Basic Information

Insect: Sycophila texana
Gene Symbol: SMARCC2
Assembly: GCA_035582955.1
Location: JAWWEN010000048.1:622274-627016[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.5e-15 5.9e-12 46.3 0.2 3 44 628 669 626 671 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.5e-15	5.9e-12	46.3	0.2	3	44	628	669	626	671	0.95

Sequence Information

Coding Sequence: ATGCTATCGCTCGGCCCAAAGAAGGACGGCGGACCGAACCTCAAGTTCTTCGACTCGTCGGAGGTGCTCGCCCAGCTCGACTCCGTCAAGCAATGGCTCCTGAAGAACGCCAAAAAGtatattCAAACCGATTTGCCAACAAACAAAAGTTTGTCTACtttaattgtacaaattttacaatttcaagaAGATAATCttggaaaaaatgttactaaacCTCCTATGACAAGGATTCCTATGAAAtgctttttagattttaaaccTGGGGGTGGATTATGTCAGATTTTATTAACAGCTTTTAGGTTTAAACAAGAACAAGGATGGCGGCGATTCGATTTTCCAGTAGGAAAGtctgGTACTCGCATGGATAGGATGGTAGAGATGCTCATTGCGATAGAAAGAGCATTAATTACAAGTCGATGTTTTATTGTACCAAGTGTTTTTGTGAGGTCAGATATAGATAAAGCTACTGCAGCAAAAGTTAAAGAATTAGTACGGCGTCATCAAGGTACAATAGCAGAAAATGAAGATGATGCTACTCATGTGATTTATCCTCCAGCTGATCCTTTAGAAGAAGAATATGCAAGACCGTGTTTCCGCAGAGAGCGGTGGGTTTTATTGCACTGGTATTACTTTCCAGACAGTTACGATTCCTGGGTGAACATTGATCTTCCATGGGATTATCCTGAAACAGCTCTTGGAAACTTGGCCACAAAGTCAACGTATAAAGTTTCTGCTACATGGGCACTAGATTTAGAACAATATAATGAGTGGATGAATGAAGAAGATTATGAAGTAGATGACAGTGGTCAGAAAAAAGTGCACAAGTTTAGGTTATCAGTTGAAGATCTAATGGCCCAACCAGCTCCACCTTCATCAgctaaaaagcaaaaaaggaaaaggtcGCCTACTCCTCCTCCAAAACttggtaaaagaaaaagtggCCGGGCCCCAGCAAGCGTCCAAGGTTTAAACGCATCAACAGGTCCAAAGAAATCTCGTGGTGGTGTTGATGAAGAAGAAGATTTAACTCAGGGAATGGAGGATCCACCTGCAGAACCCAGGATAGTAGAAGTAGTGGCTTCCAATGCCAATGCAACTAACTCAGGACAAAATAGTTCATCTGGTATAGTTTCTGGTAGTAAAAAGGATAATGAATTACAACCTCTGAAATCAGGAAACATGGCTGATCTTGATGAGCCTGCAGAAGGTGATAAAAGTAATTCACAAACGTCTCAAGATAGAGAAGAACGAGATACTAGTAAAGAAAGGGGTGATGGCAGTAAAAGTGATGAACCAGAAGATAATGTCACAGAACAAACTCATCATATTGTTGTACCTAGCTACTCTGCATGGTTTGATTATAATTCAATACACACAATTGAAAAGCGTGCTCTTTCCGAATTTTTCAACGgtaaaaacaaatcaaaaaCGCCAGAAATCTATCTAGCCTACAGGAATTTCATGATTGATACATACCGACTGAATCCTACTGAATATATTACATCAACTGCATGCAGGCGTAACTTGGCTGGTGATGTGTGTGCGATAATGCGTGTACACGCCTTCCTGGAACAATGGGGATTGATCAACTACCAAGTTGATGCGGACTCACGACCAACACCTATGGGTCCTCCACCTACTTCACACTTCCATGTACTCTCTGACACACCATCAGGGTTAGCTCCCGTGAATCCAAATCCACCAAAAACTCCTCAACCATCAGCAGCGAAAAATCTCCTTGATCTTGAAAAGAAACCCATCATCGGAGACGACAAGCTACCTTTGGCTGGGCCTATGGCTAACTTCGGTCTTAAAATTGATCAGTACACAAAGAAACCTTCTGTACTCAAGAACAAACAAGCCGCTGGAGCAACGCGCGATTGGACGGAGCAAGAAACGCTGCTGTTGCTCGAGGCACTGGAACTGCACAAAGACGACTGGAATAAGGTATGCGAACATGTAGGCTCCAGAACACAAGATGAGTGCATTTTGCACTTCTTAAGACTACCCATTGAAGATCCGTACTTGGAAGAACCCGAAGGTCTGGGTCCATTGGCTTATCAACCAATTCCGTTCTCTAAAGCCGGCAATCCTGTTATGAGTACCGTCGCATTTCTTGCCTCAGTAGTTGATCCACGAGTAGCAGCGAGTGCAGCAAAGGCTGCAATGGAGGAATTCGCAGCAATCAAAGACCAAGTACCAGCAAATCTTTTGGATCAACATTTGAAGAATGTTCACGCTAGTGCGAATTCTGATGGTAAATTCGATCCAACTGCAGGTTTGGCACAGTCAGGTATAGCCGGCACGGAACCTCCTGAACCACCGGAAGAAGGCGCTAACGCACAAAGCTCAAGTCAATCTGCATCTTCGTCTGCAACGTCGCCGCAAGCATCTGCTTCGACACCACCCGATGCCAAGAAAGAAGAAGGCGCGTCTGAAAAGCCCAAGGAAACTAAGGAGGAGGGCGAAACGCCAAATGCCGATGCTGCTACGCCCACTCCCACTGTAAAGAAAGATGAAGATGCTATGGAAACTGAGAATACAGAACAGCAACCAACACCACAACAACCGAAAACAGATCAACCTGAGTCCGAAAAGATGGAGGTAGAAACGAAAGAAGGCGAGGAAAGTGAAGAAAAGAAGGTTGATAGTGAAGAGAATAATGAAGCCaaggaaaagaaagataagGTTGTAAGAGACGCTCAACTACAGTCAGCGGCGGCAGCAGCGTTGGCAGCTGCAGCCGTTAAAGCGAAACACTTAGCAGCTgtggaagagagaaagatcaAATCTCTTGTGGCTTTACTCGTCGAGacgcaaatgaaaaaactagAAATAAAACTGCGGCACTTTGAAGAATTGGAAACGACGAtggagcgagagcgagagggccTCGAATATCAAAGGCAACAGCTTATTACGGAACGACAGCAGTTCCACCTGGACCAACTGAAAGCTGCAGAGTTCCGGGCGCGACAGCAAGCGCACCAAAGACTCGCTCAggagcagcagcaacagcaacagcagcagcaacaacaacaaaatcaACATCAACCGCCTTGGCCACCAGGCGGCAATTCACAGCAGCAGGTGCAACCGACGCCGCCGCAGCAAGGACAGCCTCCGAGTCCGCAAGCTCAGCCACAAACGCCTCCGCAGCAAACGGCATAA
Protein Sequence: MLSLGPKKDGGPNLKFFDSSEVLAQLDSVKQWLLKNAKKYIQTDLPTNKSLSTLIVQILQFQEDNLGKNVTKPPMTRIPMKCFLDFKPGGGLCQILLTAFRFKQEQGWRRFDFPVGKSGTRMDRMVEMLIAIERALITSRCFIVPSVFVRSDIDKATAAKVKELVRRHQGTIAENEDDATHVIYPPADPLEEEYARPCFRRERWVLLHWYYFPDSYDSWVNIDLPWDYPETALGNLATKSTYKVSATWALDLEQYNEWMNEEDYEVDDSGQKKVHKFRLSVEDLMAQPAPPSSAKKQKRKRSPTPPPKLGKRKSGRAPASVQGLNASTGPKKSRGGVDEEEDLTQGMEDPPAEPRIVEVVASNANATNSGQNSSSGIVSGSKKDNELQPLKSGNMADLDEPAEGDKSNSQTSQDREERDTSKERGDGSKSDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKNLLDLEKKPIIGDDKLPLAGPMANFGLKIDQYTKKPSVLKNKQAAGATRDWTEQETLLLLEALELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEPEGLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPANLLDQHLKNVHASANSDGKFDPTAGLAQSGIAGTEPPEPPEEGANAQSSSQSASSSATSPQASASTPPDAKKEEGASEKPKETKEEGETPNADAATPTPTVKKDEDAMETENTEQQPTPQQPKTDQPESEKMEVETKEGEESEEKKVDSEENNEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLDQLKAAEFRARQQAHQRLAQEQQQQQQQQQQQQNQHQPPWPPGGNSQQQVQPTPPQQGQPPSPQAQPQTPPQQTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01468781;
90% Identity: iTF_00714312;
80% Identity: iTF_01380539;