Basic Information

Insect: Sussaba pulchella
Gene Symbol: -
Assembly: GCA_963971145.1
Location: OZ020173.1:4351520-4355197[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0028 0.26 12.2 0.1 1 20 152 171 152 172 0.96

2 13 0.0062 0.57 11.1 4.5 2 23 308 330 308 330 0.93

3 13 7.4e-05 0.0069 17.2 1.0 2 23 382 404 381 404 0.95

4 13 6.8 6.3e+02 1.6 7.6 3 23 489 510 488 510 0.95

5 13 0.0018 0.17 12.8 1.0 2 23 562 584 561 584 0.93

6 13 0.0012 0.11 13.4 0.2 2 23 632 654 631 654 0.91

7 13 0.0049 0.46 11.5 0.2 3 23 679 700 678 700 0.92

8 13 0.0089 0.83 10.6 3.6 2 23 768 790 767 790 0.96

9 13 0.017 1.6 9.8 2.4 3 23 805 826 803 826 0.94

10 13 0.00046 0.043 14.7 0.1 2 23 872 894 872 894 0.93

11 13 0.056 5.2 8.1 1.6 1 23 974 996 974 996 0.98

12 13 6e-05 0.0056 17.5 1.3 2 23 1011 1032 1010 1033 0.95

13 13 0.18 17 6.6 0.4 1 23 1107 1130 1107 1130 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0028	0.26	12.2	0.1	1	20	152	171	152	172	0.96
2	13	0.0062	0.57	11.1	4.5	2	23	308	330	308	330	0.93
3	13	7.4e-05	0.0069	17.2	1.0	2	23	382	404	381	404	0.95
4	13	6.8	6.3e+02	1.6	7.6	3	23	489	510	488	510	0.95
5	13	0.0018	0.17	12.8	1.0	2	23	562	584	561	584	0.93
6	13	0.0012	0.11	13.4	0.2	2	23	632	654	631	654	0.91
7	13	0.0049	0.46	11.5	0.2	3	23	679	700	678	700	0.92
8	13	0.0089	0.83	10.6	3.6	2	23	768	790	767	790	0.96
9	13	0.017	1.6	9.8	2.4	3	23	805	826	803	826	0.94
10	13	0.00046	0.043	14.7	0.1	2	23	872	894	872	894	0.93
11	13	0.056	5.2	8.1	1.6	1	23	974	996	974	996	0.98
12	13	6e-05	0.0056	17.5	1.3	2	23	1011	1032	1010	1033	0.95
13	13	0.18	17	6.6	0.4	1	23	1107	1130	1107	1130	0.97

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGAGATCAGCCGGGCGTGACGATCGAGCAAtcgcaccagcagcagcagcacatCAGCGAGATCGACAGCGAGAGTTCGAGCGGTTGCGAGGATCGCGACGCGAGAAAACGTTTGCGTGAAGACGCGGACAACAACAGCACCGGAAGCAGTCCGAAAAAACGGCGAAAACAAACGACGCCGGTGCGATTTCCGGCGACGCCGATGGGCGTCAGCGGCGGCGAACCGGCGGATTCCGAGGACGAAGCTGACGACAACGagttcgacgacgacgacggcgagcCGGAGGACGCCGCGTTGCTTCCCCACGACGAAGACAGTCATCCGCAGCTGGAAGGTAAGCCACGAACGCTATCACCGCAGGCTTTTATAAGAAATATCCTGCAAACAACCGCAAccacgacaacaacgacgaaagACGAAAATCTCAACAGCGAATTTCGTTGTCAATTCTGCGGTCTTTCTTTCGACGTCAAGGACGCACTCGCGAGTCATCTCGAGTGCGAACACGGAATTACCGAGAAAAATTCTTACGAACAATCGTCGTTGCAAATGGCGACGAACGATTCGCCGATTTCCGGTCAGGTCCGAGTCAAAGTCGAATTGGGCCAACAAACCCTCGAAGAACCCGAGAGTCCGGTCAATCTGACCGGTCTCGGTATCAAAAGTTTCGCCGCGAATTGGTTAAATTCTCAAGGTCAGATCCAACAAAACGCGCAATCATCTCCCCAATGTCCCGAAGATTGGTCTCCATCGACTTCCCTTCCCAATCACATTCAGGCTCTGTCCTTTCCCGGAGCTCTGGCTCAGTACCTTCCTCTTCCGGGTTTTTCCATCAACGACGCCGGACAACTGCCGCGTCCGCCCGTCGGTCCAGCACCCGTAAGAATCTTCAATCCCGACGCTTACTGCGATCTCTGCAACAAAGAATTTTGcaacaaatattttctcaaGACTCACCGAGCTAACAAACACGGAATCTACGTGGACGCCCCAACCTCGAATCCCGGTGAAACCAACGTTACCGGTAATTTGTTCGCCGGAACTTTTACTCCCGGAAACGAGCAACAATCGCAGAGAATCGAAGTTCCGGTTCCGTTGATTTCCGTGCCCTTGAACAACTCGATTCCCTGCGAGGTTTGTCAAAAACGTTTCAAAAACGACGATTCGCTGAAGaaacacaaacaaaaagtTCACAACGATTCCATGGACAATCAAGAATCGCATTCGTTGCCGGCAACCGGAAGTAGCGTGGACGAGGACACGTTGGGCAACAGTCCGAGCGCCATGGAAGCGTTGTTCAAGCAGGAATTCGGCGTGGAACAGGAAGATTCGAAATTCATGCCGGCACCGCGACATCTGTCACCGCAATCCAGTCAACAAGCCCGAGATTCCGGTTTCAACGCCGATCGATTGCGCAGACTCGGAGTTCTCAATCCCGAAGCTTTCTGCGAGATATGTTGCAAAGAATATTGCAACAAGTACTTCCTGCGCACGCACAAGATGAAACGACACGGAATTTACATGCAAGAGAGCGAAAAATCACCGGGTAATCCGGCAACAGCCGCGACCTGGCATCAAATACAAACCAGTCCTCTCAATCTCATCGTCACCGAAGGCAATCCCGGAAGTTCTTCGGAATCCGGTGATCGCCCGACCGAAGATTGCGATTGCAAAATTTGCGGCTTGCGTTTTCAAACTCCGGGATTGTACAAAGCTCATCGCGCGAAGATGCACGAAAACGATGACGAAAAATCATCGCAAAACGATTACGACAACGAATCCGCGGATCAACGAACAGAATCCATTTCCGAGGATCTGCAAAAATTGCAAACAATGATATTGCAACTGAACGGTTTGAATACGAACAAAACATCGAGTTGCAATGTCTGCGGCAAGGATTTCGAGAACATCAACGATCTGAGGAATCACGTGACGTTGGAACACGGCGTGATTGCGGAAGAGACGTCATCACCCGGTCGACCCAACGAAGGTTCGCCAGTCGGAACTTCGAACTTTTGCACTTTGTGCGACAAGGATTATCAATCTCCGGACGCGTTGAGACAACATATCACGGATGAACATCAATCGAATCCAAACAACATGGCGACGTCGATTCCTCAAGTTCCCACGGTCGCGGCTTTGATTCCCATGCAACCTTCACCGGCCCCGTCGGTAATCGCGGCGATAGCCGTACCGATAGCTTCAACAGCCTCGCTGCCACCACCTCCAACTCCGACCTCACAACCcgagaaaaaaaccatttcCATGACACCGACTTCGAGTTACTGCGAGATATGCAACAAAGAATTGTGCAACAAGTATTTCATGAAAACCCACATGCAACGCATGCACaatatcgaaattgaaaatggtTCGCAGATCGGTGGTGTGATATGCAATATATGCAACAAAGAATTGTGCAGCAAATATTTTCTACGGGTTCACAAACAAAATACTCATGGAATCGTGGACGAGAGCAACACCGCGGCGGCGAACAAACAAGATTCTTACGAAGCGCCGAGCAACGATGATACGGCCCTGAAACCGGATCAATTGGGCGATCTGAGTCATCGTTATTTCACGCATTTCACGGAAGTTTGTCCGATCTGCAGCCGTAGATTCAGAAGTATAAAATGGCTGAAGGCTCATCTTTTGGGCGAACACGGACGACCGGGAGTGGAAAAATGGCGGGAGCTTGAGAATCAGTATCAAAATTCGACGCGTAGTGGCGTGAGAACGTCCGTGACTTCCGGTAGACCAATTTCGCACAATCAAAGCCTGAAAATTCCCAACGGATTGGACGTCATGCAACAGATGAAGAACAACGATTACGCGGGTCTTGGAAATCAAGTTTTGTCGAGTCTTTTCGGTTCTTCGGTCGACGAACAACAAGCGAAGAATTATCGTTGCTCGTATTGCAATTTTACAACAACGGTGCTgccatttttgtttcttcacgAAAGATCTCACACGAGTACGCAAGACAACAATCCGGGAGTCGAAGGTACATTGCAGTGTCCCATATGTCCTCAAGCTTTTGGACAACCCGAATTGTTGCATCATCATCTTTTGACGCATCATCAATTTTCCGGATTATTGTCGCAATTTCAAACACCGATGATCAACCATCCGAGACTCGACGACCCCAATTTCGACAGAAACAACGagaattatgataaaaatgatttcgaaGCGAAGGAAGAACGTCGTCAGGGTAGTCCTCAAGCTTCCGTGACCGCGGAATCCGTCAAGAGTCAAAAATCCGACGATCAAGTGGTTCGTGTGACTCCTCAGGGTGCGTTCAAGTGCGCACAGTGCGGTTTCGCAACGGCCAATGTCAATAGAATTCGCAAACACGTGAGAAAAGATCACAAAACGTTCGGTGATGCGGCGGAAAGCGTCATAGGAGAATTGACGAAGACTTTGAGAGACGTCGCGAACAAACACAAATTACCGGCTAGTTACGCGATGCCGCAGGACATGAATTCAAATCCGGACGCGACGGTTATGCAACCTTTTTTGATTGAGGAACGCGAAGCGACGATCGCGGGTGGAGAAACCACCCAGGAGAGGCGATTCGCACCTGCTCTGGTTTATTTGCCCGTAAGAGCCAGAGTCAACAATGTCCTTACCGCGTCCTTCACCCTGAGCCCTGCCTGA
Protein Sequence: MASTVARDQPGVTIEQSHQQQQHISEIDSESSSGCEDRDARKRLREDADNNSTGSSPKKRRKQTTPVRFPATPMGVSGGEPADSEDEADDNEFDDDDGEPEDAALLPHDEDSHPQLEGKPRTLSPQAFIRNILQTTATTTTTTKDENLNSEFRCQFCGLSFDVKDALASHLECEHGITEKNSYEQSSLQMATNDSPISGQVRVKVELGQQTLEEPESPVNLTGLGIKSFAANWLNSQGQIQQNAQSSPQCPEDWSPSTSLPNHIQALSFPGALAQYLPLPGFSINDAGQLPRPPVGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHRANKHGIYVDAPTSNPGETNVTGNLFAGTFTPGNEQQSQRIEVPVPLISVPLNNSIPCEVCQKRFKNDDSLKKHKQKVHNDSMDNQESHSLPATGSSVDEDTLGNSPSAMEALFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNADRLRRLGVLNPEAFCEICCKEYCNKYFLRTHKMKRHGIYMQESEKSPGNPATAATWHQIQTSPLNLIVTEGNPGSSSESGDRPTEDCDCKICGLRFQTPGLYKAHRAKMHENDDEKSSQNDYDNESADQRTESISEDLQKLQTMILQLNGLNTNKTSSCNVCGKDFENINDLRNHVTLEHGVIAEETSSPGRPNEGSPVGTSNFCTLCDKDYQSPDALRQHITDEHQSNPNNMATSIPQVPTVAALIPMQPSPAPSVIAAIAVPIASTASLPPPPTPTSQPEKKTISMTPTSSYCEICNKELCNKYFMKTHMQRMHNIEIENGSQIGGVICNICNKELCSKYFLRVHKQNTHGIVDESNTAAANKQDSYEAPSNDDTALKPDQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLLGEHGRPGVEKWRELENQYQNSTRSGVRTSVTSGRPISHNQSLKIPNGLDVMQQMKNNDYAGLGNQVLSSLFGSSVDEQQAKNYRCSYCNFTTTVLPFLFLHERSHTSTQDNNPGVEGTLQCPICPQAFGQPELLHHHLLTHHQFSGLLSQFQTPMINHPRLDDPNFDRNNENYDKNDFEAKEERRQGSPQASVTAESVKSQKSDDQVVRVTPQGAFKCAQCGFATANVNRIRKHVRKDHKTFGDAAESVIGELTKTLRDVANKHKLPASYAMPQDMNSNPDATVMQPFLIEEREATIAGGETTQERRFAPALVYLPVRARVNNVLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -