Sagr001623.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000004.1:5021621-5026508[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-19 1.7e-15 56.8 0.0 1 43 360 403 360 405 0.95
Sequence Information
- Coding Sequence
- ATGTTGGGTAAGAAATGGTCAGACCGACGGTCAGATGCGGTACAAACATTTTGGCTCAAAAGCGGAGGCGGGCGCTTGGCCCTCGAGGCCTGGCGGCCAGCAGGCACGGAGGTCTATAAGAGTTTGTCTTTTCGGGCCGGGCGCCCGTGGCTGCGCGCTCCACAGGCGGACGATAAGGAGCTGTCGGGCGCGGAGGAGGAGAAGGAAGTGGAGAAGGCCCTGCTGAAGCCACTGCTCTCCCTCGAGGACCTCGTGCGGTTCTCGAGCCTCGAGGGCAGCGGCGGCGAGTCCCTGAGGCAGCTGCTGCAGCGCGGCCAGGAAGCCGGGGCCGCCGAGTGGTCGGCCTTCGAGCACGCCAACATCGGGCCCTACATCCAGAAGATGCTCGCCGCCGCCGCCCCCTTCAAAGGTATGGAGTCGCAGGATTACAGGATCCCGGAAGTGATGCGCCGGCTCATGTGCGAAGACAAGAAACTGAACAAGGACGGGAGCCTGAATGGTGACCAGGTACAACACCTTCACGGCTCGCTGCAACATCGACTGCCACAGTCGGGGCAGCGTGCGCCGATGACCAACGACGACTTCAACCCGGCGATCGAGGAGGAGGCGAGTGACAGCGGCCAGGGCCGGGCGATCCTCAAGATTCCGTCCTACAAGCCGGCGAGCAGCGGGGGTGGAGCCGCGGGGCCCGGGGGAGTGCCGAGCAAGAACGGCGCTGAGGCCTTCGCCCAGAGCTTCGCGGCGGCCGCAGCCGCGGCTGCGAATGCCCCGACCAACTCCCTCGTCGGCAAGGGGATGGCCGTCAACTTCCGCGATGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAGGGCCAGCCGGCCTCCGGGATGACAGGTCAGAACGCAGGCGGCCAGTCCCTCATCGCGGAGTCAAACCCCTACAAGCGGGGCCGCTACACGCCACCGGCGGGGGCCCAGCAGACCGGGGCTCAGCAGTCCAAGGCCGCGGCCCAGGCCCAGCAGGACAAGCAGCAGGGCAAGCCCGGCACGGGGGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTATGACCGGGACAGCCTCGTCGAGGCGGTGCGCGCCGTCCAGCGGGGCGAGATGAGCGTCCACAGGGCCGGCAGCTACTACGGCGTTCCACATTCCACACTCGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGATCAAAAGCAGCCGGAAGACAAGGTGAAGGAGACGACGGCCGCGACGGCGGCCCTGCGCACCAGCTCCGCGGCAGCCGCCGTCGAGAAGAAGCCCCTCCTCAAGCCCCAGAAGCCCTTCAGCCCGGCGGCCGGCGGGGCCGGGATGCCCGGACCGAACGGCCTGAAGATGCCCTTCATGGACGGGATGCCCCACCTGCCCTTCGCCCACCCCTTCAACTTCTGGGGCCCGACGCCCTTCATGCCCTCGCCCTTCATCCCCGGGGGGCCCAACGTCCCGGGTATCCTTCCGGAGCAGTACTTTGCCACGCAGCGCATGCGCGGCCTCCAGGAGCAGCAGCGCAACGCCATCGCCCAGCAGCAGCAGCGCGGTGAGCCGGGCGCCGCGGCCGGCGAGCAGCCAGGCACCTCGAACTCGCGGGGCGCGACGATCATGAAGTCGCCGCGCGAGCTGGCCGAGGGCCTCTACGACGGCTCCGCCGCCAACGGCAGCTTCCTCGACAACCTGATCAGGTCGAGCCTGGAGTCGGGCGTGCCGCGGGAGCACGGCAACGGCACGGCCGCCGGGGCCCAGGCCCAGCCGGAGAACCTGGGCGGTAGCAAGGTCCTCATCGACCAGCTGTGCCGGAACTCGCGGCGCACGCCCCTCCCGCGGCCCATGCAGCAGGACAGCAGCGAGGACGAGGCGCCGAGCTTCAAGCGCGGCCTGCCCGAGCGCCCGGAGCGCGTGCCCACCGTCGACCTCAGTCCCTCGCCCTCGGACCGCGCCCGCAACGCCGACGACCAGGGCAGCGACCGGGGCCTCGCCTCCCCGCCCACGCCCCTATCCCTCTCGAGGCTCAGCGGCTCGGGCAGGGAGGACGAGACCACGAGGGACTCGAGGAGCAGCCGTGAGCGCGAGGTACAGAATGGCGGCGGCAGCGATAAGGCGGAGGACCGCCAGGACTCTAACAACAAGAAGCTGAACCACTACCCGGACATACACAACCTCTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACACAAGGATTACGCGGCCGCGGCCGGCGGCGGCCTGGCGGTGCAGCTGCAGCGCGGCTACAGCAACAACGGGGCGGCGACGGGCAACGGGCGCCCAGCCACGCCCAACGACCGGCAGACGACGACGACGACGCCGCCGCCGCAGCCGGCCTCGCAGCAGCAGCCGCGGGCGCCCTCGCAGGAGCGAGCCTCCCCCGTGCCCAGTCCCCAGCCGGCGGCCATGGAGGAATCGGTAGAGCAGTAG
- Protein Sequence
- MLGKKWSDRRSDAVQTFWLKSGGGRLALEAWRPAGTEVYKSLSFRAGRPWLRAPQADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSSLEGSGGESLRQLLQRGQEAGAAEWSAFEHANIGPYIQKMLAAAAPFKGMESQDYRIPEVMRRLMCEDKKLNKDGSLNGDQVQHLHGSLQHRLPQSGQRAPMTNDDFNPAIEEEASDSGQGRAILKIPSYKPASSGGGAAGPGGVPSKNGAEAFAQSFAAAAAAAANAPTNSLVGKGMAVNFRDVIAKSISVKFQEGQPASGMTGQNAGGQSLIAESNPYKRGRYTPPAGAQQTGAQQSKAAAQAQQDKQQGKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPEDKVKETTAATAALRTSSAAAAVEKKPLLKPQKPFSPAAGGAGMPGPNGLKMPFMDGMPHLPFAHPFNFWGPTPFMPSPFIPGGPNVPGILPEQYFATQRMRGLQEQQRNAIAQQQQRGEPGAAAGEQPGTSNSRGATIMKSPRELAEGLYDGSAANGSFLDNLIRSSLESGVPREHGNGTAAGAQAQPENLGGSKVLIDQLCRNSRRTPLPRPMQQDSSEDEAPSFKRGLPERPERVPTVDLSPSPSDRARNADDQGSDRGLASPPTPLSLSRLSGSGREDETTRDSRSSREREVQNGGGSDKAEDRQDSNNKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQQHKDYAAAAGGGLAVQLQRGYSNNGAATGNGRPATPNDRQTTTTTPPPQPASQQQPRAPSQERASPVPSPQPAAMEESVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -