Basic Information

Insect: Sycophila texana
Gene Symbol: stc
Assembly: GCA_035582955.1
Location: JAWWEN010054137.1:1-3571[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.2 2.5e+04 -3.8 1.6 15 19 540 544 539 544 0.81

2 12 0.19 1.5e+03 0.2 0.1 4 10 573 579 572 580 0.94

3 12 0.0002 1.6 9.6 18.0 4 18 590 604 588 605 0.94

4 12 3.4e-07 0.0028 18.5 15.8 1 19 641 659 641 659 0.98

5 12 0.3 2.4e+03 -0.5 2.1 1 10 668 677 668 677 0.92

6 12 1.1 9.1e+03 -2.4 0.8 6 10 687 691 686 691 0.89

7 12 1.8e-09 1.4e-05 25.8 16.7 1 18 697 714 697 715 0.98

8 12 4 3.2e+04 -5.6 4.1 5 12 744 751 744 751 0.86

9 12 2.1e-06 0.017 16.0 13.3 4 18 762 776 755 777 0.85

10 12 2.1 1.7e+04 -3.2 2.0 5 10 806 811 806 811 0.93

11 12 0.032 2.6e+02 2.6 12.1 1 11 817 827 817 839 0.88

12 12 1.3e-05 0.11 13.4 8.7 1 12 844 855 844 855 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.2	2.5e+04	-3.8	1.6	15	19	540	544	539	544	0.81
2	12	0.19	1.5e+03	0.2	0.1	4	10	573	579	572	580	0.94
3	12	0.0002	1.6	9.6	18.0	4	18	590	604	588	605	0.94
4	12	3.4e-07	0.0028	18.5	15.8	1	19	641	659	641	659	0.98
5	12	0.3	2.4e+03	-0.5	2.1	1	10	668	677	668	677	0.92
6	12	1.1	9.1e+03	-2.4	0.8	6	10	687	691	686	691	0.89
7	12	1.8e-09	1.4e-05	25.8	16.7	1	18	697	714	697	715	0.98
8	12	4	3.2e+04	-5.6	4.1	5	12	744	751	744	751	0.86
9	12	2.1e-06	0.017	16.0	13.3	4	18	762	776	755	777	0.85
10	12	2.1	1.7e+04	-3.2	2.0	5	10	806	811	806	811	0.93
11	12	0.032	2.6e+02	2.6	12.1	1	11	817	827	817	839	0.88
12	12	1.3e-05	0.11	13.4	8.7	1	12	844	855	844	855	0.96

Sequence Information

Coding Sequence: ATGGCTACCTGGGATGGCTCTTTCCCAGAGCCAGATGGATCCAATTATTACGTTAGTTCCAATAGCAGTCATACAGCTGGCAATGTTACAACGTGGGACTATTATGTGCCCAATGTCAGCAATGGATACTCCCAGAGTGCGACGACTCCTTATGCACTTGATACCATGGTCTTCGAGCAGAGCGCACCAGCCTACTACAATCAAGTTGACAGAAGTGCCATTCCACCGTTGATGCCGGGTGCAGCCAGTGCCAATGAGTACGGGGGTAATGTGGTGCAATCTGCTAAAAACAAAactaCTACGGTAATAAATAAGACGCACCTCAATGCTCCTCCTAATAGTCAAtgcttttatgaaaataataagccATTAGCACAGCAAGCTCCAAACTATTATTACAATAAGAGTAACAACTACCAGAATGGTACAAAACGCAAGGATACCAACAAGTCTTATCAAGTTTCTGATTTAGCCGAGCATTCAAATTTGCATGCCACTGCTAGTGAATTTATTCCAAACCAAAATAAACGAGATAGAATGATTTCATCAAATATAAACAAAGGTAATAGAAGCCGAACAAATATAGATCATCAAAATCAAGATACCAATCAAGCCACAAGCAACGTGTTCTTTGAAGATAATAAAGTAAGATATAACgataagaaatttgaaaataagagAGATGCCGGCAAAAGGTGGAGAGATACACAGAATAGTCAACATCAGAATTTTAAGGATGAAAAGAAAGATTATAACAGAAATCAAAATTCTCAAAGATATCAAAATGATCGATTCAATCGCAACAGAAACTTTTCTGATAAACCAAGGAATAATCGATCAACTAAAGATAATGTAGAAAGTACTGCTTCtgaaagtaataatataaatgttgaagaggaaaaaattactgaaactCAAGATAATTCCACTAACAGTAATTCTGCTAATATCAGTAACTTGTCTCCTGAAACAGATAACGTGCAgtctgtaaaaaattctaaatcattttcaaatcATAATCGTGGAGATCGACATTATGATAGAAAAGAGCGATATAATCCTAAAGATCCTAGAGATAGGAAAAGTAATTACCctgaatataataatagttatggtagaaataattataacagagaaaataactataacagagaaaataactataacagagaaaataactataacagagaaaacaattatagcagagaaaataattataacagaGAGAACAATTATAATAGAGAAAACAATTATAACAGAGAAGGCAATTACaacagagaaaataaatatgaacgAAGAGAAAATAGGAATTCAACTGTGGAAAATCGAGACAAGTCAGAAATAACTGATTGGAGGCAAAGAAGTAATAATGATACAggaaataaaagtacattgCTCAAACGCCCttactacaaaaaatatgaacCTGatGATGATGCAAGTCAAAGGGAAAGGTTAACAGAGCAGTTGAACCGCGGCCAATTAGAGTGTTTAGTTTGTTGCGAATCTATAAGACAAACTGACTACATATGGTCGTGCAAAAATTGCTACCACGTCTTGCATTTGAAGTGTACTCAGAAATGGGCTTTATCTTCGAAAGGggagaGCGGTTGGCGTTGCCCGGCATGTCAGAATGTGACCTCAGTCGTCCCCTCGGACTACGAGTGCTTCTGCGGCAAGACGAAAGCGCCGGAATGGAACCGTCGCGACATCGCCCACTCCTGCGGAGAGATCTGCGGCCGATCGCGCTCGGACACCGGCTGCGTGCACAAATGTACGCTGCGCTGCCATCCGGGCTGTTGTCCGCCCTGCGTGGCCATGGTCACCAAGACCTGCGGCTGTGGCCGCATGTCCCGCACTCAAAAGTGCAGCACGGGGCCGCTACTGCAGTGCGACGAGATATGCGATCGCGTGCTCAACTGCGGCGAGCACAAGTGCGAGGCCAAGTGCCATCACGGCAGCTGCGAGTCCTGTAGCAAGGTGGTCAAGCAAGAATGCTACTGTGGAAAGCACAATCGAGAAGAAACGTGCGTCTTGGATTTGCCTCCTATGTACTCATGTGAGAACGTGTGTGATAAAGTGTTAGATTGTGGTAATCATAAGTGCAAGGAGACCTGCCATCCTGGCGAGTGTGGACCTTGTGCTTTAAAACCTGAGACTGTTACACATTGCTGCTGCAAACAAACTCTGTTGACTGTTAAGAGGGAGAGCTGCTTAGATCCAATCCCCACTTGTGATAAACAGTGCTGCAAGCGGCTAAAATGTGGTCAACCAAGTAATCCTCATACCTGCCAAGCAAACTGCCACGAAGGTGACTGTCCGGAGTGCGAACTGATAACTAAAGTGAAGTGCCGCTGTGGTCACATGGATAAAGAAATTCCCTGCAGAGAATTGACAACCAAGGCTGACGATGCACGTTGTGAAAAGAAATGCACAAAGAAACGTTCTTGCGGCAAGCACAAGTGCAATCAAATGTGCTGCATTGACATTGAGCACATCTGTCCTCTTCCGTgctcaaaaaatttaagctgCGGTAGGCACAAGTGTGAACAAACTTGTCACAGAG
Protein Sequence: MATWDGSFPEPDGSNYYVSSNSSHTAGNVTTWDYYVPNVSNGYSQSATTPYALDTMVFEQSAPAYYNQVDRSAIPPLMPGAASANEYGGNVVQSAKNKTTTVINKTHLNAPPNSQCFYENNKPLAQQAPNYYYNKSNNYQNGTKRKDTNKSYQVSDLAEHSNLHATASEFIPNQNKRDRMISSNINKGNRSRTNIDHQNQDTNQATSNVFFEDNKVRYNDKKFENKRDAGKRWRDTQNSQHQNFKDEKKDYNRNQNSQRYQNDRFNRNRNFSDKPRNNRSTKDNVESTASESNNINVEEEKITETQDNSTNSNSANISNLSPETDNVQSVKNSKSFSNHNRGDRHYDRKERYNPKDPRDRKSNYPEYNNSYGRNNYNRENNYNRENNYNRENNYNRENNYSRENNYNRENNYNRENNYNREGNYNRENKYERRENRNSTVENRDKSEITDWRQRSNNDTGNKSTLLKRPYYKKYEPDDDASQRERLTEQLNRGQLECLVCCESIRQTDYIWSCKNCYHVLHLKCTQKWALSSKGESGWRCPACQNVTSVVPSDYECFCGKTKAPEWNRRDIAHSCGEICGRSRSDTGCVHKCTLRCHPGCCPPCVAMVTKTCGCGRMSRTQKCSTGPLLQCDEICDRVLNCGEHKCEAKCHHGSCESCSKVVKQECYCGKHNREETCVLDLPPMYSCENVCDKVLDCGNHKCKETCHPGECGPCALKPETVTHCCCKQTLLTVKRESCLDPIPTCDKQCCKRLKCGQPSNPHTCQANCHEGDCPECELITKVKCRCGHMDKEIPCRELTTKADDARCEKKCTKKRSCGKHKCNQMCCIDIEHICPLPCSKNLSCGRHKCEQTCHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01381021;
90% Identity: iTF_01381021;
80% Identity: -