Sagr015762.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- grn
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000011.1:4008606-4027727[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 6.3e-16 58.1 4.7 1 35 327 360 327 361 0.98 2 2 5.7e-18 2.2e-14 53.1 5.6 1 35 384 417 384 418 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAATCGAGCGCGGCGCGCTGGTACGAGCCGCCGAGGAGCCTCGAGCCGGCCTCGGGCGCCGGCGCCGGCTCCAACAACCCCGGCGTCGTCGGCAACCCCGGGGACTACCGGGGCTACTACTCGCACGCGGCGCCGAGCCACCACCCGGCGGCGGCGGCCCACTACGCCCACAGCAGGATGTCGAGCAGCGGAATGCCGGGCGGGCCCATCTCCCAGGTCTGCCGGCCGCACTTTGCCCCGTCGCTCCACCCCTGGGGCTTCCCCACGGCCTCGGCCTCGAGCAACGGCGCCGCGGAGGAGAAGCCCCAGAGCCCGCTGGGCTCGAGCATGGCCGGCCCGGGCAGCGGGGCAGGCGGCCTCGGGGCCCACGGGGCAGGACACCCCTTCCCCTTCCCGCCGACGCCCCCGAAGGACGCGACGCCCGACAGCATCACGGCCAGCACGACCTCGAGCACGACGAACAACGCGGGCGGGGCCTCGGGCCAGCCCGGGGCCAACAGCGGCTCCGGGGGCTCGGGGGCCGGCCTCGGGCTCCCCGGCTCGGGGGCCGCCGGCAGCGAGTACCAGGCCGCGGTGGCCCACGCGGCCGTCATGGGCGCCTTCATGCACCACCAGGACGCCCTGGGCGCCTCGGCGGCCTCCTGCGACGTCAAGCCCTCGTACGACCCGACCGCGAGCGCCTACAACATGTACCAGCACCTCCAGTATCCCAGCCACCACTCCCACAACCACCCCCACAACGGGCCCGCCTCCCTCTTCTCCTCGGCGGCGAACCACCACGCGGCTGCGGCTGCGGCCGCGGCCGCCGCCGGTGCCGTCGTCCCCGGCCTTACCTCCGCCGACTCGAAACTGTTAGGCTCCCACGTCGGGCAGAACACGCCCAACTCGCCGGGCTCCCAACACCAACAGCAGCAGCAGCAAAAACCCAGGAACAAGTCCAGGACGTCCGCCGAGGGGCGCGAGTGCGTCAACTGCGGCGCGACCTCGACGCCGCTGTGGCGGCGGGACGGCACCGGGCACTACCTCTGCAACGCCTGCGGACTCTACTACAAGATGAACGGACAGAACCGACCGCTGATCAAGCCGAAGCGACGCCTGTCGCTGCAGAGCGCCGCGAGGCGGGCGGGCACGAGCTGCGCCAACTGCAAGACGGCGACGACGACGCTCTGGCGGCGGAACCAGGCGGGCGAGCCGGTCTGCAACGCCTGCGGCCTCTACTACAAGCTCCACAACGTTAACCGGCCGCTGACCATGAAGAAGGAGGGCATCCAGACGCGAAACAGGAAGCTCTCGTCGAAGAGCAAAAAGAAGAAGGCCGGCGGCTGCCTCGGCCTGGGCGGCGTCATGGGCGACATGATCAAGGCCACGGGTCCTCTCGAGCTCGACAACAAGCCCTTCCACTCGGGCTTCGGCTCCCCGATGGGCGACTACCGTACCTCGCAGCACCACCACACGATGCATCCGGCGATGCAGCACTACATGTACCACCCGGGCGTCGGGGTCGGGGTGACCGGGTCGCTCCACCAGGGCTTCGCGCCCCCGGCGCCGCCGCCGATCCACCCGCACTCGCACTCCCACTCGCACCACATGACGAGCCTCCAGGGCCTCCAGCTGGCGGCGACGACGAACGCCATGACGGGCTGGCGGTCCGAGTACACATGA
- Protein Sequence
- MDMSSESSAARWYEPPRSLEPASGAGAGSNNPGVVGNPGDYRGYYSHAAPSHHPAAAAHYAHSRMSSSGMPGGPISQVCRPHFAPSLHPWGFPTASASSNGAAEEKPQSPLGSSMAGPGSGAGGLGAHGAGHPFPFPPTPPKDATPDSITASTTSSTTNNAGGASGQPGANSGSGGSGAGLGLPGSGAAGSEYQAAVAHAAVMGAFMHHQDALGASAASCDVKPSYDPTASAYNMYQHLQYPSHHSHNHPHNGPASLFSSAANHHAAAAAAAAAAGAVVPGLTSADSKLLGSHVGQNTPNSPGSQHQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKATGPLELDNKPFHSGFGSPMGDYRTSQHHHTMHPAMQHYMYHPGVGVGVTGSLHQGFAPPAPPPIHPHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -