Basic Information

Insect: Sylvicola cinctus
Gene Symbol: snpc-4
Assembly: GCA_963854165.1
Location: OY974082.1:49992269-49994662[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.03 21 5.1 0.0 3 18 210 225 209 230 0.91

2 5 3.3e-09 2.4e-06 27.3 0.2 3 43 307 348 305 350 0.93

3 5 5.3e-11 3.8e-08 33.1 0.4 2 45 359 407 358 408 0.94

4 5 2.5e-08 1.8e-05 24.5 0.0 1 43 414 457 414 460 0.91

5 5 2.9e-10 2.1e-07 30.7 1.0 4 44 469 510 469 512 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.03	21	5.1	0.0	3	18	210	225	209	230	0.91
2	5	3.3e-09	2.4e-06	27.3	0.2	3	43	307	348	305	350	0.93
3	5	5.3e-11	3.8e-08	33.1	0.4	2	45	359	407	358	408	0.94
4	5	2.5e-08	1.8e-05	24.5	0.0	1	43	414	457	414	460	0.91
5	5	2.9e-10	2.1e-07	30.7	1.0	4	44	469	510	469	512	0.95

Sequence Information

Coding Sequence: ATGATGGATTCTGAGAGTCCTGTGGCTGGACCAAGCAAGATATTTAATCCATCAAATGAAAACTCTAACCAATTCAAAGGAActgacaatattaaaaatgaaagaatttttaaaattgaaattatcagCAATGAAGCGAACTCAACGTTACCTCAGCTTCAAGAAACTAGTTTTCCCTACAAGGTTGTCTACACAAACTCGCAGCCAGATGAAGAAACATCAATGGATAGCGACCACGAATCAGAAACTGTGTGCTCGGTTGAGACGTCAAATGATTTCGATCCCCAAACCAGTCagttaaattttgttcaagCAGCTAAAAAGTTGTTGGAGGAAAACCGTGAATTGTCACCTGAAaacttttccaatttaattgcaaaacagAAGCAAATGTTGGGAACTATGAAAAAGTTACTTTCGAGAATTGAAAAAGTTCTGAATGTTAAACCGATTCCAACAGCTGACCCAAAAGAGGAATCTAAAGATGTTAAACCGATGTTTTACCACAAGGATCTCCACATACAGAAGCCCTACTTTCTACCAAATTCGAGGAACATTGAATCTGATGAACAAGCATATCTCTGTCAGCACaactacaattttttaaacaaattcaaaccTTACAAACCATGGTCACCTGTGGAGATTCAAAATTTACAGGACGCTGTAAAACGACAAATGGGTGAACAtctaaaatacaacaaattagtGCCAACTGAATTAAGTATCAAAATGGGACCGACTTATGCGCCCAATTTTATGGAGAACATTCAGTGGAACGAAATCGTAAACATTATTCCGAGCACTTGGAGTCCCAATTTTAAGCTAATATCCgggatgcaatttaattacagacATCCACCGAACTCGTGTGAGGCCATGTGGAATGGTATTGCAAACCCGACACTTTGCAATGATGCTTGGAGCAATGATGAAGACAAAAAGttgatgcaaattgcaaaaaaatacaaaaattgtgattttgaaaaagtttccTCTGAAATGGAAAATCGATCATTTCTGCAGTGTCTGATGAGATGGCGTCTATTAGACTTGCGCGTAAACGCAAAAGTTGGCAGATGGTCAGCCAAGGAAGATGCAAATCTTATCAAGGCGATCAACAAATATGGAGGTAATACTGGAGTTTACCAATGGAACAAAATTATGTGGGACATACCGCATCGAACAAAGCAACAGGCATACTTGCGATGGACGTATGTGTTGAATCCGCAAATCTGTCGTGGTAGCTTTACCACGGAAGAGGATTGTGTGTTAATGGCGATTATAGAGAAGTACGGGAATAAGTTTAGACAATTTCCCAGGCACGTTTTGCCGGGTCGCACTATCGACCAAATCCGATGTCGCTACAATCATACTCTGAAAGAAAGGGATAAAAATCGTTTTTGGTGTCGGGAAGACGACAGCAAATTGGAACAACTAGTGGGTAAATATGGCACATCGAACTGGTCAGCCATTTCTAAAGAGATTGAGTACCACAATCGGATCAGCTGTCGCACTCGCTGGAATACAATTCAAAAGTTTCTTGCTGCAAATCCAAATAAAACTATCGGAGATGTTCCCACTAAACAACGAAGGTTGTCAACTCCTGTTACGGCTACCAATTGGCGGGAAACTTACacggaaataaaattgacagGTGAAAGTTATCCCAAAAGGAAAGAAGTTTCTTCAGCAACCGCCATGAGAGCCACAAAGCAAGagtattataaatgttttcaatttgcttTCAATTACAAGTATCCATGCATGAAGAAGGAGGCAAGTCTCTCAATTTGGTTGTACAATAATCTGATGATGAATCAAACATTGCCGATTACCGAACGCACAATCGATTACACGGCTCCAGACacagttgaaataaatgagGGTGGCCAAAATTGTTTGATAATGCCAAATTTGTCcacatgtgtgtgtttgagagCACTCTCCATTTTGTGTCACtcgaaaaagaaaacaaaagcCCCAATTGAAATCGAGCCACATGAAGCTTTAACAATgtttgaaaatcatttaacatttttgttgagCGCAACTGCCCGCTTGGCACTCCAGTTACCCAGTTTATCGGCAAGGCACAATGTTTCTGTTAAACTggaaaaatttcaatcaacTATTGCTGATCCTAATGAAGTGAAGGACAATGAGGATAATGTGGAAAATGAGGAGATTGGGGATAGTGAGGAGATTGAAGCAAATGAGGAAAATAAGGTTGGTAATGCAATTGAAGTAAAGGAAGATATTCATATAATGATTGTAGATCCGGCtgataatgtttttaagaGCGATAAAGTTGTAGGCGATAATATTgatgaaatataa
Protein Sequence: MMDSESPVAGPSKIFNPSNENSNQFKGTDNIKNERIFKIEIISNEANSTLPQLQETSFPYKVVYTNSQPDEETSMDSDHESETVCSVETSNDFDPQTSQLNFVQAAKKLLEENRELSPENFSNLIAKQKQMLGTMKKLLSRIEKVLNVKPIPTADPKEESKDVKPMFYHKDLHIQKPYFLPNSRNIESDEQAYLCQHNYNFLNKFKPYKPWSPVEIQNLQDAVKRQMGEHLKYNKLVPTELSIKMGPTYAPNFMENIQWNEIVNIIPSTWSPNFKLISGMQFNYRHPPNSCEAMWNGIANPTLCNDAWSNDEDKKLMQIAKKYKNCDFEKVSSEMENRSFLQCLMRWRLLDLRVNAKVGRWSAKEDANLIKAINKYGGNTGVYQWNKIMWDIPHRTKQQAYLRWTYVLNPQICRGSFTTEEDCVLMAIIEKYGNKFRQFPRHVLPGRTIDQIRCRYNHTLKERDKNRFWCREDDSKLEQLVGKYGTSNWSAISKEIEYHNRISCRTRWNTIQKFLAANPNKTIGDVPTKQRRLSTPVTATNWRETYTEIKLTGESYPKRKEVSSATAMRATKQEYYKCFQFAFNYKYPCMKKEASLSIWLYNNLMMNQTLPITERTIDYTAPDTVEINEGGQNCLIMPNLSTCVCLRALSILCHSKKKTKAPIEIEPHEALTMFENHLTFLLSATARLALQLPSLSARHNVSVKLEKFQSTIADPNEVKDNEDNVENEEIGDSEEIEANEENKVGNAIEVKEDIHIMIVDPADNVFKSDKVVGDNIDEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -