Stex007952.1
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- pnr
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000048.1:12551159-12560266[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-18 3.3e-14 53.0 2.6 1 34 169 201 169 203 0.96 2 2 3.3e-19 1.3e-15 57.5 5.8 1 35 228 261 228 262 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGCGGGAGCGGCGGCTACGGCGCGAGTTCTGAGTATCAGCAACAGACGCAGCAGgctcagcagcagcagcaacagcagcagcagcacgcCCAGCAGCTTCAAGCTCCCGTCTATGTGCCTTCCTCGAGGCCAACCTTACCCTCTTCAACCACGGCGGCCCAGTACCACTCGTTTCCCGGTTCCGCCTCGCCGGCCTGGGAGAAGACGGCGTCGTGGCAGCACGGTGTCGACTCTTACGCGCACCATGCCCTGGCTAGTCACACGAGCGGCTCGACGGGCGGAATGGGTCCGCACGCGGGTCACGCGCATCCGCACGCCGCGCACCCGCACACGGCCCACCCGCACAGCAgcctcgccgccgccgcggcatcGCCCTTCTACGCCCAGAACGTCGCGATGATGTCCTCCTGGCGGGCCTACGACGGCACCGGATTCCAGCGCGCCTCGCCCTATGACACGGCTATGGACTTTCAGTTTAGCGAGGGTCGTGAGTGCGTAAATTGCGGCGCCATTTCGACTCCGCTGTGGCGACGCGACGGGACCGGCCACTACTTGTGCAATGCCTGCGGCCTTTATCACAAAATAAATGGCATGAACCGTCCCCTCATCAAGCCCACGAAGCGCCTGATCTCCGAATTCCAGACGGCCACGAGGCGGCTGGGCCTGTGCTGCACGAATTGCGGCACGCGCACGACGACCCTGTGGAGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTTCAAGCTCCACGGTGTCAATCGACCGCTAGCCATGCGCAAGGACGGCATACAGACTCGCAAGCGCAAGCCGAAGAAGACGCCGGAGCCGAACGCACGGCAGCCCACCGGCGAGCACGACAACAGCACCTCCACTGCGTCCTCGCCCTCGAATGAGCTCAAGAGCAGCCACCACCAGTCGCaccagcaacaacagcaacagcagcaaccacaacagcaacagcagcagccgcaCCAGCACCAGCTGGACAGCAAGTCGTCGGCGAACTCGACGAGCTCGTCCTCGGAGCGTCCCGTGTACTTGGGGCACACGTCGCTGCTGTCGTCAAGCGCCGCGAGCGCCGGCGGGGGTGGAggtggtggcggcggcggcatcCCGACGGTGAAGACGGAACCGCGCAGCTGCGACGGGGGCGTCATCGGCCAGGCTTACCCGGCCTACTACCAGCACCCCCACCAGTTGGCCGCCTCGACGAGCGACCACCAGCAGGCGAGCTACTACGCCGCCGCCCAGGAGGCGCCTTACCATCACCAGCACCACGTCACCGCCGCCGCCAAGCTTCTCGCCTCCTCCTAG
- Protein Sequence
- MFHGSGSGGYGASSEYQQQTQQAQQQQQQQQQHAQQLQAPVYVPSSRPTLPSSTTAAQYHSFPGSASPAWEKTASWQHGVDSYAHHALASHTSGSTGGMGPHAGHAHPHAAHPHTAHPHSSLAAAAASPFYAQNVAMMSSWRAYDGTGFQRASPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARQPTGEHDNSTSTASSPSNELKSSHHQSHQQQQQQQQPQQQQQQPHQHQLDSKSSANSTSSSSERPVYLGHTSLLSSSAASAGGGGGGGGGGIPTVKTEPRSCDGGVIGQAYPAYYQHPHQLAASTSDHQQASYYAAAQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714056;
- 90% Identity
- iTF_00714056;
- 80% Identity
- -