Sque001399.1
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- nfxl1
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000002.1:662373-665105[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.86 1.3e+04 -2.9 1.1 15 19 123 127 122 127 0.81 2 16 0.36 5.5e+03 -1.7 0.4 4 10 158 164 157 164 0.84 3 16 9.5e-09 0.00014 22.5 16.7 1 19 172 189 172 189 0.99 4 16 2.5e-08 0.00038 21.1 16.0 3 19 227 243 215 243 0.91 5 16 0.26 4e+03 -1.3 0.3 5 10 267 272 267 274 0.92 6 16 0.0096 1.5e+02 3.3 9.8 1 19 278 297 278 297 0.88 7 16 5.1e-05 0.78 10.6 8.5 1 18 333 350 333 351 0.97 8 16 0.00044 6.7 7.6 6.1 1 12 353 363 353 363 0.95 9 16 0.69 1.1e+04 -2.6 5.8 14 18 394 398 394 399 0.89 10 16 1.3 2e+04 -3.5 0.6 9 12 416 419 416 419 0.77 11 16 2.7e-05 0.42 11.4 7.1 1 12 435 446 429 446 0.91 12 16 0.63 9.7e+03 -2.5 1.7 6 10 461 465 460 465 0.88 13 16 0.0014 22 5.9 15.9 4 19 475 490 473 490 0.91 14 16 1.4 2.2e+04 -3.6 1.7 9 13 496 500 494 500 0.73 15 16 2.5e-06 0.037 14.8 10.4 1 18 535 554 535 555 0.88 16 16 1.3 2e+04 -3.5 0.7 6 10 585 589 584 589 0.87
Sequence Information
- Coding Sequence
- ATGAGGAAATTTCGAAGAGCTCAAGCCGAAAATCAAGCTTCTattgtaaaacatttaaaagcaAATGTTGTAGAATCTTCTAGTAGtgatgaagaaaatgaagaagtaTTTGAATCAGCAgtggaaaaagttttatctaaTTATCAATGCGAGGGTGgagatataaataaagtagtaTCATATTTGACAGAAACTTTTCAGTCTGGTGGTGCACTATGtcttatatgtatatcatCTGTAAAGAAGACAGATCCAatttgGAGTTGCTCTGaatgttatacatttttacatttacctTGTATTCAACATTGGGTAAAGGATAGTTTAAGTTACAAACATGAAAAGGGAATTACTCCTCTGTGGGCCTGtcCGAAATGCAGAACAGAATATAAGGAGAATCAGCGACCAAGaaaatatctttgtttttgtGGAAAAACAGAAGATCCTCCTTATCAGCCATGGTCCATATCTCATTCCTGTGGAAATatgtgtgaaaaatttttacaaccaAAATGTGGCCACAAGTGTATGCTTCTGTGTCACCCTGGACCTTGTCCTCCTTGTCCAAAAATGGTTTCAGTCCCTTGTTTCTGTGGAAAACAAGCACCTCAACCTAGAAGGTGCAATGCTAAAGAATGGAGTTGTGGTGAAATGTGTGACAAAAAATACACAAGCTGCAATCATAaatgtattgaaaaatgtcattCGGGTCCTTGTCCACCCTGttcagaaaaaattctgtCAGCTTGCAACTGTGAGAATAAATCGGAACTACGTAAATGCAATGAATCTGTTTGGAAATGTGATAAAGTATGTGGGCGACCTTTCTCCTGCAATGTCCATGTTTGTACTGAAGTTTGTCATAAGCCAAGTGATTGTAATGCATGTCCATTGGAACGCAACCGAACATGCCCATgtggtaaaaagaaatatgctATATCGTGCAAGCAACAACAAGTACCAACATGTGGAGATACATgtggaaaattattagattgcGGAGCTCATTATTGCAATATGAGATGTCATACAGATCGTTGTGGACAATGTCTTGaatgtgGTCATTCTTGTCCGGCGCTTTGTCACACTAAAGTATGGACAAAAGTCAACCCAAATGGAGTAACCAAACCCATAGGACCATGGGAaaaccaaaaagaaaaatgggaaTACAAAACTTTTCCATGTCCTCCTTGTGAAGTTTCTGTCTTTGTTACCTGTCTTGGAGGACATGAAACAAGTCCGTGGCCTTGTCACAAGGCTATTTCAAGTTCTTGCCTTAAAGAATGTGGTCAATTATTATCTTGTACAAATCATACTTGTGAAAGACTTTGTCACAAATTACAATCATCCAGCGGTAATGATGAAGATAAATGCATGGAATGTGAGAAaccttgtattttttcaagaCCAAAAGGATGTACACATATTTGTCCAAAGCCTTGTCATCCTGCACCATGCGATCCATGTAAGAATCTTGTAAAAGTTCCATGCCATTGTGGTATTAACACACTTTACATCCGTTGTGCTGAACTTACCTCTGCTAACATTAAAAAAcgcaatgaaatatttcaatgtgGAAATCAGTGTCCACGAAACtatCCTTGTGGACACAGATGTATTGATAACTGCCATCCTGGATCATGTCAAAATGCAAAAACTTGCAACAAAAAGGTCAAGATATTTTGTAAGTGTAAACGAATAAAGAAAGACTTTTCATGTATTTTAGTACGTTCTGAAAAAGCAGTTGTTGAATGTGATGAAATctgtcaaaaaaagaaagaagagttATATCGTCTTCGAGAAATTGAGCaagagaaaaaacgaaaagaggAAGAACTTAAAAATCAGAAAGAAATTGAGatgtttgaaaagaaatttaaaccAAAACGAAGAGGAAAGGATCGTCACTACAGCATAGAAGAGTCACGCGATAAAGGCAATTCCTGTAAATGGATATGGATCATTGCAGTACTGATTGCTGGCATTTCTGTTGCAATAATGCTGACATTCCATACCAATGGTGAAACATTAAGCattggataa
- Protein Sequence
- MRKFRRAQAENQASIVKHLKANVVESSSSDEENEEVFESAVEKVLSNYQCEGGDINKVVSYLTETFQSGGALCLICISSVKKTDPIWSCSECYTFLHLPCIQHWVKDSLSYKHEKGITPLWACPKCRTEYKENQRPRKYLCFCGKTEDPPYQPWSISHSCGNMCEKFLQPKCGHKCMLLCHPGPCPPCPKMVSVPCFCGKQAPQPRRCNAKEWSCGEMCDKKYTSCNHKCIEKCHSGPCPPCSEKILSACNCENKSELRKCNESVWKCDKVCGRPFSCNVHVCTEVCHKPSDCNACPLERNRTCPCGKKKYAISCKQQQVPTCGDTCGKLLDCGAHYCNMRCHTDRCGQCLECGHSCPALCHTKVWTKVNPNGVTKPIGPWENQKEKWEYKTFPCPPCEVSVFVTCLGGHETSPWPCHKAISSSCLKECGQLLSCTNHTCERLCHKLQSSSGNDEDKCMECEKPCIFSRPKGCTHICPKPCHPAPCDPCKNLVKVPCHCGINTLYIRCAELTSANIKKRNEIFQCGNQCPRNYPCGHRCIDNCHPGSCQNAKTCNKKVKIFCKCKRIKKDFSCILVRSEKAVVECDEICQKKKEELYRLREIEQEKKRKEEELKNQKEIEMFEKKFKPKRRGKDRHYSIEESRDKGNSCKWIWIIAVLIAGISVAIMLTFHTNGETLSIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -