGAGGAGGACGATTAg
- Protein Sequence
- MTSVFSFVKFVVLLFLVQTATAWDQEELEIFDLVEEINLNFYTVLGIQQNATLPEVKRAFRGLSIQLHPDKNDAEDANVQFRNLVSVYDVLKDTGKREKYDKVLREGLPNWKSALYYYRHVRKMGLAEMALILFVIITVCQYLISWAAYAEKKFTTEQLLGSKLKKLQKKNKNSVDIDTILKEIPSPSVFNTLPFQIPRTIWNMPKAIKSAYVAYIDYKEEQAEIKRQEDAEIEHQRLIDEEFIREKEAKKEGIKRRKQIYAAKEKTDEDLKGFSKLQKKTGSNVNAVRPALQTKVMLSGGLWTDEDLTELVRLVKKYPGGTTDRWDIIAEQMNRSVAEITFMSAKMKENGYKLPGQADNNSVAENIVLEVKKIKTKKEVPTVAAVETNWSQDQQQALESAIMKYPKNSSADRWSKISNSVPGKTKEECLLRYKHLVEVIKAQKAKEKLEAEIADNRTDDNKVLDDVQEVENLQVVEEVSSVPHKGKPKNKRKERKKKMDFSSSDSDDIEEDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01382849;
- 90% Identity
- -
- 80% Identity
- -