Sque006285.1
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- osa
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000046.1:10074-13711[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.4 1.7e+03 0.2 0.0 6 37 3 35 2 37 0.62 2 2 5.6e-16 2.4e-12 47.8 0.0 2 57 43 98 42 122 0.83
Sequence Information
- Coding Sequence
- atgaaattacaaaaattgtcCGATTTCTGCAGGAAGgTGTACAGTAGTCATGTGCCTCAAGATCCTTACAGATCTAAGaaatcagATAGTTTATCAAAATTGTATGAAATGGATGACTCAGTGGAACGTAGATCCTGGTTGGACAAACTAGTAGGATTCATGGAAGACAGAAGGACACCGATAACAAGTTGCCCAACCATCTCCAAGAACCCCCTCGACTTATTTCGATTATATCTATACGTCAAGGAAAGGGGGGGCTTCATGGAGGTATGCAAGAATGGACTCATCAATAAGGCTCTACCCGTCTTACTTCAGACGCTACCTGCCGCCACCAAGATGACAACGGTGGACTTTATGTATTCGGAACGCATGGGCAAGGAATACGGCGATCCATCTAGTGGTAATGGAGTGAACTCCACCAACCAGTGCGCATCGTTCGACCGACCCAAGCGCAATTGTTAA
- Protein Sequence
- MKLQKLSDFCRKVYSSHVPQDPYRSKKSDSLSKLYEMDDSVERRSWLDKLVGFMEDRRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKNGLINKALPVLLQTLPAATKMTTVDFMYSERMGKEYGDPSSGNGVNSTNQCASFDRPKRNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01381117;
- 90% Identity
- iTF_01381117;
- 80% Identity
- iTF_01381117;