Scin001465.2
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- kn
- Assembly
- GCA_963854165.1
- Location
- OY974082.1:19579884-19594396[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-232 3.7e-228 758.3 0.0 11 385 19 408 11 411 0.98 2 2 2e-09 1.5e-05 23.2 11.4 422 502 411 494 408 524 0.77
Sequence Information
- Coding Sequence
- ATGTTTGGGCTGCCACCAGGTGGTGATCTCAACCAACCACGCGGACCTGTCACATCGCTTAAGGAGGAACCACTTGGCGCCAGGGCATGGATGCAAACCGCCGATCAAACAAATCTTGGAATTGGCCGAGCCCATTTCGAGAAACAGCCGCCCAGCAATTTGCGTAAGtcgaatttttttcactttgtaATTGCGCTGTACGATCGTGCTGGTCAACCGATTGAGATTGAGCGGACCGCATTCATTGGATTCATTGAAAAGGACTCGGAATCGGACAGCACAAAAACCAACAATGGCATCCAGTACAGATTGCAACTTTTATATGCAACTGGCGCCCGACAGGAACAAGACATATTCGTGCGGCTGATTGACTCCGTAACAAAACAGgCTATTGTCTATGAAGGTCAAGACAAAAATCCGGAGATGTGTCGCGTCTTACTAACCCATGAAGTTATGTGCAGTCGATGCTGTGACAAGAAAAGCTGTGGCAACCGAAACGAGACGCCATCCGATCCTGTCATCATCGACCGATTTTTCCTCAAATTCTTTCTCAAGtgtaatcaaaattgtttgaaaaatgctGGAAATCCACGAGATATGCGACGGTTTCAGGTTGTGATAGCGACGCAGGTGTCGGTGGAGGGTCCGCTGCTTGCCATCTCAGACAACATGTTTGTGCACAACAACTCAAAGCATGGCAGACGAGCGAAACGCATGGACGCCACGGAAGGTACGGGCAACTCACCGTTGGCCATTTCGGGTCACCCACTAGCGCCCGACAGTACGTACGACGGCCTTTATCCACCCCTTCCAGTTGCGACGCCATGCATCAAAGCGATATCGCCCAGTGAGGGTTGGACAACGGGTGGCGCACAAGTCATCATTGTTGGTGATAACTTCTTTGATGGATTGCAAGTTGTGTTTGGCACAATGTTGGTGTGGAGTGAGTTAATTACATCGCACGCGATTCGGGTGCAAACACCGCCAAGACACATTCCCGGCGTGGTGGAGGTGACGCTCAGCTACAAGagcaaacaattttgcaaGGCATCACCGGGTCGTTTTGTGTATGTCTCGTTGACTGAGCCAACAATTGATTATGGATTTCAGAGGTTGCAGAAGCTGATTCCAAGGCATCCTGGGGATCCGGAGAAATTACCAAAGGAGATTATACTGAAGAGGGCGGCTGATTTGGCTGAGGCGTTGTACTCTATGCCACgATCTCCTGGTGGATCAACTGGATTTAATTCATATACAGGACAACTGGCAGTCAGTGTGCAAGACACTGGCGCCCAATGGACTGAAGATGAATACCAAAGAGCACAAAGTAGTAGTGTCAGTCCACGTGGAGGCTATTGCAGCAGTGCATCAACCCCACATTCATCTGGTGGTGGTTCCTACGGTAGTGGAGCAAACGGATACGCACCAACGCCAAATATGGGAACACTGTCATCGTCGCCAGCCAGCGTCTTCAATTCAACATCCAGAGTTGGCGGACTTGTGAGCGGGTTCAATCCGTTCGCGTTGCCCACTTGCAGCACCCAAGGTTACACGCCTAGTCCACTTGTCACATCATCCAAATAA
- Protein Sequence
- MFGLPPGGDLNQPRGPVTSLKEEPLGARAWMQTADQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYATGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLAISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKASPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYTGQLAVSVQDTGAQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGSGANGYAPTPNMGTLSSSPASVFNSTSRVGGLVSGFNPFALPTCSTQGYTPSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -