Sque003885.1
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- ZFX
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000022.1:7805385-7810200[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.2 2.4e+02 3.2 0.1 3 23 27 47 26 47 0.94 2 15 3.8 4.3e+02 2.4 3.2 1 19 1022 1040 1022 1045 0.75 3 15 0.00051 0.057 14.6 2.3 3 23 1131 1152 1129 1152 0.96 4 15 0.00027 0.031 15.5 0.3 2 23 1165 1186 1165 1186 0.98 5 15 2.3e-05 0.0026 18.8 2.3 2 23 1189 1210 1188 1210 0.97 6 15 0.0082 0.92 10.8 0.7 1 23 1216 1238 1216 1238 0.96 7 15 3.2e-05 0.0037 18.4 4.5 2 23 1245 1266 1244 1267 0.95 8 15 0.14 16 6.9 3.7 5 23 1280 1298 1279 1298 0.97 9 15 2.9e-05 0.0033 18.5 1.5 3 23 1305 1326 1304 1326 0.97 10 15 0.013 1.5 10.2 0.3 2 23 1342 1362 1341 1362 0.97 11 15 8.8e-05 0.0099 17.0 0.7 1 20 1368 1387 1368 1390 0.92 12 15 0.00011 0.012 16.7 2.7 1 23 1398 1420 1398 1420 0.99 13 15 0.003 0.35 12.2 3.2 1 23 1426 1448 1426 1448 0.97 14 15 5.5e-06 0.00063 20.8 3.9 1 23 1454 1476 1454 1476 0.99 15 15 0.00056 0.064 14.5 7.0 1 23 1482 1504 1482 1505 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGCTCAACAGTGAGTGCAATGTCAGCTGGCATAGCCAGCAGcagtggtggtggtggtggagcAGTCGCTTGCCCAGTCTGCACACTGTACCTGCGTGAAGGTATTAGTCTACAGAAGCACTTGGATACTCATCCAAAGGAGCAAGTGATCGAGGCGCTCATCCGGGCGAGCAGCGGTGGCGGTGCTTCGGCTTTGTTTGGCCAAAGCTGTGCCTCTCAACAGCCACAGCCGCAAACACAGACATCGATACCAACGCCAACACCGACTCCGACGCCGACAGCGACGCCCACCGCAACACCTGTACCTGCACTACCGATGCCAACGTCGAGTCCGGGTTCCAGTGTACAGCCAACAACTTCGCCGAGTCCGCATGTTCCTCACGCACAGTCGCCTTATCCAATTGGCCCTATTTTCGAATGCCCGCCGATCAACGCCATGATACCACCACCGCAGTTCACTTCTTTTAGCTACCAgcaatttgttaataatggAACAATGATGATACCAGCTCAATATGCAATGGCTCAGGCCCAGCCACCTCAAACAAGTCAAATGATGCAGATGTTGTATAGTCCATATGGAATGTACCATCAGCAGCAAATTCCAACGGTACAAATGATTTCTGCGCCAACAATGATGCCTACGACGGCAACAACTCTACCAACGACGGTACCTGCTGTTACGGCGCGCATGAGACCAGCTACGAATACAAGCAATGTTACGCTCACGGCAGTTAACGAAACGACGACGACAACATCGCCTTCAAGAACGACCAGCTGTACACAATCCCAACCACAGTTGCAGGCTTcacaacagcaacaacagtCACAGCCACAACAAATGGTCATTGAATCGCCTAAGCATCAGATAGTCCAGGAAATAATTCCTGATCGCATACTGCCCGATTTGGAGATGCCTGCATCGCCTGAACCGACACCGGTTGAGAATGAACACAACCATACGTTGATTGAACATGGAGAGCAAGTAACTCAAAGTAGTTGCGCACAAGAAGAAAAGCGGCATGTCGAACATTATCACagGGAGGATTCAGTAACGTTAGTCACCGATAGTTGTGAAGAAAATGTTGACGACAAAAGCGAATCAATCTTACCAGATATTGAAGACAATGAAGAAATTGAATCGCTTATAGTGAGGCACACTGATAGGGTAGTTAATGACAAGCATGCTGAAGTGCAAATCGAGACTGATGAACATATGGATACTTCAGATCACGAACAAATTACGAATAAGACAGACGTTGAAAGTGTTCAAAGTAATGAAGTGAAAGGTGGTAAGGAAGTCAGTAAAACAACGGATAGGAAAGAAGTCGTCATTGAAAGTGTGCAAGAACAGGATGAATCATTAGTTAGCGAAGTTGCAGTTACCAGTAATGATAAAGTTGAAGTTGAACAATTAGGTCGATTACTCGTAAATGTGGAATCTGACTTTAATAATGTAGAAATATCTAACAAAATCGAAGAACAGAAAACAGAGCAAACTCGAGAAAATATTCACGTAATCTCGATGGAAGAAACTAATGAGAAACCTTCGGAAGAAGATGAAAGCACAAGTATTTCATATCATAAAGCAAGTCTTGAACAGCTCGAGTGCAAAATTATTGTCGCACACGAAGACACTGACGTGTCATCTGTTGCTTCTGAGGATTCCGTTCAGTGtgacataaaaattcaaaaagtccTTTCGTCCCCTTATCAGTACAAGTATTCGCATTCAGCTCCTACCTCACCTGcttcaaagaaaaaacagtatCGCTCTCTATCTCGCGCGTCCATACGTTCCGACTTTGACCGTTCGAATGAAAATATCTCTGCTTACCCAGTAGGATTTGAAGCTACTACATTAGTGGATTACCTCAAGGACAATTACAATGACGAAGATATGGAACTTGAAGAACCACATCACACATACTTAAAAGAAAGTAGCAACATGATTACGGAAGATGTAGCAACCCATCCACCCATGTTGACGGGTGCTAGAGGTGTTTCCATTCTAAAGGCCCGTCGTAGTAAAGTACCTGGCTCACCTATATCCGTTCGATCTACCTCATCTTACGGTCATATGgaagaagaagacgaagaGGAGGATGAAGATTCAGATGCCGATAGTTGTGTAAGCTGTCACTCTAACGATAAAGATGATgaggaagaagaggaagaagaggaaCACATTATACTTGCCTCTTCGACACAGCAAATGATTGACGAAGATGatcgtgaagaaaaaaaattactttcacaCATCGAGATCAGTAAAATCGAGATAGGTCCGGAAACAATTCAAGAGCAACATCATCAACAAGAACAGCCTGCAGATTTTCGATCTCAGAGTTTAATGGCTGATCATTATTCGACCGCTTCATTCCCGTTGGAGCATCATCAGTCGAGTATAcatcagcagcaacaacaatcTGCTACGATGATCAGTCACGAAACTTATCCAATGTCAAGTAATGAAGCTTCACAGAATCTAATGAACATATCTGATTGTGTAGATCCGACGACTAGTACAGATTCCAAAAGTTACTCTAGTTCAAGCAAGTCGGTAATTCAGAAACCTTCGACAGAACTACTAAATATAAGTGAAGATGCTCACGCGGGTCCTATGAACGTTTTTGAATTTGATGGACTACAGATACTCGTGCCAAGCACTTTTATTAGTGAATCTTCCCAAAAAGCTGTAAGTGGAACGAGTCAGCAGTCAATGGCGAGTAGCGAAAATGGAGCAGGAAACGACGAAGAAGTTAAGAGCGTAAATATGAGAGCTGACGAAACCATGCCAGCTAGAGGTGAATTGTCGGAACAGGAAAGTAATGGTTGCACTGAGCAATCTGCTTGGCAGctgTACATGGGACAAGAATCTTCGCGTATGTCCACTTCGTATGATCTAATGGCACGGGAAAGTTGGGAAGAATCTGAGGGGTCAGACCACGATGATAACAACGGCGGCCCTTTGCTGGACAGCCGATCGCTCGCTACACACTTCAATTCCAGTTTGTTCCTCGATCATGATCGCAAAACACCCACTCGTCGCGTATTTAAATGCTCGCACTGCTCGGAGGTGTTCGATTGTCCAAAAGAGCGGCGGGTACACAGTACGATGGTGCACAAAGAAGCCGGTCCGTCGAGCTGCAGTAACGATAACATGCACCATCACTCAGAACTGAAGGATATCAAACTATTGGAAGGTCGGGGGAACGTTTTCGAAGAGATTTTTGTTCCAGGAGGTATGCACATGCAGCAAGCTTATCAACATCAACAGCAACCATTGCTTCATCAGCTGCAACCGCCTCAGCATTCAAGCGCAATGAAAGCCGACGGCGATGTAAAAGTTGTTCCGTTACTTCCTATCAGCGAAGTCATTTGTACTCTTTGCAATCAGCGATTCAGCAGTGAAAAATCCTTACAGATTCACCATAGACGTATGCATGTGGCTGAACCAGCAAAACGAATTCGCGAAAATGCTAAGTGTCAAATCTGTAACGAAGAATTCACTTCCGTagccaattttaatattcacctTAAGATTCATCCTCTCGAGTGTGGTCAATGTGGTAAATACTTTTATCGAAAGCAAAATTTCAAGCTCCATATGAAGCGTCACCTGGGAATCAAGCCTTTCCGTTGTAATGTTTGCGATAAAGCGTTTCTCACAAAACAGAAATTGGATGAACACACAAACGGTCACACAGGTAACGCCCCTGTAAAATGCAATCTATGCAATGAGACATTCAGGCGATATTCGAATCTCACTCAACATAAGAACCGCCACCATCTAAACATCAAGAAGAAGCTTAAGGACTATATATGTCATTGTGGCGAAGTGTTCCACACGAAAAAGAAGCTCGCTTGGCACAAAGAGACTCACGACGAAAAGCCAAAAGCGTGCACCTACTGCAACGAACGCTTTATTCACATGGCCAGCTTAACGAGACATATGCGAAGAGCCCACAATCGACGTTTTGTTCCGGATGCCCAGAGGGAGAACGAGAACGTTGAATGTCCGATCTGCAAGTGCATTTATTTGAGATCTTCACTGGCAGTGCATATGCGCGTGCATAATGGTGAAAGGCCTTATGAGTGTCAGGTTTGTTCCAAAGCTTTCAGTACAAAGTGGAACTTGCAGCTCCATAAATGGACCCACGCCGCACGCAGTACGAAGCCCTTCAAATGTAATCAGTGTAGCGCCGCATTTTACAGACATAGCGATTACACAGCTCATATGAATTCTCACAGAAACGTTAGGCCGTACACATGCAACTATTGTGGAGCGCAGTTCATTAGAAAGTATAACTGCCTACGACATGTCAAGGAACACGAGGAAAATAAAGCATATACGTGTGATGTGTGCAACAAGACCTTCCACAGGTCATACTACTTAAAAGAGCACTTGAGAGTGCATTCAGGAGCGAGACCTTACTCTTGTCACATTTGCGGCAAATCCAGTAGCACAAAGTCGAACCATAATAAACACGTCAGAATTCACCATGCACGTGAACCTGTAAATACGGAGAATTAA
- Protein Sequence
- MDLSSTVSAMSAGIASSSGGGGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGGGASALFGQSCASQQPQPQTQTSIPTPTPTPTPTATPTATPVPALPMPTSSPGSSVQPTTSPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFTSFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYSPYGMYHQQQIPTVQMISAPTMMPTTATTLPTTVPAVTARMRPATNTSNVTLTAVNETTTTTSPSRTTSCTQSQPQLQASQQQQQSQPQQMVIESPKHQIVQEIIPDRILPDLEMPASPEPTPVENEHNHTLIEHGEQVTQSSCAQEEKRHVEHYHREDSVTLVTDSCEENVDDKSESILPDIEDNEEIESLIVRHTDRVVNDKHAEVQIETDEHMDTSDHEQITNKTDVESVQSNEVKGGKEVSKTTDRKEVVIESVQEQDESLVSEVAVTSNDKVEVEQLGRLLVNVESDFNNVEISNKIEEQKTEQTRENIHVISMEETNEKPSEEDESTSISYHKASLEQLECKIIVAHEDTDVSSVASEDSVQCDIKIQKVLSSPYQYKYSHSAPTSPASKKKQYRSLSRASIRSDFDRSNENISAYPVGFEATTLVDYLKDNYNDEDMELEEPHHTYLKESSNMITEDVATHPPMLTGARGVSILKARRSKVPGSPISVRSTSSYGHMEEEDEEEDEDSDADSCVSCHSNDKDDEEEEEEEEHIILASSTQQMIDEDDREEKKLLSHIEISKIEIGPETIQEQHHQQEQPADFRSQSLMADHYSTASFPLEHHQSSIHQQQQQSATMISHETYPMSSNEASQNLMNISDCVDPTTSTDSKSYSSSSKSVIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMASSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHDDNNGGPLLDSRSLATHFNSSLFLDHDRKTPTRRVFKCSHCSEVFDCPKERRVHSTMVHKEAGPSSCSNDNMHHHSELKDIKLLEGRGNVFEEIFVPGGMHMQQAYQHQQQPLLHQLQPPQHSSAMKADGDVKVVPLLPISEVICTLCNQRFSSEKSLQIHHRRMHVAEPAKRIRENAKCQICNEEFTSVANFNIHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFRCNVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01381536;
- 90% Identity
- iTF_01381536;
- 80% Identity
- -