Sque007398.2
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- pnr
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000049.1:12753882-12770461[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.045 1.4e+02 2.9 1.4 1 27 270 296 270 300 0.78 2 2 1.2e-17 3.6e-14 52.8 7.1 1 35 335 368 335 369 0.97
Sequence Information
- Coding Sequence
- ATGAAACCAGCTATTATACAATCAAAAGCGACCAATATAAAAGAGACTGAAAAACAACAGAGCACTTGGTACGAGACTCCGGGACCAGATCGGGTGGAAATAGAACGAGCGGTGACGTACGTGACCTACGCAAACGAGGAGGATCTGAGGCGCGAGGTGATGGAGCACCATCGCCAGTCGGTGCAGCAGCGCTTCAGCCCTCATCAGGGCGGTTCGCCGAATGGCGAGACCCTGACCGAGAGTCAGACGCTGGTCACCACTCAGAATTATCCACCTCATCAAATCACGTATACATCCCTCGAGACCGTACCCCTACCCTCCACTCAGACTGTCTCCTACACACAATTCATACCCACCACAGAGTTCCAGCAGTTGCCAGCTGGCTACGGCTATTCCAAGCACCAGGAGATCCTCGTCTGTCCACCGCCTAGTCAACCGTGTAGAAGTGGCGAGTACGAGCATGCGACGAACATGCTCCTGAAGAGCGACCCCACGTTGACCTCGTCATCGCTGATTCGACCGGGCGCCCTGTCGTACGAACAGCCGCAGTCGCCCTCGCAGATGGGCATATACACGAGCGGCTCGGTGACGTACCAGATCGCCAAGCCCAGCGAGTACTACAGCCAGTCGCCGCCCTTCGACTACGGGCCGAATTACGCGAGTGTACCGATCACGGGGGCCGACGCCGGCAGCATGATATTCACGGCCAGCAATCCGTACATGGCCAGCGGCTCGAGCTCCTCGGGCTGGATGATGCCCAGCCCCGACGAGGCGTACGAGGCGCAGCTGCCCGGCCCGGCCAAGGAGTGCATGCACTGCGGCGCCAGCGACCCCACGGGCGGGCGCAAGGACCCCGCCAGCGGACACTATCACTGCACCGCCTGCGGCAACCTCTACATGTATCCCAAGCCCAACGGCATGACCAGGCCGCCGGTGCAACGCGTCAAGCCTAAGGCCACTGCACCACCGGTGAGTACTGGAGGAAGGAGAATAGGCGTGAGGTGTGCCAATTGTTCAACGAACACAACTACCCTGTGGCGACGAAATAACAATGGAGAACCTGTATGCAATGCCTGCGGACTCTATTATAAACTTCACCAGGTGAATCGACCGATGAGCATGAAAAAGGACAGTATCCAACAGAGGAAAAGGAAGCCGAAAAATCACGCGAATGTTAACAACAACAATCACGGAGTGTCGAATGCGATTCACAAACCAGAAATCAAAGCCAGCTTACTCGTGGAATCGAAGGTGCAGTTGAGCATGTACGCTAACGAAGGCGGGGACGGTGGGTCCGAAGAGCATTACGTACCCGTCAGTAGCGCCTTTATACCGACCGCACAGATACCGCTGGCACTGCCGTCTTACGGTGCCTCCCACTCACCCTTACCTTTACCTACCGCCGCCGATTTGAATCGCCAAACTACTCTTACcGTGCCACCGCTAGAACCGGTTACTAGCCGGCCGAATGCGGACCTGACATCGGTGATAACGTCGACGGCAGCTGCCCAAACGAGCGAGAGATCGTAA
- Protein Sequence
- MKPAIIQSKATNIKETEKQQSTWYETPGPDRVEIERAVTYVTYANEEDLRREVMEHHRQSVQQRFSPHQGGSPNGETLTESQTLVTTQNYPPHQITYTSLETVPLPSTQTVSYTQFIPTTEFQQLPAGYGYSKHQEILVCPPPSQPCRSGEYEHATNMLLKSDPTLTSSSLIRPGALSYEQPQSPSQMGIYTSGSVTYQIAKPSEYYSQSPPFDYGPNYASVPITGADAGSMIFTASNPYMASGSSSSGWMMPSPDEAYEAQLPGPAKECMHCGASDPTGGRKDPASGHYHCTACGNLYMYPKPNGMTRPPVQRVKPKATAPPVSTGGRRIGVRCANCSTNTTTLWRRNNNGEPVCNACGLYYKLHQVNRPMSMKKDSIQQRKRKPKNHANVNNNNHGVSNAIHKPEIKASLLVESKVQLSMYANEGGDGGSEEHYVPVSSAFIPTAQIPLALPSYGASHSPLPLPTAADLNRQTTLTVPPLEPVTSRPNADLTSVITSTAAAQTSERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -