Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963854165.1
Location
OY974083.1:19293627-19303264[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-24 2.2e-21 75.8 0.0 2 89 275 358 274 358 0.95
2 2 10 1.5e+04 -3.9 0.0 50 65 1203 1218 1200 1225 0.77

Sequence Information

Coding Sequence
ATGGTGTCAAAAAGTGATCGGAATAGCGACTGCCCGTCGGGCTCATCGCTGGTTAGTCAAACACCGACCAGTCCGCTGGCTCCACCCGCCACAGGTGTTACCGGTCAAGAACTAACACCCACACAACGTGCGATACGTGATCGCTTGCATGGTATTGAGACATCATTGCCCGTGGAAGTGTTACGTCTaacccaacaacaacaacagcatccGCCGTCGCCACCAGCATCACCGCCGCCtccaacaataacaacaacaacaacaaccaccaccacaCCATCAACTCCACCAACAACATCAACACATGTCGAACCAATGGCTGGTGGCAGCAACATCACCGCGTGTGCTACGGCACCTGTTATCACTTTTCCCGTCACCTCAACGGTGACGAGCACATCGGCACGACTTTCCAGCAGCATGGCACACCACTCTCATTGTCACACACCCATTTTGGGCACTGGTGTTACCGGATCACCCATCAATCTTGGACATAATCATCCTCCCGTGATGGTGTCCGGTGGCAGTGGTGGTCCAGCTCCACTGCATGGCGGTCGTCATGGTAGTAGTACATTTTCGCTCAATAAAAACGAAGAGTTTGCGTTTACTGTGCCACAAGAAGCACCTACATTTGTGCCATCGGTGGAGGAGTTTCAAAATCCTCTGGCGTATATTGCTAAAATTCGACCCATTGCGGAGAAATATGGCATCTGCAAGATTAGACCACCATCGTGTTGGCAGCCACCATTCACTGTAGATGTGGACAAGCTTCGTTTCACACCACGTGTTCAGCGTCTTAACGAGCTGGAGGCCAAAACAcgcatcaaattaaattttctagaTCAAATAGCCAAATTCTGGGAATTGCAAGGGTCCTCCCTCAAAATTCCAATGGTGGAACGAAAGGCACTCGATTTGTACTCATTGCATCGCCTTGTACAGGAGGAAGGTGGCATGGATCAGGCCACTAGAGATCGCAAGTGGTCACGCATTGCATGCCGAATGGGATATCCGGCTGGAAAAAGTGTTGGAACAATATTGAAGAGTCACTAcgaaagaattttatttccatttgaCGTCTACACTTCGGGCAACAtggttgatttaaaaaagGAAAAATTGGAAATAGATCTAGAAGAGGAACATGACTATAAACCACATGGTATTGTGTCACGTCAACAAATCACACCACCCCCTGAAACAACAGCACGTCGTTCCAAGCGATTCGCACAAAATTCCGATACCAACGCAGTCACAGAAGATTGCAAACTATCAACAAGTGCTCCTGTGGCCACATTCAAGATACCACACGTTGACCCATTGGCACTTCAAGCtgaaatgcttaaaaatgagGATGCCGCTTCGGCGGAATTGCGTCGTCTTCAAATATATGGCGCTGGCCCAAAGATGGCCGGATTCAAGTGCAACAAACCGCGTACACCACCACGTCGTGAAAGTAAGCGCAATTCAAATCCAGATCCCCTCGCCAAGTATGTGTGCCACATTTGTGAGCGAGGTGATGTCGAGGAGGCGATGTTACTGTGTGATGGTTGTGATGACAGCTaccacacattttgtttgattcCACCGCTGAGTGATATACCAAAGGGTGATTGGCGTTGCCCAAAGTGTGTTGTCGAAGAGGTGAGCAAGCCGGTAGAAGCATTCGGTTTTGAGCAGGCTCAAAGAGAATACACTTTGCAACAGTTCGGCGAAATGGCGGATCACTTCAAGTcggattattttaatatgccGGTGCATTTGGTACCAACCGAATTGGTGGAGCGTGAATTTTGGCGCATCGTCTCCTCCATTGATGAGGATGTTACTGTTGAGTATGGGGCTGATTTGCACACAATGGATCATGGCTCGGGTTTTCCCACAAAGAGCTCAATGTATTTGTTGCCCGGTGATCAGGAGTATGCTGATTCCAATTGGAATCTTAATAATTTACCGCTGCTTGAGGAATCCATTTTGGGGCACATAAATGCGGATATTTCTGGCATGAAGGTGCCATGGATGTATGTGGGCATGTGTTTTGCGACATTTTGCTGGCACAATGAAGATCATTGGAGCTATTCGATTAATTACATGCATTGGGGTGAGCCAAAGACTTGGTATGGTGTGCCTGGTGGCAAGGCAGAGGCTTTCGAAGAAACAATGCGAAGTGCAGCACCCGAGTTGTTTCAATCACAACCGGATTTATTACATCAATTGGTCACAATTATGAATCcaaacattttgatgaaagCTGGTGTACCGGTATTTCGCACAGATCAACATGCCGGTGATTTTGTTATAACATTTCCAAGAGCGTATCATGCTGGATTCAATCAGGGCTATAATTTTGCGGAAGCAGTTAATTTTGCGCCTGCCGATTGGATGTCAACGGGACGTGAGTGTATCAATCACTATTCAACATTAAGGCGCTTTTGTGTGTTCTCTCATGATGAGCTGGTATGTAAGATGGCATTGGATCCGGAAAAATTGAATCTCGGTATAGCTACGTCCTGCTACTTAGACATGGTGGAAATGGTTGATTCGGAGAAGAAGTTACGAAAAGCATTGCTGGAGTGGGGTGTGACTAAGGCAGAGCGTGAAGCATTTGAACTTATACCAGATGATGAGCGGCAGTGTGAAATGTGCAAGACAACGTGCTTCTTGTCGGCGGTAACATGCTGCTGCACTACATCACTGGTGTGCTTACGACATTATACCGAACTATGCCAATGTGCACCAGACAAACATTTGCTTAAATATCGCTACACACTCGATGAGCTTCCATTGATGTTGcgaaaacttaaaacaaaggCGGAATCCTTTGAAGATTGGATTTCAAGGTGTAAGGAATGTATCGAACCACCGGAAAAACCAGCCACTAAGCATCTATCTGAACTGCAGGAAATGGCGCAAGAGGCCGACAGGAAAAAATTCCCTAACTCTGTGGTGCTGGATCGTCTTCTTGCGGCTGTTTTAGAGGCGGAAAAATGTGTAACTGTCATACAGCAATTGGACATCAACAAAGTGCGCACTAGAGCTCGTAATTCCAATGAATCAGTTAAGTACAAATTGTCTATTGAGGAACTCGATCTCTTTGTCGAAGAGATCAACAATCTATGCTGTTACATTTCGGAGGGTGACAGCGTGCGTGAGCTACAAAGACTCGGCAAAGTGTTCGTTAAAGACGCTTGTCAATTATTGCATAAAGATTACGCTGAAACCACATCACAAGAGATTGAGCAGTTAATAGAAGAGGGCTCAGCATTGTGTATTGAATTACCGCATATCCTTGAACTGAAGCAGTATAACTTGCAAGTAAGCTGGTGGCATGAATGGGCTGAAATGCAACGTGCTTCTGAAAAACTTCCAGTTGCCGATGTTGTGCGACTATTGCAGAGTGGTCTTAATTTAGATCAAACGCCACAAATAGCAACAGAGATGCATCGTGTGCGTGACTTACTAGTATCCGTTGAAGCCTGGGAGACTGAGGCaaagaaatgttttgaatgtgGCACACAACACGAGATGACAGACATCGAAGCATTATTGGAACGTGCTGAAAAAATTCCAGTTGTGTTAGCATCTGAACAGCCTTTACGTGATGCTATCCGCAAAGCGCAAGAATGGATGCATATTGTGGAGCGTTTACAAGCCAACGAAAGCTATCCCTATATTCATATGCTGGAGAAAGTGGTTAGCAAGGGCAAAAGTATTCCATTTCAGTTGGAGGAACTGAAACGCATGGAAGAGCATCTGCAGTCGGCGCGTCAATGGAAAGATCGAACAAGTCGTACATTTTTGCGTAAGAATTCTATTTTCACACTAATGGAGGCATTGTCACCACGTACCACTGCCGTTATGTCTTTAAAATCCCGCAAAAAGTCCGAGGATTTACAACCACAATGGCCAAGCGACTTGGAGGCTGGTCACATGGTGGTGGCATTTCGTGAAGCTGAAGGCAAGGAGATGCGACAAATGCGTAACTTACGAAACACCAATGAGTCTCGGAATCCGGAATCGGATCGCTACTGTTTGTGTCGACGACGTTTCTTTGGTGTCATGCTGCATTGTCAATTATGTAAAGATTGGTTCCACGAGGGTTGTGTGCCACCTCCCAAAGCAACAGTTCGACCACAAGCAATCAATTCTGATTGTCCCAAAAGTATTGTATCACACAGTACAGATTTAGTGCCACAGCTGACGGCACGAGAACGTGATCGTGCGCCTAAATATTTGTGCCCGTCGTGTATGCGATCGCGTCGTCCACGACTAGAAACAATTCTTTCGTTGTTGGTATCATTACAGCGGCTGCCTATTCGATTGCCCGAGGGTGATGCACTACAGTGTCTCACAGAACGTGCCATGAATTGGCAAGATAGAGCGCGACAAGCACTAGCCACTGATGATGTTGTTGCCTCTTTAGCGGCATTGTCGGTTTTATCACAGAAAGCTGGAGACAACGAGGCTGCTCCAAACGTAGATAGTGGTGTGGCGCAAAGTCCGGTGAAATCGCGACGTCCACCACAAAGTTCAGAGTCTTCAGGTAGCAGTTCGGAAAATGATGAATTGGTCATTGACACAATGCGCATGGATGAAGATGTTTCTATCTCTGGAAATAACTCACCATCCCAGATTGCaAATATTGAACACGCTTACTCAGTGCCACCCACGATTTTACACTATAGCAAAAATGGAAGAGACGTTTCAAAGTCGCAAAACATCCAATCAGACGCCCCACTGATTGATCTGAAGACGGCAACAAGATACCACTTAGAGGATCTAATGATGGAGGGTGATTTGCTGGAGGTATCATTGGATGAGTCACAACATTTGTGGCGCATCCTGAATGCTGCCCAACCCAGTCTTACTGACTTGGCgtacatccaaaaaaaatacaaaatcccCAAGCATCCCAGCATAAGTCTAGTCAGTAATATCAAAAAGCGAAAATCAAGTGATCCATCGTCACCCAAGAAGCCCCTTAAGATAGGACGATCAGGCATAAGCGAATCATCCGACCCGCCAGTAACGAGTGATGTTATTGTTAAGCCAAGTATTGAAACGTCGACTGAAACGATTGATGAAAAGCTACATGAGTTGCCGTTATCTTCTATTATGGATATTGAAACATTAGAGAAACCAGAGAAATTGGAGAAGGTGGAGAAATTAGAAACAACGAACCCAACGCCCGTGCCGGCTAAAATTAAGCGTAGTCGCAAAATGAACATTCTCACCAAAACGGAGAATCTGAATAATTCAGATAATGCGGGAAGCGGTGAGGGTGgtaccaaaaagaaaaagaagcgTGGTCGCAAGAGTTTACATGAGAGTCAACAACAGGCGGCAGCTTCCACCTCAGACGATGATGAGGAGTGCAGTGCTCTTAACTGTGAACGCCCAACAgGTCGTGAAGTTGATTGGGTTCAATGTGATGGTGGTTGCAACAAATGGTTTCATATGTTGTGTGTAGGCCTCGTGAAAAATCAAATTCGCCCAGACGATGAGTTTGTTTGTCGCAAGTGTAAACGAAAAAATAAGAATCCCTCAGCAATTGTGGAGCAAGCTAAACGTAATGCAGATGAGGCAGTTGAAGCTGCTGCAACTGTTATCGATGAACCAACTGAAAATTCAACGACATCTACAGCAACCACTTCCACTGTGACATCTACGATAGATATTGCCAGTATAACACCAGCAACAAAGTCATCGACTGTGAATGCAACAAAATCATCAACAATGACCGCAACAAAATCATCGACAGTGGTAGCAACGTCAACAACCACATCAGCAACAGCATCTGTAACTACAACGAAGTCATCTACAACAGTTATCGCATCCACAACGGCAATAACGACGACAACCACTGCAACAGCTACTATAACGACCATCACACCCGCAAAGTCCTCGACAACAATCATCTCCAGTGAATCGGCCGAAACAGATGATAAGGCACCAACGCCACCACCATCTCCGTTACTACCACCACCatctccaccaccaccatctctaccaccaccaccatctcCAGCGCCACCATCatctccaccaccaccagtcGTAGAACCACCAAAACCACTACCATTCTACCGTTCAGTGATATTTCCTGGTGACCGTGAGAGTgacgatgacgatgatgatggcACACCGTCCAGTGTCATTTGCATGCCTCAAAACGACAGTGACGACGAATGGGGTCCACTGACAATTGACGAGGCAGCCATTGCTGCGGCCGACGTTGCTGATATCGTTGGTGTTACCAGACCTAGAGAGACAACACCACCAAGGCCAATTTTAAGGGAGGAAGACATCATAGCTGGGCGACAAatgccaccaccacctccaccGAGGACACCGACACCTCCACCCGCCCCAAAGACGCCGCCACCAATTCTGGCATCGAAGACAACGCCGAAAGCTACACCAAAAACAGCGGTATCAACACCAAAAGTTTCTGCGGCAGCATCAAAAACAGCAGCGGCAAAAGCAGTAGCATCCGCGCCACCTCCAGCAAGAAGCAGACGCCCTCCACGACGGGTGCAAACAGATGAAACGTCACGAACAAAAGTGACACAAAGTCGTCGCAGAACGAAATCGTAG
Protein Sequence
MVSKSDRNSDCPSGSSLVSQTPTSPLAPPATGVTGQELTPTQRAIRDRLHGIETSLPVEVLRLTQQQQQHPPSPPASPPPPTITTTTTTTTTPSTPPTTSTHVEPMAGGSNITACATAPVITFPVTSTVTSTSARLSSSMAHHSHCHTPILGTGVTGSPINLGHNHPPVMVSGGSGGPAPLHGGRHGSSTFSLNKNEEFAFTVPQEAPTFVPSVEEFQNPLAYIAKIRPIAEKYGICKIRPPSCWQPPFTVDVDKLRFTPRVQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRLVQEEGGMDQATRDRKWSRIACRMGYPAGKSVGTILKSHYERILFPFDVYTSGNMVDLKKEKLEIDLEEEHDYKPHGIVSRQQITPPPETTARRSKRFAQNSDTNAVTEDCKLSTSAPVATFKIPHVDPLALQAEMLKNEDAASAELRRLQIYGAGPKMAGFKCNKPRTPPRRESKRNSNPDPLAKYVCHICERGDVEEAMLLCDGCDDSYHTFCLIPPLSDIPKGDWRCPKCVVEEVSKPVEAFGFEQAQREYTLQQFGEMADHFKSDYFNMPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSMYLLPGDQEYADSNWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPGGKAEAFEETMRSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVFRTDQHAGDFVITFPRAYHAGFNQGYNFAEAVNFAPADWMSTGRECINHYSTLRRFCVFSHDELVCKMALDPEKLNLGIATSCYLDMVEMVDSEKKLRKALLEWGVTKAEREAFELIPDDERQCEMCKTTCFLSAVTCCCTTSLVCLRHYTELCQCAPDKHLLKYRYTLDELPLMLRKLKTKAESFEDWISRCKECIEPPEKPATKHLSELQEMAQEADRKKFPNSVVLDRLLAAVLEAEKCVTVIQQLDINKVRTRARNSNESVKYKLSIEELDLFVEEINNLCCYISEGDSVRELQRLGKVFVKDACQLLHKDYAETTSQEIEQLIEEGSALCIELPHILELKQYNLQVSWWHEWAEMQRASEKLPVADVVRLLQSGLNLDQTPQIATEMHRVRDLLVSVEAWETEAKKCFECGTQHEMTDIEALLERAEKIPVVLASEQPLRDAIRKAQEWMHIVERLQANESYPYIHMLEKVVSKGKSIPFQLEELKRMEEHLQSARQWKDRTSRTFLRKNSIFTLMEALSPRTTAVMSLKSRKKSEDLQPQWPSDLEAGHMVVAFREAEGKEMRQMRNLRNTNESRNPESDRYCLCRRRFFGVMLHCQLCKDWFHEGCVPPPKATVRPQAINSDCPKSIVSHSTDLVPQLTARERDRAPKYLCPSCMRSRRPRLETILSLLVSLQRLPIRLPEGDALQCLTERAMNWQDRARQALATDDVVASLAALSVLSQKAGDNEAAPNVDSGVAQSPVKSRRPPQSSESSGSSSENDELVIDTMRMDEDVSISGNNSPSQIANIEHAYSVPPTILHYSKNGRDVSKSQNIQSDAPLIDLKTATRYHLEDLMMEGDLLEVSLDESQHLWRILNAAQPSLTDLAYIQKKYKIPKHPSISLVSNIKKRKSSDPSSPKKPLKIGRSGISESSDPPVTSDVIVKPSIETSTETIDEKLHELPLSSIMDIETLEKPEKLEKVEKLETTNPTPVPAKIKRSRKMNILTKTENLNNSDNAGSGEGGTKKKKKRGRKSLHESQQQAAASTSDDDEECSALNCERPTGREVDWVQCDGGCNKWFHMLCVGLVKNQIRPDDEFVCRKCKRKNKNPSAIVEQAKRNADEAVEAAATVIDEPTENSTTSTATTSTVTSTIDIASITPATKSSTVNATKSSTMTATKSSTVVATSTTTSATASVTTTKSSTTVIASTTAITTTTTATATITTITPAKSSTTIISSESAETDDKAPTPPPSPLLPPPSPPPPSLPPPPSPAPPSSPPPPVVEPPKPLPFYRSVIFPGDRESDDDDDDGTPSSVICMPQNDSDDEWGPLTIDEAAIAAADVADIVGVTRPRETTPPRPILREEDIIAGRQMPPPPPPRTPTPPPAPKTPPPILASKTTPKATPKTAVSTPKVSAAASKTAAAKAVASAPPPARSRRPPRRVQTDETSRTKVTQSRRRTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-