Sagr003452.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- kn
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000066.1:512637-520601[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-55 7.9e-52 176.7 0.0 205 293 1 101 1 102 0.99 2 2 4.3e-43 3.4e-39 135.0 17.0 321 564 102 336 101 347 0.74
Sequence Information
- Coding Sequence
- ATGCGCCGCTTCCAGGTGATCATTTCTACCCAGGTCGGCGTCGAGGGCCCATTGCTGGCGGTTTCGGACAACATGTTCGTTCACAACAACAGCAAACACGGTCGCAGGGCGAAACGACTGGACCCCAGCGATCCTGGAGAGTACAACAGTCTCTATCCACCCCTACAGATGGCGACGCCCTGCATAAAGGCAATATCACCGAGCGAGGGTTGGACAACGGGTGGCTCGACAGTGATAATAATTGGCGATAACTTCTTCGATGGGTTACAAGTCGTCTTCGGAACAATGCTCGTGTGGAGCGAGGGAAAACAGTTTTGTAAAGGAGCGCCTGGACGATTTGTATATGTTTCCTTGAGCGAGCCAACAATCGCATACGGATTCGAGAGGCTACAGAAGCTTATACCACGTCACCCGGGCGACCCGGACAAACTGCCCAAGGAGATCATTTTAAAGAGAGCGGCCGACCTGGCGGAGGCGCTTTACAGCATGCCAAGAGCAGCAAACGCCTCGAGCATATCCTCGGCGCCGAGGAGCCCGGGCTCGAGTCACGCGGCGCAACCGCCTACCTCGGGCTCCGCTACGGCCTTCAATTCGTATACAGGACAACTGGCGGTAACCGTTCAGGAAAATGGAACCTCCTCCAAGTGGACAGACGACGGGACCTCGGTGACGACGGGGGCCGGTAGCGGCACGAACGGCAGCAACGCCGGTAACGGGGCGGCGAGCAACGCGGGCAGCGCCGCCGGCAACCCGGACGCCTACCGGCAGAGCAGCAGCGCTAGCCCTCGGGGGGTCGTCTCCAGCGCCGGGGGCGGCTACTGCGGCAGCTCGGCCAGCACGCCCCATAGCCACAGCACCAGCGGCAGCTACTCCGTCGCCAATCCCTACACCGGCAGTCCCACCCTCTACACCTCCCCGCACGAACAGTACGGACTTTTCTATACGTCCGGGGACAGCAGTGCTTTCGCCCCCGTAGTTCGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTGGCTACGGCAGCCCAGTAA
- Protein Sequence
- MRRFQVIISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYPPLQMATPCIKAISPSEGWTTGGSTVIIIGDNFFDGLQVVFGTMLVWSEGKQFCKGAPGRFVYVSLSEPTIAYGFERLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRAANASSISSAPRSPGSSHAAQPPTSGSATAFNSYTGQLAVTVQENGTSSKWTDDGTSVTTGAGSGTNGSNAGNGAASNAGSAAGNPDAYRQSSSASPRGVVSSAGGGYCGSSASTPHSHSTSGSYSVANPYTGSPTLYTSPHEQYGLFYTSGDSSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00692695;
- 90% Identity
- -
- 80% Identity
- -