Spul009466.1
Basic Information
- Insect
- Sussaba pulchella
- Gene Symbol
- -
- Assembly
- GCA_963971145.1
- Location
- OZ020167.1:11476399-11483292[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.12 11 7.1 1.6 1 21 914 934 914 935 0.95 2 10 0.0037 0.34 11.8 1.5 1 21 943 963 943 964 0.95 3 10 0.04 3.7 8.6 0.0 2 23 1028 1049 1027 1049 0.96 4 10 0.04 3.7 8.6 1.6 2 22 1152 1172 1151 1172 0.95 5 10 0.2 18 6.4 0.1 2 23 1189 1210 1188 1210 0.95 6 10 0.0048 0.44 11.5 0.1 1 19 1287 1305 1287 1307 0.95 7 10 1.1 1e+02 4.1 3.0 2 23 1329 1351 1328 1351 0.92 8 10 0.083 7.7 7.6 0.6 1 21 1774 1794 1774 1795 0.94 9 10 5.3 4.9e+02 1.9 0.5 1 23 2233 2259 2233 2259 0.85 10 10 0.00087 0.081 13.8 0.0 3 20 2263 2280 2262 2282 0.95
Sequence Information
- Coding Sequence
- atggaggGTGATAGCGTTGTCGTCGAACAAGAGCAAACCGAACAAGAGCCGTCGAAAGACGTCGACGATTCTCCGTCGCAAGGTGACGATAACGAATACGACGAGAATGAAATTTTCCAATCCGTGTCGAATAACGCGCGGAACGATGAAACTTCcgaaattacggaaaaatccATCGTTTCCTGGTCCACGTCCAATCCGGATCTCTTAAAAATGTGCAAGCCAATATCCGTTAAAATAATACGTTTACCGGATGCGGCTGTAAACAAATTCATAGCAgcttcgaatttcaaattgaaaaagaagcaGATCCAATACAAATGGAAAAGCGGCTTCATCGGACGTcacaaaagaaacaaatactTGCGACGAAGAAGATCGCAGATGCTCAAAGCGAAGGCCCAAGTGTTAATGTCATTGAAATTGAGCGTGGATGGGGAAGCCATAAATCACGTAGGTACATCTAAGCTCGACGAAAAATCTGTTTTATCGACCGAGTCGACACCGGTGGAAAACAACAATGAATCCGAAGATacggaaaaattgacgaaaccGTGCGAACCCGTTGCCGATAAAGAAGTTCCACCTGAATTATCGACGATTTCATCGACGGTCACGGAAATTCGTGCAACGACTCCGTGCGAATCCGATCAAACGGAAATTCCCAAAGATGTCGACGGAATCGAAGATTCTTCGGCCacgaaaattcttcaatctccgATTTCCTCACCCGACGATGCGAAATCGTCGCCAAAAACTAGTCCCCTCGTTATCACCgaacaaaataacaatttaaatAGCGAAACAATAACGGGAAGGTCGTCGGAAAGCGATTCGACGATCAACCCCGTGGAGATGAGAAAAAGACTCTACCGATCGGACGACGAAGAAATCGAAGCCCTACAGACGCATACAccgaaaaaatccaaatgtTCCGAAATCCCAGACGCGCCGGAGATAATTTATTCGACGGTAGAGACAAACCCTGCCGATTCGATCGAAACCATCCCCCCAATGACCGAAAATTTGCGAACAATCGATGAGACCGGATCGACACGAAAATTCGTACGACGACGAACAAAATCAACGGCCGACAACATTTACAAAGAATCCAGGGTAGTTCTGTGCAAGATCGAAGATTCTCGCGATCCTTTCGTTCTAAGATGGCGAATGAAAATGGCTCTGCAAAATTTAAACGAAGTCGTCGTGAACGATTGCAGAACCAGCAACGACGATACCCCAGAAGCGTTCGATCTCGGTAAAGAGctcaacgatttttccaaaaacgccGTCGAATCATTGTCCGAAGACGACGTGGCTGCTGCAACGCTCGACGACGAATCCGCGACTCCGACGGCTTTCGAAAGCGCTCGAAATGACAGCGAAATCGACGAGGACGATTCGGAAATCGTTACGTTTTTGCGGGATCGAAGAAAATCCAGGCCTGCGATATACAGTTCGAGTTCCGCGAGCTCGTCGCAATACGACGATGCTTCGTCCAACCGATCTTCGCCTAACGGAGGATCGGTCGGTTATTCTCCGTACCCGGACGAATTATCCGATTgtcaagaagaagaaatttcGCGTCCCCAAACGGCAACCAAAAGACGGCCTTTCACTCGCCAACGAATAAGAAGCAAATCTTCCAGCAGCGCCGCTTCCGACGACAATCTTCTTCGTGACAAAATTCGTCGATCACCGTCGACTCGTCGCAAAGCTTTTCAAATCGCCATGCACGCTTCTTGCATCGATAGATTCAACACGAGCGACGAATCCAACAACGAAGCCGAAGAAGAAACATCGAATTCCATCTTCGGCAACGAATGTTACGAACGCGCGGAAATTACGaatctcaataaaaataaagccggaagaacggaaaaaaccGCGAATGGTTCGGACGGTAGAACTTCGGATTGCGCGACGGTTGGTCAGGATCGCGACGACGACGCTACGTCGGATTCTCTTGACAAAGCGAATCGCGAATTTTCGCAAATCGACGATGCTAGTTCGACCAATCGTGACGAAGATCTCGAGGCACGTAGAAAACTGACGGAGTTGAAAAACGCGATGGTCGTGCTCACGAGGTTGGAAGATTTGGACGATATTTCCGAAGACAGCAGACATCACGGCAGTGAGAACGAATTCACGATTGCGCAGGATTACGAATTTCCGAGAACGATGAGTCCTACGTTGGATCCTTTGGCAATCAACGGAGACGTTAATCCAAATCCCAATTACGAGGCTGATTACTCCATTATGCCTGATTACCGCAATTTGCCGGATCGAACGTCCGTAAAAACGCCTCGGCGCAAAGCTCCCGGGTCCAGGATTGGTCAGGGAGTCGCGAAATCGAACTTGAACACGAGACTGGGCGCGGAAGACTCTCACGAAACAGCGGAATCCGACGTGGAAATGACGCTGCTTTGGGAACCAACGGATTCGGATGCCGAAGCTTCGATCACGTCAGCCCATTCGAACAATCTTGGCACGGTCGCGGTCGATGGCGTGCAAACGACGGACGCGGAAACCGAGAGAATTGTCCAATCCATGCAGCTTCCGACCATAGTTTCCGTGCGAAGTCTCGCGCAGGATTGCCCGACGGACGAAAACAGCGACGGCAGCGAAATCATGCGAAACGACGAGAATCTCGGTGAGTATTGGAAACGCGGCGCCGTGGGATGCGAAAAACGCGAAACCGTTAAGCGGCCCGTCGAACGGAAAACAAGGTTGGTGAAGCACACATGCACGAAATGTCGAAGCTCGTTCGACGATTTCGAATCGTTGTCGATCCATCAAAAATCGAGTCTCCTCTGCGCCGGTAATTATCACTGCACCACTTGCCAAATGACCTTCCCCACCTTCGCGAAGTTGAGGAGACATTTGATGTCTTGTGCCACCAAAGAGCCGCAAAAAGAAACGCCCGTCGGTGAATCAACGAACGGCGTTAAAACCGCCAATCCCAAGAATCTTCTACGTGCCGTTcgcaaaaaatcatcgacgaatgtggaaaaaaatcaagcaaGTCTGAAAAAACACAAGAAGAAGAGCTCGAAAACTCATTCCAAAATCGATCATCTCATGTGCGGCGTTTGTACGATTGTTTTTCCATCGACGCAAGCATTGGCCGATCACATTTTCACTCACACCACGGAGGAGCTTCAAAAAGCTTATCGAGACGCCAAGGACAAAGAGGACGGGGCGTCGTCGAGCTCCGTTTCCGAATCCCAGATCGAAAAAACCAAGACACGCAATGCTGTCgccaaaaaaacaacgaccAACAAGAGTCTTCCGGTGCGAGCTCGGGTGGAAACGTCCAAAGAAATTCAAACCCGCCCTGCTATTTCCGTAACCGATCCTTTGAACGCGGTCCGGGCGACCGTTTGCGCTTGCCACAGAGACGAACAACCGGCGTGTCCGGACAAAACGGATCTTCAAATAGAAATGGTACTCTATTGTCGATTCTGCGGTGTTATCTTTCGACGTCGCGAATGCTTCGAGATTCATTATCGCACGAATCCGCAATGCGCGACTAATCGATCACGCGGCCGATTGCCGAAACTTTATTGCGCGAATTGTCAGGTGAGCTTGAACAGTTGGGCGGGTATGCGACGGCATTTGGAAATTCACGCGAGTTTGAACGTCGAAGGAACTGTGCGTTTCGTTTGTATGATATGCCGTGTCATATTCGTCGGTTTTGGAACACTTTTTTACAATCATTGGTCGAATCATTTGAAGGACAACATGTTGGTAGCGAGTTCATACTCGTTTCCCAAATCCGCTGTACAGTCGATAGAGGGCGTGCCTAAATTGCCGATCGGTGCGACGCAACAAGAAACTTACATACTCGTTGCCGAGCACGTTTGTCTGGTTTGTCAGAAACCTTTTTCAACGAGACGCGATTTGGAGATGCACGAAGGCAGCGGCCAGTGCAGGTCCGAGGTCGAGAGCACGGAGAAGAATAAGGCGGAAGAATGTAAATGGACCTGTAACGCTTGTAATCTAACTTTTCCGGTCAGAAGAGGATTGAATCATCACAGCAAACACCGTCACGAACAGCGTTATATTTGCGTAGCCACGACACCGGAATTCCAAACTTTCATGTGCACGCGATGTTTCACCATGATGAAAACGGTCAAGGACATTGAAGATCATTGGAGGCATCAGCCGGGCCACGAGGGCACTCTCTCTCAATTCCCTCAACTTCCATTCCAGAATGCTGCTCGGAATCAGGTGACAAGCGTGAATTCGGTCGATAACGAGAGGACCAACGAAATGGTGATCGACATCAGCGGTGATGGTCAATTGGGAAACGACTCCCAGCTTGTGAGAAAAACCCACGATTCGGGCGGTACAACTGCAAACATGAACaatacgacgatgaattcACTTTTGGAAGCGGTGTTGACGAAGGACTCCGCTAACGATCAAACGACCAAGATACGAGCCCTCGAAGATCCTTGCGTGAACATCGTGCTATCGGAGATATCCAAAGAAAACGTGTCCGCTAAATTGGTAATCGAACGTTGTCAGAAGAATAAGGCGACATCTAGCGACGATGGAAAGGAAATCGAGTCCTATCAAATAATCCTGTCGGAAAAACCTTCACCGGGAAATATAAAGATGTCACTTGGTAGGATAGGCGCGGAAAGCACGACGGTGAAGAGACCGACCGCGACTGTAACGGGTACCGAGGCAAACAAGCAGGGGCCGATGGTGAATGATCCACCCGTGACGGCCGTATCTTCCACGCAAATCGCTCAACCATCAACCCCGACCAAGAGCCCGCGTCAACATACCGTAATCCGCACTCCGCACTCGTCAAGACCGACTTTTACGGACGAAAAAGAGAACAGCAAATTGGCGAGAGCTTTGACATCAAAGAGGGGCGATTTTTCCGTCTCTCTTTTGCAAAACAGTCGGCCATCTTTCCCCGAAATTATTGACATAGCCGACGAAAAGGAAGAATTCCAGGGTAGACCAACAGCGAATCTAGGAAACGCTTGCAAGCTTACGCCCATTGTTGCGAATAACAACGCCAAACCGGCCGCTTGTGCCAATTCCGCAGCGCCCAAGTCGAAAAAGATGGTGGCCATAATAAACCCATCGTCGAAAGAAACTTCCTCGGTCAGTTCCGCCACGCCGCACCATTCGCATTCCTATCCCCTCGTGCTCAACCCCTCTGAAATGTCTTTCGAAGAAATCCGTCTGGCGGATATGACGCGATTGAAGCAATTGCCCACCAAAGATTCCGCGGAAGCCAAGAAACCGGGTTTTCTTCGTGTAAAAAATCTCTCCGAACTTCAAGCCGTGAAGACGCACACTTGCAATACTTGCAATGCCGCTTTCGAGTCTGACGAATTATTGGAGAACCATCATAAGCTACGTCTGTGCAGGCTCGCCAACAAGAACTCTCAATTTCCGAAAGGAATGACGGCGGCTCTCGTTCTTCCGGACAAACCCGACGATTCGTCGGACAAACAGCTACAGGAGGTTTACGCAGCCGGCGGCGTCGTCGCGCAGCAATTGATCGGGCTTGATTCCGGAATAGGAGTCATATCCAGTGTTCCGCTACCGAACATGATCGTGGACAATGAAACTACAGGATCCTGGATCGCAGTTGGCAACCAAAACGATTCGATGTCGTCGATAGCGTTGGTAAATTCGACACATTCCTTTTCGGGCGGGACGGTATTGATGAATTTGAGCGGCCAACAATCGACGAGCCAAAGCGCGGATGGCCTGATGACCACATCGTTGACGTCGACTTCGACTATTTCTCACGCTCAAGGGACGTTCGCGGTGGAGCAGCAGCTGTATCATCCGCGACAGCAgctccagcagcagcagcttcaGCGTCAGCAGCAACTTCAGCAGCCGCATCAGGTTCAGCAGTCGCAACTtcaacagcagcagccgcaacaAGGGCCTCCGACGTTGAGTTCGAACCAGCATTCCGGTAACAATTGCAGCGGACAATTTGGATTTCACGTCATGCCTTCCATCGCCGTACCGCGACAGTCGCAGATGGACAAGCAACAATGCATCGAAGGTCCACCGCGCAACAGTCCCACGGGAAATCTTTCAATCAACGGCCGTATGAACAGCACCAACGTGCCTTTCACATATAACTCCGATAGGCCAAACAGATTTATCTGCAACATATGCACTACTTTCAGCTGCAACACCGTTGGCGCTATGAACAGTCACGTGATGAAGCATTACACGGGTTTCAAACATCAAGGAACAAATCAGAATTTTACGCTACCCGGGGCAGGAACGATATCGAACTCCCTGGTTATAGGTCAAATGGACGTACCATCGCAAAATGTTCAGATGCAGTGCACCGACATGCAGCCAAATACGCCGGGCAATCTCATGAACAATGCAATGTTCATGAGACACACGCCTCAAGGTGTGGTCTGGGTGACGTCTCTGACGGCAATGTCGGGACAACGAGCCGCACTCGCCGACGGAGACTTGAATCGATCTTCAGCATCCCCAAAAACTTCCCAACCCGATCATCCGACTAATTCCAATCCCACGGCGATGGCCGGTGGTCAGGTGGTCTACCGTTGTTTGATTTGCAAATCCGCAATGTACAAAGCTTATCAGCCTCTGCGCAATCACGTTATACTCGTTCACGGGATCAATGATTCGGCTTCCACGGGACTCGAAAATATCGTACAAAAATTGTATCAATGCACGTACTGCGCACCCGGAACGGTTACTTACGACTCGGACGAAAATTTGCGTCAACACATCACGGCTTGTCACTCGAACGCGTGTCCGATGTGCGGCCGGACTTTCGTAAGCCCGCTGAGCTTGAAAACGCATATTGGATATTGTGTGATTAACAACGGAGATTCGAAAACTTCTCATCCCAACCCGTGA
- Protein Sequence
- MEGDSVVVEQEQTEQEPSKDVDDSPSQGDDNEYDENEIFQSVSNNARNDETSEITEKSIVSWSTSNPDLLKMCKPISVKIIRLPDAAVNKFIAASNFKLKKKQIQYKWKSGFIGRHKRNKYLRRRRSQMLKAKAQVLMSLKLSVDGEAINHVGTSKLDEKSVLSTESTPVENNNESEDTEKLTKPCEPVADKEVPPELSTISSTVTEIRATTPCESDQTEIPKDVDGIEDSSATKILQSPISSPDDAKSSPKTSPLVITEQNNNLNSETITGRSSESDSTINPVEMRKRLYRSDDEEIEALQTHTPKKSKCSEIPDAPEIIYSTVETNPADSIETIPPMTENLRTIDETGSTRKFVRRRTKSTADNIYKESRVVLCKIEDSRDPFVLRWRMKMALQNLNEVVVNDCRTSNDDTPEAFDLGKELNDFSKNAVESLSEDDVAAATLDDESATPTAFESARNDSEIDEDDSEIVTFLRDRRKSRPAIYSSSSASSSQYDDASSNRSSPNGGSVGYSPYPDELSDCQEEEISRPQTATKRRPFTRQRIRSKSSSSAASDDNLLRDKIRRSPSTRRKAFQIAMHASCIDRFNTSDESNNEAEEETSNSIFGNECYERAEITNLNKNKAGRTEKTANGSDGRTSDCATVGQDRDDDATSDSLDKANREFSQIDDASSTNRDEDLEARRKLTELKNAMVVLTRLEDLDDISEDSRHHGSENEFTIAQDYEFPRTMSPTLDPLAINGDVNPNPNYEADYSIMPDYRNLPDRTSVKTPRRKAPGSRIGQGVAKSNLNTRLGAEDSHETAESDVEMTLLWEPTDSDAEASITSAHSNNLGTVAVDGVQTTDAETERIVQSMQLPTIVSVRSLAQDCPTDENSDGSEIMRNDENLGEYWKRGAVGCEKRETVKRPVERKTRLVKHTCTKCRSSFDDFESLSIHQKSSLLCAGNYHCTTCQMTFPTFAKLRRHLMSCATKEPQKETPVGESTNGVKTANPKNLLRAVRKKSSTNVEKNQASLKKHKKKSSKTHSKIDHLMCGVCTIVFPSTQALADHIFTHTTEELQKAYRDAKDKEDGASSSSVSESQIEKTKTRNAVAKKTTTNKSLPVRARVETSKEIQTRPAISVTDPLNAVRATVCACHRDEQPACPDKTDLQIEMVLYCRFCGVIFRRRECFEIHYRTNPQCATNRSRGRLPKLYCANCQVSLNSWAGMRRHLEIHASLNVEGTVRFVCMICRVIFVGFGTLFYNHWSNHLKDNMLVASSYSFPKSAVQSIEGVPKLPIGATQQETYILVAEHVCLVCQKPFSTRRDLEMHEGSGQCRSEVESTEKNKAEECKWTCNACNLTFPVRRGLNHHSKHRHEQRYICVATTPEFQTFMCTRCFTMMKTVKDIEDHWRHQPGHEGTLSQFPQLPFQNAARNQVTSVNSVDNERTNEMVIDISGDGQLGNDSQLVRKTHDSGGTTANMNNTTMNSLLEAVLTKDSANDQTTKIRALEDPCVNIVLSEISKENVSAKLVIERCQKNKATSSDDGKEIESYQIILSEKPSPGNIKMSLGRIGAESTTVKRPTATVTGTEANKQGPMVNDPPVTAVSSTQIAQPSTPTKSPRQHTVIRTPHSSRPTFTDEKENSKLARALTSKRGDFSVSLLQNSRPSFPEIIDIADEKEEFQGRPTANLGNACKLTPIVANNNAKPAACANSAAPKSKKMVAIINPSSKETSSVSSATPHHSHSYPLVLNPSEMSFEEIRLADMTRLKQLPTKDSAEAKKPGFLRVKNLSELQAVKTHTCNTCNAAFESDELLENHHKLRLCRLANKNSQFPKGMTAALVLPDKPDDSSDKQLQEVYAAGGVVAQQLIGLDSGIGVISSVPLPNMIVDNETTGSWIAVGNQNDSMSSIALVNSTHSFSGGTVLMNLSGQQSTSQSADGLMTTSLTSTSTISHAQGTFAVEQQLYHPRQQLQQQQLQRQQQLQQPHQVQQSQLQQQQPQQGPPTLSSNQHSGNNCSGQFGFHVMPSIAVPRQSQMDKQQCIEGPPRNSPTGNLSINGRMNSTNVPFTYNSDRPNRFICNICTTFSCNTVGAMNSHVMKHYTGFKHQGTNQNFTLPGAGTISNSLVIGQMDVPSQNVQMQCTDMQPNTPGNLMNNAMFMRHTPQGVVWVTSLTAMSGQRAALADGDLNRSSASPKTSQPDHPTNSNPTAMAGGQVVYRCLICKSAMYKAYQPLRNHVILVHGINDSASTGLENIVQKLYQCTYCAPGTVTYDSDENLRQHITACHSNACPMCGRTFVSPLSLKTHIGYCVINNGDSKTSHPNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -