Sque001027.1
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- Copb2
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000001.1:14295507-14316367[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7 3.1e+04 -4.2 0.1 49 60 725 736 718 742 0.77 2 3 0.54 2.4e+03 -0.2 0.0 21 60 901 941 870 957 0.73 3 3 1e-22 4.5e-19 69.4 0.0 6 89 1558 1639 1554 1639 0.94
Sequence Information
- Coding Sequence
- ATGGTGCGTACCATCCGCGGGATCGCTTGCCCTGGGAAGCCACTCCGCAACATCGGCGGCCGCGGCAGCGATTCGTCAGCGCTGCCGCCACCGCCTCGTGAGATGTCAACATTCCTCCGCTACCTTCTGCTCCAAATTTTGACTAGAACCACCTGTTTGACACCCACGGCTCGGTTTTCCGCTAACTTGTTTTGGAAATTGccGCTGAGACTGGATATCAAGCGCAAGCTGACAGCTAGGTCGGACAGGGTGAAATGCGTTGACTTGCATCCTACCGAGCCATGGATGCTGTGCTCCTTATACCAGGGGAATGTGAATATCTTCAATCATGATACGCAGACACTTCTAAAGACATTTGAGGTGTGTGATCTGCCGGTGAGGTCAGCCAAATTCGTTCCAAGGAAGAATTGGGTTGTTACGGGATCGGATGACATgcaaattagaatttttaattataacactTTGGAACGTGTCCACTCTTTTGAAGCCCATAGTGATTATGTGAGATGTATTGCTGTTCATCCTACACAGCCGTTTATACTTACAAGCAGTGatGATATGCTGATAAAACTATGGAACTGGGAAAAGTCGTGGCTATGTCAACAAGTGTTTGAGGGTCACTCTCACTATGTTATGCAGATAGTATTCAACCCAAAAGACAACAATACATTTGCCAGTGCATCCCTTGATCGAACTCTCAAGGTCTGGCAACTTGGTTCTTCCACAGCAAATTTCACCCTTGAAGGACATGAGAAAGGCGTTAACTGTGTTGATTACTATCATGGTGGTGACAAGCCCTACCTCATATCTGGTGCAGATGATCGCTACGTTAAAATATGGGACTACCAAAACAAAACGTGTGTCCAAACACTGGAAGGGCACAAACAAAATATCTCTGCCGTTTGTTTCCATCCTGAACTGCCTATCATTTTAACAGGCTCTGAAGATGGTACAGTTCGAATTTGGCACGCAGGTACATACAGACTCGAAACTCCATTAAATTATGGATTCGAACGAGTATGGGCAATCGCGTCTCTGAAGGGCTCGAACAATGTAGCCATTGGTTATGATGAAGGCAGTGTCATGGTGAAAGTCGGTCGTGAGGAACCTGCAGTTTCAATGGATTCTTTaggTGGTAAAATTGTTTGGGCTAAACACAGCGAGATTCAACAAGTAAATCTCAAAGCCCTTGGTGAAGAAGCTCAAGATGGAGAAAAGCTACCGCTTGTTGTAAAAGATATGGGAGCTTGTGAAATTTATCCTCAAACTATTCAGCACAATCCAAATGGAAGGTTCTTGGTAGTCTGTGGTGATGGCGAGTACATTATTTACACTTCAATGGCATTAAGAAACAAAGCCTTTGGGCAGGCTTTCGAATTCGTTTGGGCTGCAGATTCCAGTCAATATGCAGTGAGAGAAAGTTCTACAACCgtcaaagtatttaaaaatttcaaagaaaagaaaagctttaAGCCAGATTTTGGTGCTGATAGTATTTTTGGTGGCTACCTGTTGGGTATATATTCCAGTTCTGGACTTTCGTTCTACGATTGGGATACGTTAAAACTTGTCCGACGTATCGATATTCAGCCCACTCACGTTTATTGGGCAGAAAATGCATCGCTCGTTGCAATCGCCACAGCCGATCAGTactttattcttaaatatcaAGCCGATGCCGTCCAAGCAGCTGCAGAAAATGCTGAAGACATTGAAGAGGCCTTCGAgatGATTGCAGAAATGAACGAAATAGTTAAAACTGGACTGTGGGTTGGTGACTGCTTCATTTATACAAACAGCGTAAATAGAGTGAACTACTTCGTAGGAGAAGAAGTAGTGACGGTATCACATTTAGACAGACCAATGTACTTGCTGGGATATGTACCGAGAGATAACAGGTTATACCTGTGCGACAAAGAATTATCAGTGGTTTCATATTCACTGTTACTTTCTGTTTTGGAGTACCAAACAGCGGTAATGCGAAAAGACTTCGATACTGCGAATAAAGTGCTACCAACAGTTCCTAAAGAACATCGCACGAGAGTTGCGCATTTCTTGGAGAATCAGggCTTTAAAAAGCAAGCTCTCGCGGTTTCAACAGATCCCGAGCACAGATTTGAGTTGGCCTTGGCGCTGGAAGATCTCGACACGGCGCACGAATTAGCCAAAGAGGCTAACAGTCAACAAAAGTGGCGTCAACTTGCAGCGCTTGCCACGCAGCAAGGAAAACTTGATTTGGTTCAAGAATGCCTGCACAAAGCCGAGGACTTTGCTGGCCTTCTACTTCTTGCCACGAGTACAGGAAATGCAAATCTGGTGGATAAATTAGCATCGGCATCCGATGAGTCGGGAAAGAATAACATATCGTTCCTGTCCTACTTCCTTCTCGGTGATATTGATAAGTGCCTGGAGATTTTGGTGAAAACCGACAGGATACCCGAAGCTGCATTTTTTGCTAGAACATACGCACCCAGTAAAATCTCTGGAATCGTAAAGCTTTGGAAGGATAAATTGACGGCTGTTAGTGAAAAAGCCGGACAGAGTCTTGCCGATCCAGAACAGTATGAAAATCTTTTCCCAGGATATAGGGAGTCTCTGGAAGTTGAAACTTTTATGAGAGAACAATACAAAACGCGAATTCCCGCCTCCGAATATTCTAATCTTATGAAGGGCGACAGGAATAAACAGGCGGGTAAACGTTCGAAGGTATCGACGACATCCGGCGCGCCGCTGAACATCTTCGACATGCCGCGGGCGCTGACGAGCCACGGGCGCAAGGAGCGAGTGAACATGTCGGCGGAGCAGATCGAGAAGTGGCTGAACGAGAGCTCCCTGGCCAAGGAGGAGAGCAAAGTCGAGATGGAGAGCGTCTCGGGCTTCAAGTACGACGCGGAGAAGCAGGAGAGGCCGACCAGCCACATCTCCATATCGCCCAAGATCCAGCACCTGGTGCGCCCGGTGAACGTCACCCTGTCGAAGCTCTCGGACCGGCTGAAGAAGGCCAACTCGGCGATGGCCAGCCACAGGATGCCGACGGTTTTTCTCGCCAGCGGCCAGGTGACGCCGGTGAGGCCGCAGCCCGTCGCCGCCGACAAGACCGTCGTCGGCAAGCCCGCAGTGGAGCGCAAGGAGACGCCCTGCCCGTCGCCGGGCGCCAAGCAGAGCAAAGAACCGACTGTCGGAGATGATCCTGGCGACAGCGATGCAGTCTCCAAGTCCGATGCGAATTCCGTGGGCGACTCGTCGGAGAAGAAGTCGTTGAGCAGTCCCGAGAAGAAGGTTTTTTTTCATCAGCGGAAGCCCTTTCTGCCGAAGGTAAAGGAGCGCAAACCCGTAAGCAGCACCTCGGCATTCTCACCCGAAAACGAGAGCAGCGTTTATGCGTTCGAGAGCGAAGCCGAAGTGCCGGTGAGCACGCCATTTCGCAGAAAGGCAAAAGATGCTACTGCCAATGCCAAGGAACATCTCGCTAAAGAAAAGGAGAAGTCAAAAGCGAGTGGCAGtaaagcagataaaaatgaagctAAGGGCAAGAGTGGCGAGGATGCAACGGAAGCTACCGAGCCTTTAAACTCGCCAGAGGAAGCTCAGAAGGACGAAGAAAAATCGCCTCCGCTGTTAGAAAAAACAACTCCAAAAAACTTCGAGCTTCCGAAAAACTTCGCAGATTTAACAAACATACAGGTGTTACCACTAGACAAGCTAACAACAAGCTGGAGCAATGTAAATTGTAGCGCTTCCATAGCCGTGCAGGTTAACCTGGACGATcaaaagcagcagcagcagcaacagcatcagcagcagcagcagcagctgaaTAAGCCATCGACAACAGCGGAGAGCAACAGCGAGTCTAGCGGTGCGCAGAAGAGTACCGAGATTTCGACCCAAACGGACACTAACACGGATAATGACGACGACGACAGCGGCCAGCTGTTTTACATACCTCTACAAGCAGTGACTCGCAACGCCTCGGCTCAGGGAGGCCAGCAGCTCATCCAGGGAGTAGCCGTCAAGCTCGGTACCGAAGGACCCACGGGTCCAAATCAAAGAGTCCTGCTGAAGGCCAAGCTGGTTACAAAGCCGCCGATATCGGTTGCTCGATGTCCGCCCATCGGTACCGTTCAACCTACTGCCAGAGCACCACAAATTGCGAGCACCGATCAAACGGACGCTCCGTCCACCTCTACGGTTGGAGCAGGGGACGCGAACTTCAAATGTCCGACGACTGAGGAGAAGCCTGTTAAAAGTTCCACTAGTAACAAACAAATTcaCAAGACGCCCAGTCCTGACAAGATTATAAAGTCGCCAAAAGGTAGAGAACGGAAAATGTCGTCCGACGGGCCAAAAAGTGGGAAGAAGAATCAGAAAGCGATTAAAGCGGGAGCGTATGCGCCggtaaataaaacaactttTCCAAAGTCTAAGGAGGCAAGCGAGGAAGCTCGGCTCGTAGAAGCTCCAACGTTTCGCCCGTCAGAAAAGGACTTTCAGGATCCGTTGGAATACATCGATAAAATACGGCCAATCGCGGAAAAGTTCGGCATTTGCAAAGTAGTTCCTCCGTCGAATTTCAAACCTGAATGCAAAGTATCCGATGATATGCGATTTACGGCTTACAATCATTACGTTCATCGAATGCTTCACCGATGGGGCCCGAACGTAAAAGAAATGAtggctataaaaaaatatttagctaCTCAAAGTATAACGTTAACTCAACCACCATGGATTGGTGGAATGGAAGTTGACCTCCCACATTTGTATCAAACCGTACAAAATTTAGGTGGGTTGAAAGAagttattgaaaagaaaaagtggcaAAAAGTAGCGGACGGCATGAAAATACCAAGGTCGGCACAAGACCGAGTCACCAAATTGGACGacatttattgcaaatatttactcCCTTACGACACTTTATCCCAAGACGAAAgggataaattatttaaagaagtaGAGATAGATTGGACTAAACGAGAAAAGAGAGATCGCCAAGAAATACAATCCAACGATAATGATGACGATGAAGAAGAAGATGCTACTGAAGAAATAGAAGAGTGCATAGTAAAAGGACGGAACATGCCGCTGAATGCCTTTTATAGGATCGCGCGTAATACGCAGCGAATGTGGTTCGGCGAAAATCAAGGTGCTCCGAGTGAAATGGAGGGTGCTTCAGCTGACGACGTTGAAACCGCATTCTGGAAACACGTCGTTGAGAAGAAACGCCACGTGTGTGTTCATGCGGCAAGCATTGATTCCAGCGGGCGAGGCTTCGGATTTTCTGTGGCAAAGAATAGTCCCTTTGGCCGACATCCTTGGAATCTCAAGATTCTTACGAACAACGCCGGCTCCGTATTAAGAGCTCTTGGTCCTCAAATGGGTGTAACCGTGCCGACACTTCACGTGGGAATGCTGTTCAGCGCGTGCTGCTGGTACCGCGATCCGCATGGTTTACCGTGGATAGAGTACCTGCACACGGGCGCTAAGAAGATCTGGTACGGCATACCGGACCAGCAGAACAGTGCATTTCGCAAAGCTCTGACGAAAATGTTTCCGCGTTACTGCAAGAACAAGACGATCTGGCTACCGTCGGACACTGCCATGGTGCCGCCCGAGATGCTCGTCAGCAATAACGTGCCACTTTGCCAGACTGTTCAGGAACCCGGCCAGTTTATCATCGTTTTCCCCAAGGCCTTCACCTCGAGCATCTGCACTGGTTACGTCGTCTCCGAGAGCGTTTACTTTGCTCAGCCCTCGTGGCTTGAAACCGCAGAGCAAGTGTTCCAAgaTTTACGTAATAGTTGCGAGccttcaatattttcatttgaaagaCTGTTATTTAGCATAATCAATGACTCTAGATCTCATATTGATGTACTTAAACAGATTTTACCTACTGTTATTAAAGTTTGTGATAGAGAAATAGAAAAccgcaaaaaattaaaagaattggGTCTtacgaattttgaaaaattaccacTGCCAGAAAATGATAAGAAAGGTAAaggtaaaaaagttaaagaggATGAAGGTGATTACGAATGTGATACGTGTCgagcaaatttatttgtttctctCGTGAGTAATCCCACAGACGAAAGCATTTTCTGTCTAATCCATGCCATACAATACatagagaaaaagaagcaagTTCTAAAAAATTGCACGCTTATGTACACATATAGTGagaATGAATTGAACGACCTCATTCATAAATTGAAAGATAGGATCGAAGCCAAATCTAAAAAGACTAATCAAACGAAGCAAGCTAAATAG
- Protein Sequence
- MVRTIRGIACPGKPLRNIGGRGSDSSALPPPPREMSTFLRYLLLQILTRTTCLTPTARFSANLFWKLPLRLDIKRKLTARSDRVKCVDLHPTEPWMLCSLYQGNVNIFNHDTQTLLKTFEVCDLPVRSAKFVPRKNWVVTGSDDMQIRIFNYNTLERVHSFEAHSDYVRCIAVHPTQPFILTSSDDMLIKLWNWEKSWLCQQVFEGHSHYVMQIVFNPKDNNTFASASLDRTLKVWQLGSSTANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRYVKIWDYQNKTCVQTLEGHKQNISAVCFHPELPIILTGSEDGTVRIWHAGTYRLETPLNYGFERVWAIASLKGSNNVAIGYDEGSVMVKVGREEPAVSMDSLGGKIVWAKHSEIQQVNLKALGEEAQDGEKLPLVVKDMGACEIYPQTIQHNPNGRFLVVCGDGEYIIYTSMALRNKAFGQAFEFVWAADSSQYAVRESSTTVKVFKNFKEKKSFKPDFGADSIFGGYLLGIYSSSGLSFYDWDTLKLVRRIDIQPTHVYWAENASLVAIATADQYFILKYQADAVQAAAENAEDIEEAFEMIAEMNEIVKTGLWVGDCFIYTNSVNRVNYFVGEEVVTVSHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFDTANKVLPTVPKEHRTRVAHFLENQGFKKQALAVSTDPEHRFELALALEDLDTAHELAKEANSQQKWRQLAALATQQGKLDLVQECLHKAEDFAGLLLLATSTGNANLVDKLASASDESGKNNISFLSYFLLGDIDKCLEILVKTDRIPEAAFFARTYAPSKISGIVKLWKDKLTAVSEKAGQSLADPEQYENLFPGYRESLEVETFMREQYKTRIPASEYSNLMKGDRNKQAGKRSKVSTTSGAPLNIFDMPRALTSHGRKERVNMSAEQIEKWLNESSLAKEESKVEMESVSGFKYDAEKQERPTSHISISPKIQHLVRPVNVTLSKLSDRLKKANSAMASHRMPTVFLASGQVTPVRPQPVAADKTVVGKPAVERKETPCPSPGAKQSKEPTVGDDPGDSDAVSKSDANSVGDSSEKKSLSSPEKKVFFHQRKPFLPKVKERKPVSSTSAFSPENESSVYAFESEAEVPVSTPFRRKAKDATANAKEHLAKEKEKSKASGSKADKNEAKGKSGEDATEATEPLNSPEEAQKDEEKSPPLLEKTTPKNFELPKNFADLTNIQVLPLDKLTTSWSNVNCSASIAVQVNLDDQKQQQQQQHQQQQQQLNKPSTTAESNSESSGAQKSTEISTQTDTNTDNDDDDSGQLFYIPLQAVTRNASAQGGQQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPPISVARCPPIGTVQPTARAPQIASTDQTDAPSTSTVGAGDANFKCPTTEEKPVKSSTSNKQIHKTPSPDKIIKSPKGRERKMSSDGPKSGKKNQKAIKAGAYAPVNKTTFPKSKEASEEARLVEAPTFRPSEKDFQDPLEYIDKIRPIAEKFGICKVVPPSNFKPECKVSDDMRFTAYNHYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQDERDKLFKEVEIDWTKREKRDRQEIQSNDNDDDEEEDATEEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQGAPSEMEGASADDVETAFWKHVVEKKRHVCVHAASIDSSGRGFGFSVAKNSPFGRHPWNLKILTNNAGSVLRALGPQMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDQQNSAFRKALTKMFPRYCKNKTIWLPSDTAMVPPEMLVSNNVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFQDLRNSCEPSIFSFERLLFSIINDSRSHIDVLKQILPTVIKVCDREIENRKKLKELGLTNFEKLPLPENDKKGKGKKVKEDEGDYECDTCRANLFVSLVSNPTDESIFCLIHAIQYIEKKKQVLKNCTLMYTYSENELNDLIHKLKDRIEAKSKKTNQTKQAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -