Scin005842.1
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- Nfil3
- Assembly
- GCA_963854165.1
- Location
- OY974083.1:8711594-8713419[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 8e-11 41.5 2.6 2 55 101 154 100 163 0.89 2 2 0.037 26 4.7 0.0 39 61 553 575 545 578 0.89
Sequence Information
- Coding Sequence
- ATGATGGTGGCGGAATTTGTCGCCCGTCAACAAAGCGGCTCCCCAGTTAACGGAGAGACACCCACACAAAATCATTCAATATCAACGATGCCCTCCAGTCACGGCGGTGGCAACTCTAACTCATCCAACGGCAGCAACATGATGCATTCACCGGATCGTAATCCACATCGCTCCGACAGCTCACTGGCTTATATGTCTGATGGCGGTGGTGGCAGTCATAATTCGCTGCTGGGAATTGGTGGCAACGCGGACTTTTGCTCGCAGCGTAAACAACGGGAATTCATCCCAGACAATAAGAAGGACGACAGCTATTGGGATAGACGCCGTCGCAACAATGAGGCGGCAAAGCGCTCCCGCGAAAAGCGTCGCTTCAACGACATGGTGCTGGAGCAACGTGTTGTCGAGCTAACCAAGGAGAATCACGTGCTCAAGGCACAATTGGATGCAATCAAAGATAAATACAACATTTGCGGTGAGAATTTGGTAAGCGTTGAGCAAATAATGGCGACACTACCGACCACTGAGCAAGTGCTCAGCGTTACCAAGCGGGCAAAGATGTCGAATTCCGTGCCACAATCAATTATGTATCCGGATTCGCCCAGCCCAGTGCCGACATCCGTGATACATCAGCCCATTTCCGGTATGGAATCACCACCACCATCTGGTGTGTTGTCACATCCGCCGCAACAGTcctcaccaccaccaccacctgaGCGACAATCACAGCCATTGACGCCACATTTGGTgccaatacaacaacaacaacagcaacagcatacacatcaaccacaacaacatcaacagcatcaacaacagcatcaccaacaacaacaacaacagcagcaacagcaccaacaacaacaacagcagcaacaacatcatcatcatcagtcGCAACAAATGCAGTCCCAACACAATATTCAGCACGCACAATCACCAATATCTCATCATCACACATCCAActcgcaacaacaacaacagcaacaacaacatcatccCCATCattcacaacaacaacaccaacaacaacaacaacagcaacaacatcatCCAGCGCACCATGCAAGTGCCGCCCATCACGTCCACCACCTCAATCTCCATCATTATCAATCAACACGACCATCCTCAGCAAGTCCGTCACCCCATCACTCCGACGGCATGAGCAATTATCGTGAGGCCGGCGATTATGGTCATCACCACTACACCAGCTACTCCGCTTCGGTGCAGGTGGCCCCAGTGGCGCCAGCCACCCATGTGGGTGCCGCCTCCCCCTATGACGACGACACCGCCTCCATCAGCGTGTTGAATTTGTCACGTCGCGCCCACTCGCCGTACGAGGTGTCCAGTGGCACTGGGTCGGGTGCCGCCTCCGGCACCGATGACGAAGTGTGCGAGAGCACGCCATCGGCGGATTGCAACAACAGTCTGCCATTGAAGTTGCGTCACAAATCGCATTTGGGCGACAAGGATGCGGCCACCGCGCTGTTGGCGTTGCAACACATTAAGCAGGAGCCGGGCTCACGTGCGTCGCCGCCGTGGGATGGTGAGGGCTCCAGTGATGAACGCGACTCGGGCATCTCCATTGGGACGGCCGAGTGGCAGATGGCGCGCAAAGTTGTCATCCAGCAGGCGACATCGCCCACAAATTGTGACAAGGAGGAGAATATTCATTTGAAGACGCAAATCGCTCGTTTGGAGAGTGAGGTGGCCACCATTAAGACAATGATGGCGGCCACAGCGAAGGTGCAGTAA
- Protein Sequence
- MMVAEFVARQQSGSPVNGETPTQNHSISTMPSSHGGGNSNSSNGSNMMHSPDRNPHRSDSSLAYMSDGGGGSHNSLLGIGGNADFCSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELTKENHVLKAQLDAIKDKYNICGENLVSVEQIMATLPTTEQVLSVTKRAKMSNSVPQSIMYPDSPSPVPTSVIHQPISGMESPPPSGVLSHPPQQSSPPPPPERQSQPLTPHLVPIQQQQQQQHTHQPQQHQQHQQQHHQQQQQQQQQHQQQQQQQQHHHHQSQQMQSQHNIQHAQSPISHHHTSNSQQQQQQQQHHPHHSQQQHQQQQQQQQHHPAHHASAAHHVHHLNLHHYQSTRPSSASPSPHHSDGMSNYREAGDYGHHHYTSYSASVQVAPVAPATHVGAASPYDDDTASISVLNLSRRAHSPYEVSSGTGSGAASGTDDEVCESTPSADCNNSLPLKLRHKSHLGDKDAATALLALQHIKQEPGSRASPPWDGEGSSDERDSGISIGTAEWQMARKVVIQQATSPTNCDKEENIHLKTQIARLESEVATIKTMMAATAKVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -