Basic Information

Insect: Sylvicola cinctus
Gene Symbol: ct
Assembly: GCA_963854165.1
Location: OY974083.1:43176981-43201578[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 7e-27 3.5e-23 81.2 0.0 3 71 514 583 512 589 0.94

2 4 0.5 2.5e+03 -1.7 0.1 8 30 698 720 696 733 0.80

3 4 6.7e-32 3.4e-28 97.2 0.0 3 77 972 1047 970 1049 0.96

4 4 1.6e-30 8e-27 92.8 0.0 3 75 1190 1263 1188 1267 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	7e-27	3.5e-23	81.2	0.0	3	71	514	583	512	589	0.94
2	4	0.5	2.5e+03	-1.7	0.1	8	30	698	720	696	733	0.80
3	4	6.7e-32	3.4e-28	97.2	0.0	3	77	972	1047	970	1049	0.96
4	4	1.6e-30	8e-27	92.8	0.0	3	75	1190	1263	1188	1267	0.95

Sequence Information

Coding Sequence: ATGGTATTTTGGCACTGTGAAGACGGTGATTTGTTGAGCTGTGGTGCGGCGATTGTCAATGTGGTGGTGATAAACGCATTGGTGGAGGAGGTTGCACGATTACGTACAGCTTTAACGACACTCCAGGAGGCGCACACTTCACAAATCCAGCGGTTAGAGGATCGACTGGAAGAGAAGCGGCTGCACATTACAAGACTTGAAGCACGTTTGGAGAAACACACGGATTTGGAGGAGAAAAAGGACATCAGcGGCTTAAGCTCTGTCGACTTATCAACTGCAGCAGCggcggcagcagcagcagccgtAGTGGCTGATCCTAAACAATTCCAAGAGTTAATACTCGAGCGGACAAAAGCATTGGCCGCTCAAATTGACTTACCGCTTAAGTCATCATCTGACGGATCTTCAGAACAGCACCAACATGGAAAACATTCTCGTAACACTTCCTCCCAATCTCCAACAATACCTGCACAACAACAGCCAACCGTACCAAATCACTCTCGTACCCAAACACCCACAGTGCAGCAACAGCTGCCACCACTGCTGACGCCACAGCAtcttcaacaacaacaacaacaacaccaagcGCATTCACTCACTAACAATGATAGCCACCAAAACTCATTAGCAAATTATAATAGCTCAGAGAAATCAGCCGCACTAATTCCGCCATCATCCCTACAAAATGTGGATATGTTCAGCTCATTTTTGGGCGAGGAAATAGTCAACCATTGGCGACGTGGCCTCCAATATGCGCCACTCATGCCCAATCCATCAGCACTTGATTGCCAATTGCTGGCTGCCAATACAGGCTTCAATCTAATCTCATCCACTTCCAACACCACCACAAACACCTTATCAACGACTACATCAACACCAACCATTAATCTAACCAATCAACATTCGCCTCCCCCCACAGATGGTGGTCTACTGCATGTGGCAAATAATGCTCAACACACAGCCGCAAGCTTGCtacttcaacaacaacaacaacaacaacaacttcaATCGCAACAACACTCCCAATTGCTACCCAACGCAATTCCCCAACAGCTACAGCCTTCACAGTTGTTGTCGCATCAACACCACACAACGTCCAGCACCGCCGCATTATCTGccaaccaacaacaacaacaacatctgATTGACGATAAATCCAGTTGCCATCTTGACGCCTCATCCACAGCCAGCACACCCGTGCTGCAAGATTGCAGTCGCAGCGAAGACAACAACCACCTGATGAACGGTAGTGGTGGCGGTTTGACCCCACTGTCAATGTCCATCTCAAAAAGTCCCGCCGATCACGACAATAACAACGCCGGATTGAGCGTGCTGCCGCAAGCTCAAAGTACACCCACATTTCCGCTTGGTTTGCCATTCCAATTTCAAGATCGGCCGCATTTTCGTTTCGCCGAAGATCTTCAAATGCCACCCGGCACAATGGCCGGTCGTCTCGGTGACTCACTGATACCCAAAGGTGATCCCATGGAGGCGAAATTACAAGAGATGCTGCGCTACAATATGGACAAGTATGCCAATCAAAATCTTGACACGCTGCACATATCGCGACGTGTGCGTGAGCTGTTGTCTGTGCACAATATTGGACAGCGATTGTTTGCCAAGTATGTGCTGGGGTTGTCGCAGGGCACCGTATCGGAGTTGTTGTCGAAACCGAAGCCATGGGATAAGCTGACGGAGAAGGGACGTGACAGTTACAGAAAAATGCATGCATGGGGATGTGATGATAACGCTGTGCTGTTGCTGAAGTCGTTGATCCCGAAAAAAGGTTCAGATTCTGGCCTACCCACCTATGGCCGACCAGACGATAGCATGAACGAAGATCGGATAGCGCACATTCTGACCGAAGCATCCAACCTGATGAAAACACCGGAACAACATAGGCATCAGGCGCAAATGCAACAACACCACCATCAAATGCAACAccagcatcaacaacaacagcaagcgcaacaacagcagcaacagcagcaacaacagcaacagcagcaacacaATCAAATGCAACTGGACGACTCACACAGCAACGATGATTCCAAGTCGCCCCACAATCAATCGCCGTCGCCATTCTCCAAAGACTTGCAACGACGCATGCAAAAGAAATACGAAAACGATGACATATCACAGGAGAAAGTTGCTCGCATCTACCAGGAGGAGTTGGCCAAGCTGATGAGTCGAGCACCACGAGACGCTTTCCCTGGTCTCCTTTTTCCACATTTCTTTAGTGCCGGTGGTATGCCACCAACAccccaacaacaacagcaacaacagcagcagcagcagcagcaacaacaacagcaacagcagcaattGCCAGCCCAACAAATGCCTGAAGAGAACTTCCGCCTTGCTCTGGCCGCCTACCAACGTGAGGTTGCCAAAATGCAACAAAGCGGCGCCACCAATGCAATACCGAATTTCccaaatttgcaaaatattctcGCTCTGCAGCAGCACGCACTCAACGGCTCCGTGCAAGATCTCTCCGTAAAGAAAGACTCTCAACCGCATATCGGCATGAACGGTCAACACCACCAACACCATCCGCAACAATCGCATACGCCATCCATTGACGGCGACTCAACCAAAGATCCGGACGAAGCAGCACGTCACTCGGGCAGCGCCTTTAGTCTAGTGCGACCCAAGCAGGAGCCCGGCACAACGCCGACACCCAGCATCTCGTCGGCGGCACCGAGCCCCCTCAGCAATTCCATACTACAACCGGCAATGACACCCACCGATGACTTTTCGTCAGCGGCCAGCCCACTGCAACGCATGGCCTCAATAACGAACTCGTTAATCACTCAATCACCTGTCAACACACACCACTCAACTCCGCAACGTCCGCTTAAGGCCGTCCTGCCGCCCATCACGCAGCAACAATTTGACATGTTCAACAACTTGAACACCGAAGACATTGTGCGACGCGTCAAAGAGGCCTTGTCCCAATATTCCATAAGTCAGCGACTATTTGGCGAATCGGTGCTGGGTCTGTCACAAGGCAGCGTCAGTGATTTGTTGGCGCGTCCCAAGCCGTGGCACATGCTGACGCAGAAAGGCCGTGAACCGTTCATTCGCATGAAAATGTTCTTGGAGGATGAGAATGCCGTACACAAATTGGTCGCCAGCCAATATAAGATTGCACCCGAGAAACTGATGCGCACTGGTAACTACAGTGGAACGCCGCAGCTATCGTCGGGCATGGCCAAACAAATGCCACCTGGCATGCCAAAGATGATGAGCGAGATGTCCAAGTTGCAACAGGAACAGCATATAATGCAGATCCAATCGCAAATGTCACATCTGCAAGCGCAAGCACAACAAGCTGCGGCCGCCGCTGCTGCTCAGCAACAAGCGCAACAACAGGGTATGTTGTTGACACCACCTGGAATGCCACCCCATCATGCCATCACCTTACAGACGCAACAAGAGAAGAAAGCAGCGGCTGCCATGCAAATGCCACCAGTGCATTCTCCTCAGCAAAATAACGCAATGCGTGGCATGCATCAGCATATGTCACCAACTGTTTATGAGATGGCTGCTTTGACACAAGATTTGGATACACAAGTCATTACCACAAAGATTAAGGAGGCACTTCTTGCCAACAATATTGGACAAAAGatttttggAGAAGCTGTCCTTGGACTCTCACAAGGATCCGTTTCTGAATTGCTATCAAAGCCTAAGCCCTGGCACATGTTGAGCATTAAGGGCCGTGAGCCGTTCATTCGAATGCAATTGTGGCTATCCGATGCAAATAATGTGGACCGCTTGCAAGCGTTGAAAAATGAACGACGAGAGGCCAACAAGCGCAGACGTTCTACTGGTCCCGGTGCCCAAGACAACAGCTCAGACACCAGCAGCAATGATACATCCGAATTCTACACATCAAACTCTCCGGGACCTGGATCCGTTGGATCCGGTGCCGGCGGTCAACCACCAAACAAGAAACAGCGTGTCCTTTTCTCCGAAGAACAAAAAGAAGCCCTACGATTGGCTTTTGCCCTTGACCCCTACCCCAATGTGGCCACTATTGAATTTCTTGCCTGCGAGTTGGGTCTCACTACTCGCACCATTACCAATTGGTTCCACAATCACCGAATGCGCTTGAAGCAGCAACACCCACATGGACCACCCAGCGATCCTGTGCCGTCACGTGAAAGTCAATCCGGTGCACAATTTGATCCTGTGCAATTCCGAATCCTGTTGAACCAGAGACTCGTTGAATTGCAAAAGGAACGCATGGGTATGAGCGGACTTCCACTACCATATCCTCCGTACTTTGCTGCAAATCCCAACCTCGCGGCACTAATCAGTCGTGGTTTGTTGCCGGGCACAGAGGCTGAGATGAATGCCATCAATCAGGCGCTCAAAGAGCAAATGAGTGGTTTAGATTTGACAATGAGTTCACTGAAACGGGAGCGTGATGACGATTTTGACGATGTTGTGGATGGTGATAACGATGATGGGTCTGACAATGAATCAATGGATGGCATCGATTTGAAATCAGATTCCACCAACAAAGATCATCCAACGGCGGCTCAAATTCAGGCAGCATCGCGAACATCTCGACGAAAGCCGGCCGCCCCACAGTGGGTGAATCCGGACTGGCAGGATGACAAAAAGGCGGGTCCTAAGGGTCCTGAAGTGATTATCaatggtgtgtgtgtgatgcAACAGGCGGCCGATTACAGTCGCCTGGGTGAAGAAACTGTGCATGTTGAGCCCACTGCCGTCCAAGAGGCGCGTCTCAATAATGACGACGAGGACGATGACGCGGACGATGATGATACCGAAAGCAATGCACCGTTGCCGCCTATTCCAACTGTGTCGCTGGGATTGCAATCCGATGATGAGGATGGTGAGGATGATGATGTGGTGGCGCACAGTCCATTGGCGCATTCGGAAAAAAGTGCTTCTGTGAATGAGGTTGAAAGCGGTGACAAAGAACAGCAACCAATAGTTAAGGAGGAAAAGGATGATGCCGAACGGTGGGATTATTAG
Protein Sequence: MVFWHCEDGDLLSCGAAIVNVVVINALVEEVARLRTALTTLQEAHTSQIQRLEDRLEEKRLHITRLEARLEKHTDLEEKKDISGLSSVDLSTAAAAAAAAAVVADPKQFQELILERTKALAAQIDLPLKSSSDGSSEQHQHGKHSRNTSSQSPTIPAQQQPTVPNHSRTQTPTVQQQLPPLLTPQHLQQQQQQHQAHSLTNNDSHQNSLANYNSSEKSAALIPPSSLQNVDMFSSFLGEEIVNHWRRGLQYAPLMPNPSALDCQLLAANTGFNLISSTSNTTTNTLSTTTSTPTINLTNQHSPPPTDGGLLHVANNAQHTAASLLLQQQQQQQQLQSQQHSQLLPNAIPQQLQPSQLLSHQHHTTSSTAALSANQQQQQHLIDDKSSCHLDASSTASTPVLQDCSRSEDNNHLMNGSGGGLTPLSMSISKSPADHDNNNAGLSVLPQAQSTPTFPLGLPFQFQDRPHFRFAEDLQMPPGTMAGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKGSDSGLPTYGRPDDSMNEDRIAHILTEASNLMKTPEQHRHQAQMQQHHHQMQHQHQQQQQAQQQQQQQQQQQQQQHNQMQLDDSHSNDDSKSPHNQSPSPFSKDLQRRMQKKYENDDISQEKVARIYQEELAKLMSRAPRDAFPGLLFPHFFSAGGMPPTPQQQQQQQQQQQQQQQQQQQQLPAQQMPEENFRLALAAYQREVAKMQQSGATNAIPNFPNLQNILALQQHALNGSVQDLSVKKDSQPHIGMNGQHHQHHPQQSHTPSIDGDSTKDPDEAARHSGSAFSLVRPKQEPGTTPTPSISSAAPSPLSNSILQPAMTPTDDFSSAASPLQRMASITNSLITQSPVNTHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQLSSGMAKQMPPGMPKMMSEMSKLQQEQHIMQIQSQMSHLQAQAQQAAAAAAAQQQAQQQGMLLTPPGMPPHHAITLQTQQEKKAAAAMQMPPVHSPQQNNAMRGMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVDRLQALKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYTSNSPGPGSVGSGAGGQPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLACELGLTTRTITNWFHNHRMRLKQQHPHGPPSDPVPSRESQSGAQFDPVQFRILLNQRLVELQKERMGMSGLPLPYPPYFAANPNLAALISRGLLPGTEAEMNAINQALKEQMSGLDLTMSSLKRERDDDFDDVVDGDNDDGSDNESMDGIDLKSDSTNKDHPTAAQIQAASRTSRRKPAAPQWVNPDWQDDKKAGPKGPEVIINGVCVMQQAADYSRLGEETVHVEPTAVQEARLNNDDEDDDADDDDTESNAPLPPIPTVSLGLQSDDEDGEDDDVVAHSPLAHSEKSASVNEVESGDKEQQPIVKEEKDDAERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01381985;
90% Identity: iTF_01381985;
80% Identity: iTF_01381985;