Scin009067.1
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963854165.1
- Location
- OY974083.1:50248267-50250879[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-17 9.6e-14 50.6 0.0 1 45 11 56 11 56 0.97 2 2 5.9e-19 9.9e-16 56.9 0.0 1 43 495 538 495 540 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTGTTGCTGGCAGACGTACCTACACCGAAGAAGAACTCCAAAGTGCCCTGCAGGATATTCTCAGTGGCAAACTGGGCACGAGACGCGCTGCTGTTCAATATGGCATTCCACGATCAACTCTGCGCAACAAAGTGTATAAGCTGGGGATGGAACAAAAGAGGGAGGCATCGCTACAGCAAACGATCGACGATCCTTTGGAAGATGAGGATAAGGAGATGTCGGGTGGTGAGGATGACAAGGATAGTCGCCATGGGAGAAGTCCAGTGCCGATCAACAACATTATGACCCAAAAACACCAGGAGGAATATTTGCGGCTTCTTGGAAATGCGTCAATGCCTTCATCTGTCTCGGCTTTGCAGGCGATGCAAAAGTTCAGTAAATACGCAGACCATGGCAAGTCGTTGAACTCTTCGTCAGTTCAAGAACAGTCAGTTCCGCAACCCCAGCCGAACATTCCACCACTAGATGGTAATCCCTGGCTGGATCAAAACaatatgttaatgttaattcaaGATCCTACGCTGCAGGAAATTATCCGTAATTATATGTTACAACAAGGatacaacaataatcaacAGTTAAAGAATATCAGCCAACAAAGTGGTAGTAGTGGTATAGGTGGATCATCGCAGCATTCGCTGGAGACTGCCCTTAATAACGGCAAATCCAGTGGATCCGATTTACGGCATTTACCATACGCAAAACAGCAATCGTCAACGCCATCGTCCACGGCTTCCTCGTCTGTATCGGCGGCTTCATCACAATTGCAACAGCATCTTCGCAGTCGATTGCCCATCAAATGTGAGACATCATTATCTGCTGAACATGGTAGCACTGGCATTCATGATCATAGCAGCGAGCATCATTTAAGCTCTGAGGATGCAGCTGTTATCCTGAGAATTCCGTCCGTTAAACCGACAATGGCAGGCGGTTCATCCACCTCTTCGACACCAGTATCTGGTAAAAATGGCGATGGCATTTGTACACCACCACTGCAAGCATCAACAATGGTCTCAACTCCAACGCCGCCCATAATATCGCCGAGTCCACAAAATCATATGCCAGGAATCTCACCGCCCTTACTGCGACACAACAATGATTCCGATTCCCAAACATTAACGGTGAACGACATTATCGGTGGTAGTTTAAATAGAACATTtcatcaacagcaacagcatcagcaacaacaacaacgtcATACGCCTCACATCACCCCCCAAGTACATCATGGTCATCAGTCACATCACCATCGTGATGCACACAATGCAAATGACGTCTACAGACCGAGTATATcggttattaaaaatttgggaGGTACCGATATATCATGTTTTGGTGGTAATCCAAATTTACTCGCAGGTGTCAATTCGCTGGGAAATAATTCCAGCAGTCATCAGCACCAAGCGGCTGCGGCTGCTGCTGCAGCGGCGGCCGGTAAGGGCACCCGGCCTAAACGTGGAAAATATCGAAACTATGATCGGGATAGTCTTGTGGAGGCTGTTAAAGCCGTGCAACGTGGTGAAATGTCGGTGCATCGTGCTGGCAGTTATTATGGTGTACCCCACTCGACATTGGAGTATAAAGTAAAAGAGCGACATTTAATGCGTCCACGGAAGCGCGAGCCAAAACTGCAGCCTCTCGATGAGCGAGCCTCAACATCGTCGTCAATGGCACCAAAGAGTAGTCAAGATCTACGGAGTTTTGATAAACAGACAAAGTCGATGGCAACTGGTATTAAGGGACCATCAATGAAATCTGTGACGCCAGGCAGTGCTGGAGCTTCCGGGCCATCGCCATTTCAGGCATCCCCTACAGCGACCACATCACCGAATGGCCTAAAAATGCCATTCATGGATCCGCAACTGGGCTATAATCCACATCACCTATTCTGGCCACAACCAGCCGGATTCGGCGGTATGAATTTAGACTTTGGTCGTGTTGCTGCCGCGGCGGCGGCCGCAAATTCTCCCGGTGGGGCCGCTGCATTCGCCGGCAATGCAGACACCTTCTTTGCTTCTCACGCATTGATGCAACAATTTCAGGATTTGCAGGCGAACGCAAAGactcaaaatgcaaataataacaacagCCATAATATGAAACTATTTGATGCTCTGTATGACGGACCGAGTgctaatattttattggatgGCATTATAAGAAGTAGTCTGGACCGGAAATCAGGAGATCATAGTGGAACACTACTACACCTTATAAAATCTGGACGATCACCTGCAGTGGCATCGAGCAGACGCATCGACGACAACACTAGTGATAATGTACGAACTGCTTCAGGCTCCAACAAAAGGCCTGGAAGTCCACTGAATTTATCAGATATCAAAAAAGAACGGTCCAGTCCAATGGAGCCGTCCAACGTTGATGATCGCATTGATGATTTGTCACTACCAAAGGATAACGCTGAGAGCATACTTAAGTTACGCGATGAGATTGCATTGCAAATTGGAGAGAAAGTGGCTGCACATAATTTAAGGAGTTCCACCGAAGGGCAAAATGGTGGTGGACCAATTCCATTACAAGATGAGGCCGACATCAAACCAttccatcatcatcatttacaTCATCACGATAATGATGACAGTTCGTAA
- Protein Sequence
- MSTVAGRRTYTEEELQSALQDILSGKLGTRRAAVQYGIPRSTLRNKVYKLGMEQKREASLQQTIDDPLEDEDKEMSGGEDDKDSRHGRSPVPINNIMTQKHQEEYLRLLGNASMPSSVSALQAMQKFSKYADHGKSLNSSSVQEQSVPQPQPNIPPLDGNPWLDQNNMLMLIQDPTLQEIIRNYMLQQGYNNNQQLKNISQQSGSSGIGGSSQHSLETALNNGKSSGSDLRHLPYAKQQSSTPSSTASSSVSAASSQLQQHLRSRLPIKCETSLSAEHGSTGIHDHSSEHHLSSEDAAVILRIPSVKPTMAGGSSTSSTPVSGKNGDGICTPPLQASTMVSTPTPPIISPSPQNHMPGISPPLLRHNNDSDSQTLTVNDIIGGSLNRTFHQQQQHQQQQQRHTPHITPQVHHGHQSHHHRDAHNANDVYRPSISVIKNLGGTDISCFGGNPNLLAGVNSLGNNSSSHQHQAAAAAAAAAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKLQPLDERASTSSSMAPKSSQDLRSFDKQTKSMATGIKGPSMKSVTPGSAGASGPSPFQASPTATTSPNGLKMPFMDPQLGYNPHHLFWPQPAGFGGMNLDFGRVAAAAAAANSPGGAAAFAGNADTFFASHALMQQFQDLQANAKTQNANNNNSHNMKLFDALYDGPSANILLDGIIRSSLDRKSGDHSGTLLHLIKSGRSPAVASSRRIDDNTSDNVRTASGSNKRPGSPLNLSDIKKERSSPMEPSNVDDRIDDLSLPKDNAESILKLRDEIALQIGEKVAAHNLRSSTEGQNGGGPIPLQDEADIKPFHHHHLHHHDNDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -