Stex008021.2
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000048.1:13329601-13347613[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 2.5e-14 53.5 0.1 1 45 499 544 499 544 0.96 2 2 3.3e-18 4.6e-15 55.9 0.0 1 43 996 1039 996 1041 0.94
Sequence Information
- Coding Sequence
- atggcgGATTGCCCCTATGCCCGCTGCATACAGGAACGAAAACACATTCGCCGTGAGTTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTCGGTCTCGAACGGGTCGCAGAGGAGTTGATGGGACGTAGGAGATGGAAGCAGTACCAGGACACCCGTTACACCGGCACTCGCATCACCGACGACGGGTCCACGCCgagccagcagcagcagcagcagcagcagcagcagcagcagcagccgcagtcgcagccgcagcagcaccagcagctCCAACTGCAGCTCCAGCAACTCGGGCAGGTGCAGCAGGCGAAGCCGGGGGACTCGCCGACGCAGCCGCTGAAGGCGAGCCTGGCGAACAAGCACCGGGCGTCGGAGGTCAACTGCGTTGGCGAGCGCTCGCCACAGCGCGGCGACGAGACCGCCGCGGCGCTGGCGGTGACGGCCGGCCCCGAGAACGGCCGGCTGGCCGAGGCCGCCCGGGAGATCGGCCGCGAGAACGGGGCGGCAGGCCGGCATAGCCCGACGCCCGAGAGCCTCGCGCAGGCCGCCGAGCCCTTGGGCGCGGAGGCCACCGAGCCGGAGGCCGCCGGGGCCGAGAGGATCAAGAGGGAGCGCCTCGAGGAGAGGACGAGGCTGAGCCCGCGGCCGGAGGAGGAGGCCGAGCAGCAGCGGCCCGCGGACGGAGCCAAGGTAGGCAAGAGCCCCCCCTTTGCGCAGGAGGTGAAGGAGGAGCCGCGGCCGACGCCGGGCCTGCTGCGAGtgaagaaggaggaggagctGCAGGAGACGCCGGGCCCGGGGGGAGGAGGCCTCGGGGGCGCTCTCCTCGCTCCCAGCAGGCCGACCTCGACGCCGGCCACCGGCAGCTACAGCAACGGGCCGAGCGCCGAGTCGCGCAGCGCCTCGACCCCGCCGAAGAAGGAGCCCGGCTTCTGCGCGCCCTCGTACCTCCTGGGTCGCCGGGCGAGCCCCCCGCCGGAGGACTGGAAGCCCTTGGACAAGTGCTACTTCTGCCTCGATGGCAAGCTGCCGCACGACGAACAGCCGCCACTCAGTCCTCAGAGCGACAGCAGCAACAGCTCGCGCTCGGCCGAGTCGCCCATGTCCGTGCAGGTAGACCCGATGGCGGCGACGGTGGTCGCGGCCGCCCTCACCGGCACCTATCCGACTCTGCTGCCGCAGTGGTGTCTGCCGCCCCGAGAGCCAGCCCACCTCGTGCCCGGGCAGCAGCACGTGGACAGCGTCGCCGTCGGCACCGATCAGCCGCTCGACCTCTCCGCTAAGCCCAAGAGTTCTCAGGATAACAACATATCTATTTTGGATCAACAGAAAACACCCCTTCGCTTGTCCGCGGGCATCGATCCAAAGGCCATTTTCAACGCGTGCTACCGAGCCAAGCCGCGAGTGACGGGCCCAGTGGCAGGAGTCTCGCTGGTGGGAGGCGGCACCGGGGGCGGCGGGGGCGGCGGGGGTGGTGGACGGCGCACCTACACGGAGGACGAGCTGCAGGCGGCCCTGCGCGACATCCAAAGCGGAAAGCTCGGAACCAGGCGAGCGGCCGTCCTCTACGGCATCCCGCGCAGTACCCTCCGCAACAAGGTCTACAAGCTCGCAATGGAGCGCGAAAGGGACGCGTCCCTCACGGCGGCGAGCCTCGCCGGCACACCCCCGTCACACAACAACGACATCAGCCAGGTGGCGACGGCGACGGCCAAGGCGGAGGCCGCCTGCTTGGCCAGCACCATCGCCACcatcaccaccaccaccaccaccaccaccactaCCATCACACCAAATACCAACCTCCGACAAAACGCCACTCCGCTCCCGCAGGTGGATGAGGTGGACGACAAGGAGCTGTCGGGGGCAGAGGACGAGAAGGAGGTGGAGAAGGCCTTGAAAAAGCCGCTGCTGACGCTCGAGGACTTTCTAAGGATTTCTAGCCTCGAAGGTAGCGGAGGCGAGTCCCTCAGAGCGTTACTGCAACACGGCAAGGAGGCCGGCGCCGTTGCGGAGTGGTCGCTATTCGACCACGCCAGTTTTGGCCCTTACATACAGAAGATGCTCGCCGCTGCTGCACCCTTCAAAGGCTTGGAAACACAAGATTATCGCATTCCCGAGGTGATGCGCCGGCTAATGTGCGAAGATAAGAAACTGAGCAAAGAGGCTAGTATGAACGGCGACCAGGTCCAACAGCTCCATCATGCCTCTTTGCAACATCGCCTTCCGCAGTCGGGTCAGCGTCCGCCGATGACTAACGACGACTTCAACCCGACGATcgaggaggaggcgagcgaCAGCGCGCAGGGCCGAGCCATCCTCAAGATTCCGTCCTACAAGCCGGCGAGCAGCGGAGCCAGCGCAGGCAGCGGCGCCTCGGGGGCGAGTAAGAACGGCGCGGAGCTCGCCCCGGCGCAGGGCTTCGTCGGCCAGCTGGTGAACGCGGTCGCGGCTAGTCCCGCGGGCCTCCTCGAGCAGCGCACCAGTCCCGCCTTCTCCGGCACCAGCTCGCCCACCAACTCGCTCGTCGGCAAAGCCATGCCCGTCAACTTTCGCGACGTCATCGCCAAGAGCATTAGCGTCAAGTTCCAGGAGGGCCAGTCGCCCGGCAGCATAACAGGTATACTCCTACCGTCGGCCGTCCTTCACGCGCCAGCCAAACAAACAATAGACTTCTGCATAAGGAATTGCTTCGTCCGGCCGCCAAGCGAGACTAACCGGACACGAACCTTTTCAGGCCAGCCAGCGCCAGCGGGCCAGTCTCTCATCGCCGAGCCGAACCCCTACAAGCGGGGCCGGTACACGCCGCCGCAGCCGGCCCAGAGCGGCCAGTCGCCGGCGCAGCCGCAGCCGCAGCAGGCGCCTCCGGCGGCGGGGGCGCAGTCGAAGGCGGCCGCCAGCCAGGCCCAGGACAAGCAGCAGAGCAAGCCGAGCACGGGCGGCAAGGGGACCAGGCCGAAACGCGGCAAGTACCGGAACTACGACCGGGACAGCCTCGTCGAGGCGGTCCGGGCGGTTCAGCGCGGCGAGATGAGCGTGCACCGCGCCGGCAGCTACTACGGCGTTCCACATTCCACTCTCGAGTACAAAGTGAAAGAGCGCCACCTCATGAGGCCCAGGAAGAGGGACCAGAAGCAGCCGGACGACAAGGCGAAGGAGACGACGGCGCCGGGGGCGAGCATACGGACGAGCGTCGCGCCGACTCCGGACAAGAAGCCCATGCTGAAGCCGCAGAAGCCCTTCGCTCCGAACGCCGGCGCGGCCGGTCTGCCCGGGCCGAACGGCCTCAAGATGCCGGCCTTCATGGACGGCATGGCCCACTTGCCGTTCGGCCACCCCTTCAACTTCTGGGGGCCGACGCCGTTCATGCCCTCGCCCTTCATACCCGGTGCTCCGAACGTCCCGGGCATCCTGCCCGAGCAGTACTTCGCCTCGCAGCGGATGCGCGGCCTCCAGGAGCAGCGCAGCGCCATTgttcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcatcgcGACGGCACGGCCAGCGAACAACCCGGTACGTCGAATTCGAGGAGTGGCGCGCTGATCAAGTCCCCGCGCGAGATGGCCGAGAGCCTGTACGACGGAACGGCGAGCAACGGGAGCTTTCTGGACAACCTGATAAGGTCCAGCCTCGAGTCGGGGatgccgcgcgagcgagcgatcgCGGGCCAGGCGGCGGCCCAGCCCCCGTCGCAGCAGGCGGACAATCTGGCCGGCGCCGGTGCCGGCGGCAAGGCGCTCATCGAGCAGCTGTGCCGcagctcgcggcgcgcgcagcAGGACAGCAGCGAGGACGAGGCAGCTCCGGGTTACAAGAGGCCCCAACCTGAACGCCCAGAGCGCGTTCCCACGGTCGAGCTGAGCCCATCCCCGTCGGATCGGGCGCGCACCACGGACGAAGGCAGCGAGCGCGGCCTCACCTCGCCGCCGACGCCCATGTCCCTCTCGAGGCTCAGTGGCTCCGGCAGGGACGACGAGACGACTCGCGACTCTAGGAGCAGCCGAGAGCGCGAGGTCCAGAACGGTGGTGGAAGCGAGAAAGCGGACGAACGTCCGGAATCGAACAACAGCAGTGGCTGCGGTAGTAGCAGTGCCAGCAGCAACGGtaacagcagcagcaaaaaGTTAAACCACTACCCAGAGCTACAGAACCTCTACACCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAAGGATTGCAACACAAGGATTACGTGGCGGAGGCCGGGCTCGTGGCGCAGCTGCAGCGCGGCCTCGGCAACAACGGTAGCAACGGTAGCAGCGGTAGCAACGGTAGCAACGGTAGCAACGGTAGCAACGGTAGCGGTAGCAGCAGCCCGACTAATCAGCCGTCGGCGGCCTCGCAGGAGCCGAGGAGcccgcagcagcagcggccAACGACAATGGAGGAATCGGTTGAGCAGTAG
- Protein Sequence
- MADCPYARCIQERKHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTRYTGTRITDDGSTPSQQQQQQQQQQQQQPQSQPQQHQQLQLQLQQLGQVQQAKPGDSPTQPLKASLANKHRASEVNCVGERSPQRGDETAAALAVTAGPENGRLAEAAREIGRENGAAGRHSPTPESLAQAAEPLGAEATEPEAAGAERIKRERLEERTRLSPRPEEEAEQQRPADGAKVGKSPPFAQEVKEEPRPTPGLLRVKKEEELQETPGPGGGGLGGALLAPSRPTSTPATGSYSNGPSAESRSASTPPKKEPGFCAPSYLLGRRASPPPEDWKPLDKCYFCLDGKLPHDEQPPLSPQSDSSNSSRSAESPMSVQVDPMAATVVAAALTGTYPTLLPQWCLPPREPAHLVPGQQHVDSVAVGTDQPLDLSAKPKSSQDNNISILDQQKTPLRLSAGIDPKAIFNACYRAKPRVTGPVAGVSLVGGGTGGGGGGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDASLTAASLAGTPPSHNNDISQVATATAKAEAACLASTIATITTTTTTTTTTITPNTNLRQNATPLPQVDEVDDKELSGAEDEKEVEKALKKPLLTLEDFLRISSLEGSGGESLRALLQHGKEAGAVAEWSLFDHASFGPYIQKMLAAAAPFKGLETQDYRIPEVMRRLMCEDKKLSKEASMNGDQVQQLHHASLQHRLPQSGQRPPMTNDDFNPTIEEEASDSAQGRAILKIPSYKPASSGASAGSGASGASKNGAELAPAQGFVGQLVNAVAASPAGLLEQRTSPAFSGTSSPTNSLVGKAMPVNFRDVIAKSISVKFQEGQSPGSITGILLPSAVLHAPAKQTIDFCIRNCFVRPPSETNRTRTFSGQPAPAGQSLIAEPNPYKRGRYTPPQPAQSGQSPAQPQPQQAPPAAGAQSKAAASQAQDKQQSKPSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKETTAPGASIRTSVAPTPDKKPMLKPQKPFAPNAGAAGLPGPNGLKMPAFMDGMAHLPFGHPFNFWGPTPFMPSPFIPGAPNVPGILPEQYFASQRMRGLQEQRSAIVQQQQQQQQQQQQQQQQHRDGTASEQPGTSNSRSGALIKSPREMAESLYDGTASNGSFLDNLIRSSLESGMPRERAIAGQAAAQPPSQQADNLAGAGAGGKALIEQLCRSSRRAQQDSSEDEAAPGYKRPQPERPERVPTVELSPSPSDRARTTDEGSERGLTSPPTPMSLSRLSGSGRDDETTRDSRSSREREVQNGGGSEKADERPESNNSSGCGSSSASSNGNSSSKKLNHYPELQNLYTVSTDKKSACDSKLIVDHSSQKTQGLQHKDYVAEAGLVAQLQRGLGNNGSNGSSGSNGSNGSNGSNGSGSSSPTNQPSAASQEPRSPQQQRPTTMEESVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714287;
- 90% Identity
- iTF_01380517;
- 80% Identity
- -