Sagr001521.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- pnr
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000004.1:3503250-3510876[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-18 2.2e-14 53.1 2.6 1 34 168 200 168 202 0.96 2 2 6.9e-19 2.7e-15 56.0 5.2 1 35 227 260 227 261 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGTGGGAGCGGCGGCTACGGCGCGACTTCCGACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCCTGTCTATGTACCCTCGTCCAGGCCGGCGCTACCCTCGTCGACGACGGCGGCCCAGTACCACTCCTTCCCCGGCTCCGCCTCGCCGGCCTGGGAGAAGACGGCATCGTGGCAGCATGGCGTGGACACGTACGCGCACCACGCCCTGGCCAGTCACACGGGCAGCTCGACCGGGGCCATGGGCCCGCACGGGGCCCACGCCCACCCCCACGCGGGCCACCCCCACACGGCCCACCCCCACACGAGCCTCGCCGCCGCGGCCGCCTCGCCGTTCTACGCCCAGAACGTGGCGATGATGTCCTCCTGGCGCGCCTACGACAGCGCGAGCTTCCAGAGGGCCTCACCCTACGACACAGCAATGGACTTTCAGTTTAGTGAAGGCCGGGAATGCGTAAATTGTGGCGCTATATCAACTCCGTTGTGGCGACGCGATGGCACTGGTCATTATCTATGCAATGCATGCGGCCTCTATCACAAAATCAATGGGATGAATCGCCCCCTCATCAAACCTACAAAACGACTAATCTCCGAATTCCAGACGGCGACGAGGCGGCACGGCCTATGCTGCGCCAACTGCGGGACGCGCACGACGACCCTCTGGAGGCGCAACAACGAGGGCGAGGCCGTCTGCAACGCCTGCGGCCTCTACTTCAAGCTCCACGGGGTGAACCGGCCCCTGGCCATGCGGAAGGACGGCATCCAGACCCGCAAGCGCAAGCCCAAGAAGGCCGTCGAGCCGAACGCGCGCCAATCCTCGACCGAGCACGAGAGCAACGCCTCCACCGCCCCGTCGCCCTCCAACGGTATTTACACAGACCTTGCAGTTTCCTTTGTTAATTCATGGCTAGCCGTGGGTACCATTCGGCCCGTCTACCTGGGGCACACGTCCCTGCTGCCGTCGAGCGGCGGGGCCGGGTCCAGCGGCAGCCTCCCGCCGACGGTGAAGACGGAGCCGCGGAGCTGCGAGGCGCCCGGGGTCCTCGGGCAGCCCTACTCGGCCTACTACCAGCACCCCCACCAGCTGGGCGCGCCCGCGAGCGAGCACCAGCAGGGTAACTACTACGCGGCCCAGGAGGCGCCCTACCACCACCAGCACCACGTCACCGCGGCCGCCAAGCTCCTGGCCTCCTCCTAG
- Protein Sequence
- MFHGSGSGGYGATSDYXXXXXXXXXXXXXXXXXXXXXAPVYVPSSRPALPSSTTAAQYHSFPGSASPAWEKTASWQHGVDTYAHHALASHTGSSTGAMGPHGAHAHPHAGHPHTAHPHTSLAAAAASPFYAQNVAMMSSWRAYDSASFQRASPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRHGLCCANCGTRTTTLWRRNNEGEAVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKAVEPNARQSSTEHESNASTAPSPSNGIYTDLAVSFVNSWLAVGTIRPVYLGHTSLLPSSGGAGSSGSLPPTVKTEPRSCEAPGVLGQPYSAYYQHPHQLGAPASEHQQGNYYAAQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -