Basic Information

Insect: Sycophaga agraensis
Gene Symbol: ZNF236_1
Assembly: GCA_018906755.1
Location: JACCIE010000019.1:2917441-2925397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0017 0.21 12.5 2.1 2 23 54 75 54 75 0.98

2 23 3.9e-06 0.0005 20.8 1.3 1 23 96 118 96 118 0.99

3 23 0.00015 0.02 15.7 2.1 1 20 124 143 124 146 0.96

4 23 4.3e-05 0.0055 17.5 1.7 1 23 152 175 152 175 0.96

5 23 0.00014 0.018 15.9 2.9 1 23 184 207 184 207 0.98

6 23 3.3e-08 4.3e-06 27.3 1.0 1 23 342 364 342 364 0.99

7 23 6.6e-07 8.4e-05 23.2 2.4 1 23 370 392 370 392 0.99

8 23 0.018 2.3 9.2 0.3 2 23 399 420 398 420 0.96

9 23 0.0083 1.1 10.3 0.8 2 23 425 446 424 446 0.97

10 23 8.1e-05 0.01 16.6 5.4 1 23 506 528 506 528 0.98

11 23 2.6e-05 0.0034 18.1 2.5 1 23 534 556 534 556 0.99

12 23 2.1e-05 0.0027 18.4 4.4 1 23 562 584 562 584 0.99

13 23 5e-05 0.0064 17.3 5.0 1 23 590 612 590 612 0.98

14 23 0.018 2.3 9.2 1.4 2 23 888 909 887 909 0.97

15 23 0.00026 0.034 15.0 3.8 1 23 915 937 915 937 0.98

16 23 0.0016 0.2 12.5 2.7 1 23 943 965 943 965 0.97

17 23 2.7e-07 3.5e-05 24.4 1.5 3 23 1000 1020 999 1020 0.98

18 23 5.7e-05 0.0073 17.1 1.8 1 23 1026 1048 1026 1048 0.99

19 23 7.8 1e+03 0.9 0.1 2 13 1055 1066 1054 1067 0.88

20 23 0.00012 0.015 16.1 3.1 1 23 1071 1093 1071 1093 0.98

21 23 3.2e-05 0.0041 17.9 1.1 2 23 1305 1326 1305 1326 0.97

22 23 9.8e-06 0.0013 19.5 4.0 1 23 1332 1354 1332 1354 0.98

23 23 5.4e-07 6.9e-05 23.4 3.4 1 23 1360 1383 1360 1383 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0017	0.21	12.5	2.1	2	23	54	75	54	75	0.98
2	23	3.9e-06	0.0005	20.8	1.3	1	23	96	118	96	118	0.99
3	23	0.00015	0.02	15.7	2.1	1	20	124	143	124	146	0.96
4	23	4.3e-05	0.0055	17.5	1.7	1	23	152	175	152	175	0.96
5	23	0.00014	0.018	15.9	2.9	1	23	184	207	184	207	0.98
6	23	3.3e-08	4.3e-06	27.3	1.0	1	23	342	364	342	364	0.99
7	23	6.6e-07	8.4e-05	23.2	2.4	1	23	370	392	370	392	0.99
8	23	0.018	2.3	9.2	0.3	2	23	399	420	398	420	0.96
9	23	0.0083	1.1	10.3	0.8	2	23	425	446	424	446	0.97
10	23	8.1e-05	0.01	16.6	5.4	1	23	506	528	506	528	0.98
11	23	2.6e-05	0.0034	18.1	2.5	1	23	534	556	534	556	0.99
12	23	2.1e-05	0.0027	18.4	4.4	1	23	562	584	562	584	0.99
13	23	5e-05	0.0064	17.3	5.0	1	23	590	612	590	612	0.98
14	23	0.018	2.3	9.2	1.4	2	23	888	909	887	909	0.97
15	23	0.00026	0.034	15.0	3.8	1	23	915	937	915	937	0.98
16	23	0.0016	0.2	12.5	2.7	1	23	943	965	943	965	0.97
17	23	2.7e-07	3.5e-05	24.4	1.5	3	23	1000	1020	999	1020	0.98
18	23	5.7e-05	0.0073	17.1	1.8	1	23	1026	1048	1026	1048	0.99
19	23	7.8	1e+03	0.9	0.1	2	13	1055	1066	1054	1067	0.88
20	23	0.00012	0.015	16.1	3.1	1	23	1071	1093	1071	1093	0.98
21	23	3.2e-05	0.0041	17.9	1.1	2	23	1305	1326	1305	1326	0.97
22	23	9.8e-06	0.0013	19.5	4.0	1	23	1332	1354	1332	1354	0.98
23	23	5.4e-07	6.9e-05	23.4	3.4	1	23	1360	1383	1360	1383	0.98

Sequence Information

Coding Sequence: ATGAGGTCCTTCGCGGCCGAGTGCCTCGGCTTCGGCTTCCTGGCCCTCTGCACCAACGTCTTCTGCGTCGCCCTCGGCCTCGGCGCTCAAATCTACAAGGCCCAGTTGGACGCTCACATAAAGCTGCACAACGAGAAATGGTCGACGGACGACCACCGGAAGTGCAAGCTCTGCCGCAAGCAGTTCACCCAACCGCTTCTCTACCGCCAGCACTTGCGCGAGCACTACAAACTGCAGACGAAATGCTCAAAACAAACTAAGCGAGGCATCAGGCACAGGACTTCCTACAAATGCCGACTTTGTCTTAAAACCTTCGAAAAACCAAGTCAGCTGTCCCGACACATCAGAGTACATACCGGCGAAAAGCCTTACAAGTGTCACTTATGTAACCAAAGTTTCACGCAAAAGGGTTCAGTGAAGATTCACATGTGGCAGCACAATGGAGTTCGGCCGTATAGTTGTTCTTTATGCCATGCTAAATTCAGTCAAAAAGGTAATCTGAATACTCACGTTCTGCGAGTGCACAAAGCCCAGAAGGACACGTCGGTTTACCGGTGCTCGCGTTGCCCTTGTGTATTCAAGAGACTGGGCAGCCTCACCGGCCACATGAAGCGCACACATGTCGCGAGCACCGGCCGGGAGGAGTCGGATCCTGAGCCAAACAAGCTGGACGAGGTCGAGGAGCAGACCGCCGATGGACCGAGCGAGGAGATGCTGCAAGCCAACGTCGACGAAGTCATGCACGACCTGGCCGAGCTCGACTCCTGTGTCGAGAACTCGAACCTGGCTATGCGAGCTCAGGAGACCTATGACTCCGCTCTTGGCCCCGCGATAGGCGACTGTTCTGAGCAAGAGAAGACTACCGAGGAGGTCGAATGTGCCGTCAGCGAACCGTCCACGGGGAAAGACTCGACAGCGAATAGTCCGCAAACGACAGAAGTCATGCTCCATGATAAAATGGCGAACAATGAGAAAGGGAAGTACATTAAGATAAGACAACGATTTGTAAATAATAGTATATTATATGAATGCTCATTCTGTGATAAAACGTTTAAAAAACCTTCGGATCTTATGAGGCACATAAGGATTCACACGTGCGATAAACCGTTTAAATGTAAAATATGCGGTCGTTCGTTTACTTTAAAATCAACGCTACAGTCGCATGAGAAAACTCATAAAACTACAGTCAACTTAGAGTGCCGAAAATGTGACTTGGTCTTCGATTCTGATCGTGCACTTGACAAACACAACAGAGTTCATAATTCCACTAATAAATGTGCATTATGTGGCAAGAGGTTTGGGAGTTTTGAACGATTGAAGGAGCACTCAAAAGTACACATAGTGCGTAAAAAACAACAACACCAGAACAGAAAAAGTCTTTATGCGGCTGAAGTGCAAAATCTGGTACCTAAGGTAGTGCTCAAAGCACCACTAGTATTAAAAGAGATGAGCGATGGTTTGCTGCACGCTCAACCTGAGACAGAACAGCTTACAATGTCCGGCAATGGCAGACCCCATAAATGTTCGATCTGTCCATCAGCTTTTAATAGGCTAAGTCATCTCAAGCAACATTACCGAAAACACACTGGTGAACGACCATACACGTGTTCAATTTGTGACAGAAAATTCACATGCAATAGTGCTTTAAATACTCACATTAGAATTCACGATTGTTTGAGACCCTATAAGTGTCCAATTTGTAGTACACACTTTTCAACACTCAGTAGCATGAAAAGGCATCAATTTACACATAGTAATAAAAGACCCTATATGTGTCCTTATTGCAATAAAACTTTCAAAACAACAGTTAATTGTAGAAAGCATATGAAAATTCATAAACAAGAAATTGCCTTACAGCAACTAGAAATTCAAAAAATACAAACCCAGGCAAATTTAGATTCAAATCAAATAGAAACTGTAATAGTATCAGATCAATTTGCCTCTAATAATCAACAAATAACTGCGCCAGCAATTGTAACGCATTTGACTCAAGTTTTCTCTGATCCACTTTCAACCATAATGAAAGATAATGATAAATCAATAAGACAGAGTACATCTACCCTAGACACTCCAAATATATGTACAACTCAAACATTACATGCTGATGAGACAGGCACTATAACTTTGTCCAATTATACTGGTGATCAAACACTTACACCTGAGAGTATTAGAGAAATTGAAGAAACTTTAAATCAACAATTATTTACTTTTGGAATGAATATGGGTCTTGATAACACTGTTAGGAGAATTGAGGAACACAACAGTCCCTTGCAAACTCAAGATCAGCCTGTTTTAAGTATCATTTATGATAATGGTAAAAGTTTAAACTCACCTATTCGTACTTCAGTTAATACAAATATTTTATCATCTCGATTAGATGCATTTGGTATAAATCAAATTAGCTTGCAGGCTGATAATCAAGTTAATTCAGGAATTACACAAACTAATTCAATAAAAACAGATAGTATTCCAACTCAATTAATTGAAGAAAATCAAAGCAACGATTTTCAATTAATTACCAATAACATAGACACCAATAGAGAACTTCATCATAGTACTTTGGACTATAATAAAAAGAAAGATGATTTGTTTACAGTTATAATTAAAGAAGACTGCTTGGTAGAGTCTAATACAATGAATTTAAATAATGATAGTAATCTTGAATGTAATGTATGTCATAAGTCAGGGTTTGATGTAGACACTTTTAAAGAACATGTAAGAAAACATCAGAGTAATAGGGAATTTAAATGTACTCATTGCCTTTTGACATTTTGTACTAACGAAGATCTTACTGCACATGCAAAAATTCATGAAACTCAAGAAACACATAAATGTTACGAATGCAACCAAGAATTTACTACAACACTTCAATTAAGAGAACATATTAAAGATCATGTGAAACATGAATTAGAGCTTAAAAATTCAAATGGATTAGTTGATGTAATTAGTGATCTTGAATATAAAGATGAGAACGATATTTCTAGTAAAAAGAATAATTGTACATATTGTTCAAAGACTTTTCGTAAACCTAGTGATTTAGTAAGACATATTAGAACACATACTGGTGAACGACCATATCAGTGTGAATATTGTTCCAAAAGTTTTGCAGTAAAATGTACTTTAGATGCTCACTTAAAAGTCCATAGTGGAGAAAAGTCTATTTCCTGCAACGTTTGTAATAGTATGTTTGCCACGAAAGGCGTTAAACCGTTTAAATGTACAATTTGTGACATGCGGTTTCGAACTTCTGGTCATCGGAAAGTGCATCTTCTTTCTCATAGCCGGCTAGATTCAAAATCTACTCAAAATTCAAAGATAACACCAGAGGTTGCGGATCTAGCTGCGGAAGTTGCCAAATTAGAAAATCAAATAGTACAAATAGTTAATGTTGAACAAATACCTCAACCAATTCATACCGAGCAATTGAATAATCAGGAAATAAATGATAATCAAACTTTGAATACCGTTACAATGAATTCGATTCCTAATCACATTGCATTTAATTCAAATAATACTATATTAAATGATGAGACTGGATTTGTTACTTTGAATGAAAATAATGAATTGGTAGCCAATCTTGAATTCTTGTTAGCTAATGGTTTAGTTACAATACAAACTCAGGATTGTCAGGAAGGTGATGCAATTACCACTCATCTACCAACAGCAAATGTTTCATCAAATGAATACCTTACAACAAATAGCTTCCAAGAAATAAATGGACAATCATCAGGCCCAGAAGTAATATATACAACAGAAATATCTAATATAGCACCTATAGTTACAGATACAAATAATTTAGAATTGAACAATTGTGTAGTTTATGAGATGGAACACGAAGAATCGAAGCTATCCGAGAAAAACGAGGACAGTCAATTAAAACAAATAAAATCACCTAGCAATACCACGCGTCGAGAATGTGACATTTGCGGTAAAACGTTTGCAAAGCCGTGCCAAGTTGAACGGCATAAACGCATTCATACAGGTGAACGTCCTTTTCAGTGCGATTTATGCAGTAAGTCATTTGCTCAGAAATCTACTCTCCAAATGCACCAAAAACATCATACGGGTGATCGACCATATCAGTGTGCACACTGTGACCGTTCCTTTACTCAAAACGGCAACTTGCAAACTCATCTGAAACGAAAGCACGCATTAAACTTATTGTCAATTAAAAGAACATCCAAAGAACAACAGTTTGTTAACTATGATCCAAAATCTTTACAGCACAACGTCTTGGAATCAAAGCCGCTTTGCTTTGATGATATTTCTATAGTTGATCTTTTAAAATAA
Protein Sequence: MRSFAAECLGFGFLALCTNVFCVALGLGAQIYKAQLDAHIKLHNEKWSTDDHRKCKLCRKQFTQPLLYRQHLREHYKLQTKCSKQTKRGIRHRTSYKCRLCLKTFEKPSQLSRHIRVHTGEKPYKCHLCNQSFTQKGSVKIHMWQHNGVRPYSCSLCHAKFSQKGNLNTHVLRVHKAQKDTSVYRCSRCPCVFKRLGSLTGHMKRTHVASTGREESDPEPNKLDEVEEQTADGPSEEMLQANVDEVMHDLAELDSCVENSNLAMRAQETYDSALGPAIGDCSEQEKTTEEVECAVSEPSTGKDSTANSPQTTEVMLHDKMANNEKGKYIKIRQRFVNNSILYECSFCDKTFKKPSDLMRHIRIHTCDKPFKCKICGRSFTLKSTLQSHEKTHKTTVNLECRKCDLVFDSDRALDKHNRVHNSTNKCALCGKRFGSFERLKEHSKVHIVRKKQQHQNRKSLYAAEVQNLVPKVVLKAPLVLKEMSDGLLHAQPETEQLTMSGNGRPHKCSICPSAFNRLSHLKQHYRKHTGERPYTCSICDRKFTCNSALNTHIRIHDCLRPYKCPICSTHFSTLSSMKRHQFTHSNKRPYMCPYCNKTFKTTVNCRKHMKIHKQEIALQQLEIQKIQTQANLDSNQIETVIVSDQFASNNQQITAPAIVTHLTQVFSDPLSTIMKDNDKSIRQSTSTLDTPNICTTQTLHADETGTITLSNYTGDQTLTPESIREIEETLNQQLFTFGMNMGLDNTVRRIEEHNSPLQTQDQPVLSIIYDNGKSLNSPIRTSVNTNILSSRLDAFGINQISLQADNQVNSGITQTNSIKTDSIPTQLIEENQSNDFQLITNNIDTNRELHHSTLDYNKKKDDLFTVIIKEDCLVESNTMNLNNDSNLECNVCHKSGFDVDTFKEHVRKHQSNREFKCTHCLLTFCTNEDLTAHAKIHETQETHKCYECNQEFTTTLQLREHIKDHVKHELELKNSNGLVDVISDLEYKDENDISSKKNNCTYCSKTFRKPSDLVRHIRTHTGERPYQCEYCSKSFAVKCTLDAHLKVHSGEKSISCNVCNSMFATKGVKPFKCTICDMRFRTSGHRKVHLLSHSRLDSKSTQNSKITPEVADLAAEVAKLENQIVQIVNVEQIPQPIHTEQLNNQEINDNQTLNTVTMNSIPNHIAFNSNNTILNDETGFVTLNENNELVANLEFLLANGLVTIQTQDCQEGDAITTHLPTANVSSNEYLTTNSFQEINGQSSGPEVIYTTEISNIAPIVTDTNNLELNNCVVYEMEHEESKLSEKNEDSQLKQIKSPSNTTRRECDICGKTFAKPCQVERHKRIHTGERPFQCDLCSKSFAQKSTLQMHQKHHTGDRPYQCAHCDRSFTQNGNLQTHLKRKHALNLLSIKRTSKEQQFVNYDPKSLQHNVLESKPLCFDDISIVDLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -