Sagr020315.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000017.1:2660357-2665384[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-15 3.8e-12 46.5 0.2 3 44 598 639 596 641 0.95
Sequence Information
- Coding Sequence
- ATGCTGTCGCTCGGCCCGAAGAAGGACGGCGGACCGAATCTCAAGTTCTTTGACTCGTCGGAGGTGCTCGCCCAGCTCGACTCGGTCAAACAGTGGCTCCTGAAGAACGCCAAAAAGTATATACAGACAGATCCACCAACAAACAAAAGTTTATCTAGTTTAATCGTACAAATTCTTCAATTCCAAGAGGATAATTTTGGAAAAAATGTTACTAAACCACCTATGACAAGGATTCCAATGAAATGCTTTTTAGATTTTAAACCAGCAGGTGGACTTTGTCAGATTTTATTAACAGCTTTTAGGTTTAAACAAGAACAAGGATGGAGAAGATTCGATTTTCCAGTAGGAAAGTCTGGTACACGTATGGACAGAATGGTGGAGATGCTTGTTGCGATAGAAAGAGCATTGATACAGAGTAGATGTTTAACTGTTCCAAGTATATATGTAAGGTCAGATGTTGATAAAGCTACAGCAACTAAAGTTAAGGAACTAGTGCGTAGACACCAAGGGACAATTGCTGAAAGCGAAGATGATGCTACTCATATAATTTATCCTGTAGCTGATCCTTTAGAAGAAGAATATGCTCGACCCTGTTTTCGTCGTGAGCGATCGGTTTTATTGCATTGGTATTATTTTCCTGATAGTTACGACTCTTGGATAAATATTGATCTTCCATGGGATTTTCCTGAAACTGGACTTGGTAATTTTTCCGCAAAGACAACATATAAAGTATCAGCTACTTGGGCATTAGATTTAGAACAATATAATGAGTGGATGAATGAAGAAGATTACGAAGTTGATGAAGGTGGACAAAAGAAAGTTCATAAGTACAGATTATCAGTTGAAGATCTAATGGCTCAACCAGCCCCACCATCAGCTAAGAAGCAAAAAAGAAAACGATCGCCATCTCCTCCGCCTAAATTAGGGAAACGGAAAAGTGGTCGTGCTCCTGCTGGTATACAAGGATTATCAAATGCATCATCAGCAACACCAAAGAAATCTCGCGGTGGTGGAGATGATGAAGAAGATTTAACGCAAGGAATGGAGGACCCCCCTGCAGAACCAAGAATAGTAGAAGTTGTAGCTTCTAATGCCAATACTCCCAATTCAGGTCAAAACAACAGCTCTTCTGGGAACATTATCTCTGGCAGTAAAAAGCAAGACAATGAGTTACAACCACTTAAATCTGGAAATATGGCAGATCTTGATGAACCTGCAGAAGGTGACAAGAATAATTCACAAGCGTCTCAGGATAGGGAAGAAAGAGATACAAGTAAAGAAAGATGCGATGGCAGCAAAAGTGATGAACCAGAAGATAATGTCACAGAACAGACTCATCACATTGTAGTACCCAGTTACTCTGCATGGAATTTCATGATTGATACCTATAGACTTAATCCTACAGAATACATTACTTCTACTGCGTGCAGGCGCAACTTGGCTGGTGATGTTTGCGCGATAATGCGTGTACATGCTTTTCTGGAACAATGGGGTTTAGTAAACTACCAGGTTGATGCAGAGTCGAGGCCCACCCCTATGGGTCCACCACCTACATCTCATTTCCACGTATTGTCGGATACGCCTTCGGGTCTGGCCCCGGTCAATCCTAATCCGCCCAAAACACCTCAGCCTCCAGCAGCCAAAACTCTTTTGGACTTGGAAAAGAAGCCAATTCTCACGGATGAGAAAATATCTATGGCTGGTCCAATGGCCAATTTCGGACTGAAAATCGATCAGTATTCGAAAAAGCCTGCAGTGCTTAAGAATAAACAAGCAGCAGGGGCGACACGAGATTGGACGGAACAAGAAACGTTACTTTTACTCGAGGCACTAGAACTGCATAAAGATGATTGGAATAAGGTGTGTGAGCATGTGGGTTCTAGAACCCAGGATGAGTGTATTCTGCATTTCTTAAGACTGCCTATTGAGGATCCATATCTTGAAGAACCAGAGGGTTTAGGCCCATTAGCCTATCAACCCATTCCTTTCTCCAAAGCTGGAAATCCTGTTATGAGTACAGTAGCATTTTTAGCATCTGTTGTTGATCCAAGAGTGGCAGCGAGTGCAGCTAAAGCTGCAATGGAAGAATTTGCAGCAATCAAGGATCAAGTACCTGTTGCCCTTTTAGATCAGCATTTAAGAAATGTGCAAGCCAGTGCGAATTCAGATGGTCAATTTGATCCGTCCGCTGGACTCGCTCAATCAGGCATCGCGGGCACTGGGCCTCCCGAACCTCCAGAAGAATCAAGCACATCAAATTCCACAACTCAGCCTTCGTCGACATCAGCTACATCGCCGCAGTCAGCGTCAACCACTCCACCCGATGGTAAGAAGGACGAAACCTTCGAAAAGCCAAAGGAGAGCACTGCTGCAACACCAGAAACTAGTGATTCGCCAGGAAATAGTAACACTGCTCTGGCTGTCCCGAAAAAAGAAGTCGAAGGCACGGAGAGTGAAAGTACTGAACAACAGCCACCCGAAACTGAAAAGATGGAGGTGGACGCGAAAGAAAATGAAGAAGGAGAATCTAAGACAAAGGCTGTTGGCGAGGATAGCGAAGTTAAAGAGAAGAAAGATAAGGTTGTCAGGGATGCACAATTGCAATCGGCAGCGGCAGCCGCCCTAGCAGCAGCGGCTGTCAAAGCTAAACATTTAGCAGCCGTGGAAGAAAGGAAAATAAAGTCACTTGTTGCTCTGCTTGTGGAAACCCAGATGAAGAAACTTGAGATCAAACTGCGTCACTTTGAGGAACTGGAAACGACAATGGAGCGAGAGCCTCCACCGCAACCGACGCCACAGCAGCAAGGACAGCCTCCGAGTCCGCAGGCACAACCTCACACGTCGCCGCAACAAGTAGCATAA
- Protein Sequence
- MLSLGPKKDGGPNLKFFDSSEVLAQLDSVKQWLLKNAKKYIQTDPPTNKSLSSLIVQILQFQEDNFGKNVTKPPMTRIPMKCFLDFKPAGGLCQILLTAFRFKQEQGWRRFDFPVGKSGTRMDRMVEMLVAIERALIQSRCLTVPSIYVRSDVDKATATKVKELVRRHQGTIAESEDDATHIIYPVADPLEEEYARPCFRRERSVLLHWYYFPDSYDSWINIDLPWDFPETGLGNFSAKTTYKVSATWALDLEQYNEWMNEEDYEVDEGGQKKVHKYRLSVEDLMAQPAPPSAKKQKRKRSPSPPPKLGKRKSGRAPAGIQGLSNASSATPKKSRGGGDDEEDLTQGMEDPPAEPRIVEVVASNANTPNSGQNNSSSGNIISGSKKQDNELQPLKSGNMADLDEPAEGDKNNSQASQDREERDTSKERCDGSKSDEPEDNVTEQTHHIVVPSYSAWNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPPAAKTLLDLEKKPILTDEKISMAGPMANFGLKIDQYSKKPAVLKNKQAAGATRDWTEQETLLLLEALELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEPEGLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPVALLDQHLRNVQASANSDGQFDPSAGLAQSGIAGTGPPEPPEESSTSNSTTQPSSTSATSPQSASTTPPDGKKDETFEKPKESTAATPETSDSPGNSNTALAVPKKEVEGTESESTEQQPPETEKMEVDAKENEEGESKTKAVGEDSEVKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREPPPQPTPQQQGQPPSPQAQPHTSPQQVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969542; iTF_00968752;
- 90% Identity
- -
- 80% Identity
- -