Stex000884.1
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- ARID5B
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000001.1:12564850-12589101[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-24 1.8e-20 73.9 0.0 2 89 321 406 320 406 0.95
Sequence Information
- Coding Sequence
- atgTTGCAGTTGTTAGGCGGTGCCTGCTTCAGTCACGGTCCCTACACGTTCTACAAAGCAGTGCGAATCGGCAACAATCGCATACTGCGACTGGGCAGCTTCTTCCTGACGAAGCTCTGGAGCGATGCCGATCTCGTCAGCATCGGCGAGCTCCAGCTGCTCTGGATCGACAGTCGGGGCCCCAACACACCTCTGGCCTCGCTAAGGCTCTACTTCCTGCCGGAGAACACGCCGGACGGTCGCAGGGACACACATGGAGAGGACGAAGTACTGACGATCTCGGAGAAGGTAGTGGTGCGAGTGCACGACCTGGTGACATGGCTGTCGCCGTCGCTGGAGTGGTCATGGGGTCGGGAGGTGTCGTACCCGCCGACGCCGTCCTCGTCGCCGGAGAGCAGTCCGCAGCCGCAGGTGCTGTCGGACCCGGGGCTGGACTTCTCGGACGTCGAGCGCCACCAGAAGGACCTGGACGCCCTGTCGACCCGCCGGGGCGAGCAGGTCAGCCAGACGAAGGTCGTCGTCCTCTCGTACCCGAGGTACTGCCGCTACAGAGCTCTGCTCCGTCGCCTCGAGGGTTCCGAGCCATCCTGGCTCTGCTCGTCCATCGCCGCCGCCCTCGGCGGCTTCACTGCCCTGCCCGGGACTCGCGTGCTCTTCTGCAGGGACACCTTCGACTACCCCGACCTCGAGACACACGAGCTGCTCTGCAATCATTTAGcgCCGAAGTTAAAGGGTAGGCCTCGGAGGAAGCGCAAAAAGCGCAGCGTGTCGCCGGGCGAGTCGAGCAACGAGAGCGAGGCCTCGGTCGCCTCGTCGGCGGCAGCCTCCACGTCGAAGGGCTCGAGCTCCGGCCAGTCGAGCGCCGGTTCCGCCGCCTCCAGCACCTCCTCGTCGTCGGCTGctgcggccgccgccgccgccgccgccgttaaACGCACCGACCGCAAGCCCAGCGCCGAGGAGAAGAAATTCGTCAGCGAAGTGCACACCTTCATGTCCTCGCGCCAAACTCCCCTCGGCAAAATGCCCCTACTGGGATACAGACAGATCGACCTATTCCTGTTTTACACGAAAGTTCAGGATTTGGGCGGATACGACAGAGTAAGCGCGAATCGCCTTTGGAAGACTATTTACGATGAGTTGGGTGGAAACACAGGCTCGACGAGTGCTGCAACGATAACGAGAAGACACTATGAAAGGTTACTGCTACCATACGAGAGATGTCAGAAGGGTGAGGAATCGAAAGTTAAGCCAAACCAAGCTGGCAGACGTACCAAGACACCCAGTATATCGGAAGCGTCGGAGGATGGCATAGAAGTGAAGAGGGAGACCGAAAGTCCCCCGCCTTCGGAGACGTCATCTCCTACCGAGACGTCAAACTCCACAGCAGCTACACCCCCTCCTCTTCAGTCAATTCTTTCTACTTCGCCATTCCTGCCGGGTGAAAAgtcgcgcgcggagagcgGCAAGACCTCGTCCCTGCGCAGCGTCAGGGTGAAGCCCGAGCGCTTGAAGTCACTGAACACGATAATCGCGACCAGCAACCCACCGCCTGCCAGCCAGCAACAACTGCCCACCTCGCCGAGCCTCCTGCTGACGACGGCGCCcacaacgacgacgacgacgacaacCACACCGCCAGCCTCCACCACGCCGACGAATAGCAGCGTGCTCGAGAGGCAGCTCAATAGTCCTCTAGTTACGCAACAGgtACCGCCATCGTGTTCACCACCGGGACTGCCCGTGAGCACAGTAGCAACGAATGCCACGACAGTAGTGACGTTGACCCCGCCACCGGAGAAGGACATGAAGGAGATAAAACTGGACCCGAAGCAGACGAGTCTGCTGGCCCagggaaaagaaaacataCCGCTCTTCGAGGAGAAGAGCCCGATTTTCGCGGACAAGCCGCCGATGGTCGCTCCACGTTCGCCTGAGGTCATCGATCTCGAAACCGAGTCCGAACCCGGCACTCGGGACAAGCTCATCATTCCTAGCTTCAAGAAGCggaaacttgaaattttaagagaaGGTGGTTTAGAAGTTACGGCCGTTGAATTGGACTCGCGACCAAGCGTCATCCAGCCAACGGCGACGACAGCTGGTGTACCGATGTCCGTATGTACGACGACAACGTCCTCGTCTTCTGCGTCGGCCTCGCCGTCACCGCTGGCGACGGGTACGAACGGGGCCTCAACGTCGCCGATCAAGCCCGAGGAGAAACCACCAGCGTCGCCGTTCTCCCTACCGATACCGAAGCTCATCAGCGTCACAGTGACCCCGGAGCTCGGTCGCACGGAGGAGGGTCGCAGCCCGCGCCTGTCCCCGTCGCCCATCAAGCAGCAGCCGCAGCTGGCGCCGACGAGTCAGAACAGCAACGGCACGCCGACGAGCCAGGCATCGCCGGTCAACAGCCGCGTGATAAACCTCGGCAACTCCTCCAACAACGCGACGCTGCTGCAGCTCTACGCCAACGCCAATATGCCCATGCCGCACTCGCTCAGTCCCGTGGCGCAGGCGAATCACCGATTCGTTCCGCCGATACCCGCCCCGGTGACAAACGGCCGGCTCTTACCGAAGGTCACCCAGTCCAGGTCGATCTTTGGTAATAGCGAGAGAACGGTCTACGGTAACCCCAAGGATATAATCGCGCCTAAGTTCTTGCCGCCGGTACTGCCTCACCCACATGCTCCTAGGACTCCGAGttCTTTACCGCCTCCGCCAGCAGGCATGTCGCCACGCTGTGATCCAGTAGCTACTGGTGTTCTTGATCTCACACAAAAGTCGTCACCGGCGCCTGAGCGACCTGGTATGGCCCGACCGAATCTTGAGATTGTGAGGGTACCAGTGGTGCCCAGACCGACGCCCTTGAACCTCGAGGTACGCAACCACGACAGGCGCGGAGTCATTGGTACCGTCGGCAGTCACAACAGGGATATGAACAGTATAAAGCCGCAGCAGTCGATGGCGGCGCCCCAGCCGCCCTCGGACTCGACGCGGAAGAACCAATTCGTTACTGGCAGCGTCGCACCGAATCCGGCCGGCTATCCAGGCATGATCGACAGTCGTACAATGGCCACGAATAATCTCGAAATCACCCTCGTCAGTCCGAAGAAGTCTTCTGTCGGCTCTGTCGGCTTGCCCCAGCCCAGCCCGCCTATGCGCCAGAATAACAATGtgATGCCATCTCAATTACCTATGCAAAGGAGGCCGCAACATCCGCAACAACCGCATCCACCTCAGCACCACTTGAACGGCAAGTACCCGACGAGAATGCCCGCGGAACCTGTGTCCCCGTACACTCCGAGGAAACCGTCGGGCCCAAGCGGCGGAAACAGTAGTAGTAGCATCCATCATCCGGTTATACCGAACGTACCGAACTTGAGCCACCTGAacgcgagcgccgcggcgaaCTACGGCAAATCCAGCCACCCGAGCTACCAACAGCTGGCGATGGAGAGGAGAAAAACACCGATCGATGCTATTGCCAGCAGAGAGCAACATCGCAGGATAAGCGAAGGCGACAAGGTCGCTctgcaacagcaacagcagcagcaacagcacaGACTGGAAGCTGCGTCGAAACCACAACAGTCgagGGAATCCGAGGCGTCGAGAAGGCACAGTGTGCCGAGTCTGCCCACGGGCTTTATGCCGGCAATGCCACCGAGCAATCAAGCCTTCCTGGCGCACCAGCTCGCTGCGGCGAATAACGGCACGTCGCCAGCCGCTGCGGCGGCCGCAGCGGCCGCGGCTGCCGGCAAGTTCCTGCCAATCCTGGATCCGTACTACTCGGCCTTCTACAACGGCCTCTTCCCCGGGCCCATGGCGCCGAACGCGGCCCCAGCGCCCTTCCTGCCCCCGGAACTCAGCGCTTACTACAAGGAGCTGCTCGCCTCATCCTCCGCTCAGCAGACGAGACTCGCCATGCAGCACCAGCCCGCCGCACCCACGTCTAAGTAG
- Protein Sequence
- MLQLLGGACFSHGPYTFYKAVRIGNNRILRLGSFFLTKLWSDADLVSIGELQLLWIDSRGPNTPLASLRLYFLPENTPDGRRDTHGEDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSYPPTPSSSPESSPQPQVLSDPGLDFSDVERHQKDLDALSTRRGEQVSQTKVVVLSYPRYCRYRALLRRLEGSEPSWLCSSIAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSAAASTSKGSSSGQSSAGSAASSTSSSSAAAAAAAAAAVKRTDRKPSAEEKKFVSEVHTFMSSRQTPLGKMPLLGYRQIDLFLFYTKVQDLGGYDRVSANRLWKTIYDELGGNTGSTSAATITRRHYERLLLPYERCQKGEESKVKPNQAGRRTKTPSISEASEDGIEVKRETESPPPSETSSPTETSNSTAATPPPLQSILSTSPFLPGEKSRAESGKTSSLRSVRVKPERLKSLNTIIATSNPPPASQQQLPTSPSLLLTTAPTTTTTTTTTPPASTTPTNSSVLERQLNSPLVTQQVPPSCSPPGLPVSTVATNATTVVTLTPPPEKDMKEIKLDPKQTSLLAQGKENIPLFEEKSPIFADKPPMVAPRSPEVIDLETESEPGTRDKLIIPSFKKRKLEILREGGLEVTAVELDSRPSVIQPTATTAGVPMSVCTTTTSSSSASASPSPLATGTNGASTSPIKPEEKPPASPFSLPIPKLISVTVTPELGRTEEGRSPRLSPSPIKQQPQLAPTSQNSNGTPTSQASPVNSRVINLGNSSNNATLLQLYANANMPMPHSLSPVAQANHRFVPPIPAPVTNGRLLPKVTQSRSIFGNSERTVYGNPKDIIAPKFLPPVLPHPHAPRTPSSLPPPPAGMSPRCDPVATGVLDLTQKSSPAPERPGMARPNLEIVRVPVVPRPTPLNLEVRNHDRRGVIGTVGSHNRDMNSIKPQQSMAAPQPPSDSTRKNQFVTGSVAPNPAGYPGMIDSRTMATNNLEITLVSPKKSSVGSVGLPQPSPPMRQNNNVMPSQLPMQRRPQHPQQPHPPQHHLNGKYPTRMPAEPVSPYTPRKPSGPSGGNSSSSIHHPVIPNVPNLSHLNASAAANYGKSSHPSYQQLAMERRKTPIDAIASREQHRRISEGDKVALQQQQQQQQHRLEAASKPQQSRESEASRRHSVPSLPTGFMPAMPPSNQAFLAHQLAAANNGTSPAAAAAAAAAAAGKFLPILDPYYSAFYNGLFPGPMAPNAAPAPFLPPELSAYYKELLASSSAQQTRLAMQHQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01380399;
- 90% Identity
- iTF_00712637;
- 80% Identity
- -