Basic Information

Insect: Sussaba pulchella
Gene Symbol: RREB1
Assembly: GCA_963971145.1
Location: OZ020167.1:16958274-16965780[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.013 1.2 10.2 0.0 1 23 90 112 90 112 0.98

2 15 0.00013 0.012 16.4 0.3 1 23 126 148 126 148 0.98

3 15 2.7e-07 2.5e-05 24.9 1.3 1 23 154 177 154 177 0.98

4 15 0.32 30 5.7 0.5 1 23 274 297 274 298 0.90

5 15 0.085 7.9 7.6 3.0 2 23 304 326 304 326 0.95

6 15 0.079 7.3 7.7 0.1 1 23 517 539 517 539 0.96

7 15 3.4e-05 0.0031 18.3 0.3 1 23 548 570 548 570 0.98

8 15 0.0021 0.2 12.6 2.9 1 23 576 599 576 599 0.97

9 15 0.00054 0.05 14.5 3.0 1 23 1016 1039 1016 1039 0.97

10 15 0.00078 0.072 14.0 0.1 3 23 1323 1343 1321 1343 0.97

11 15 1.1 1e+02 4.1 6.5 1 23 1349 1372 1349 1372 0.97

12 15 0.022 2 9.4 1.8 1 23 1412 1436 1412 1436 0.95

13 15 0.64 59 4.8 3.1 1 23 1602 1625 1602 1625 0.96

14 15 0.013 1.2 10.1 0.4 2 23 1677 1698 1676 1698 0.94

15 15 1.6 1.5e+02 3.6 8.2 1 23 1704 1726 1704 1726 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.013	1.2	10.2	0.0	1	23	90	112	90	112	0.98
2	15	0.00013	0.012	16.4	0.3	1	23	126	148	126	148	0.98
3	15	2.7e-07	2.5e-05	24.9	1.3	1	23	154	177	154	177	0.98
4	15	0.32	30	5.7	0.5	1	23	274	297	274	298	0.90
5	15	0.085	7.9	7.6	3.0	2	23	304	326	304	326	0.95
6	15	0.079	7.3	7.7	0.1	1	23	517	539	517	539	0.96
7	15	3.4e-05	0.0031	18.3	0.3	1	23	548	570	548	570	0.98
8	15	0.0021	0.2	12.6	2.9	1	23	576	599	576	599	0.97
9	15	0.00054	0.05	14.5	3.0	1	23	1016	1039	1016	1039	0.97
10	15	0.00078	0.072	14.0	0.1	3	23	1323	1343	1321	1343	0.97
11	15	1.1	1e+02	4.1	6.5	1	23	1349	1372	1349	1372	0.97
12	15	0.022	2	9.4	1.8	1	23	1412	1436	1412	1436	0.95
13	15	0.64	59	4.8	3.1	1	23	1602	1625	1602	1625	0.96
14	15	0.013	1.2	10.1	0.4	2	23	1677	1698	1676	1698	0.94
15	15	1.6	1.5e+02	3.6	8.2	1	23	1704	1726	1704	1726	0.98

Sequence Information

Coding Sequence: ATGTTTTTGTCGAGAGTACCACAGACCGCACGTTACATCCTTTTTCCCGAAAAATTCAAGAGCGCGACTGCCGGCCAGTGCGCGAGATTGTCCCCGTTTTGGTTATTCGGAATCTCGCCGAGTGTGGATATGGTCAGTGGTCGGGGCTTAGccacgacaacgacaacggcaACAGCTGAGAACGAAGGAACGGAGCATCGACACAGCGGCGATACACAGACAGATGCAGCATCATCGCCACTgGGAGCCGACCAACAGGACGGAACTTATCCCTGTCCAGCCTGTCCGATAATACTGTCGAGCCCTCGCGAGCTGTCGAATCATCTTCGCGGTCACAATTCACCGCGCAGCACCGATTACAGCGGCGAGGACGATTACACGTGCGGCGTTTGTCACAAGGTCCTGAGCTCCGCAAGCTCCCTGGACCGTCACGTTCTCGTACATTCCGGCGAACGTCCCTTCAAGTGCAAATACTGCGACATGGCTTTCACCACGAACGGCAACATGAATCGTCATCTACGAACCGCCCACGGCGGTCTGTCACCCCGTGAAAACAGTTTCACGGATTCCGAAGCGAGCAGCGATTCCGAAAAACCAAACAACAAACGTCGTCACGTCGAGGAAGAATACAACAACAATGAAATCGCCAAAACCGCATCACCGGATTTCATCGAACAACGCGATTCCCCCACTTACGTCGCCAAACGTCGATGTACGGATATGACGGAAATCGACGTtgacaaccaaaaaaaacacaaaattctTCTCGCCAATTCGAGAACCGAAATAACCAACGATATCCTCGAACCACCGAAATCTCACAATTGTCCGGTATGCGGAAAATTAGATTTCGCCACAATTGCCCTTCTCGAATCTCACCTGGAACGTCATCATCCTCAATTCCCAGCGAAATGCGACACCTGCAATCTCTCGTTCAAAAATCATCGTGTCCTGAATCTTCACCGTTTCATGATTCACTACGGTGACAATTCTTACGCCAACAATCCCCGAAATTTCCGCAATTCCGTCGTTGGTTTTCACGATCTGACATTCGTCGATTTCTCATCGGACAAATTTCCCGCCATTGCTCGTGCGGTTTGCGAACAATCTTTGCATCGTCCGGCATCCGGTGAAATCGCGACGTTTCAATGCGCCAAATGTCTTCGGGCGTTTCCTTGTCGTTCGGCTTTGGACGGTCACGAGATGGATTGCGGCGTCGCGAATTTGCAAACCCGCGTTTACGGCGACGATTATTCGCGAAGGGATGATTTTTTCGCGGGTTTGGATCTTCAGAACAAAGCCGCGATGACGGAAGCGAAGGAGGGCAAAGATCTCGCGGACATACAGAGCATAATATCGGTGACTTCGGGACCGATATTGCAAAATTTTCCGCGTTCCGACGCGAGCACGCCGGAACATCAGATTAAAATCAATCCAAACCTAAATTCGTCCGGTTCATCGGGCACTCCTTCGTCGGAATATCATCAGGAGGAAGAAGCTCAGGACGCTTTTGCCGCGGAATTTCGTAAAATGAAGTTGAAAGGTGAATTTCCATGTCGTTTGTGCACCGCAGTTTTTCCCAATCTTCGAGCTCTCAAAGGTCACAATCGCGCTCACATGGGAGTTGGACCGGGTCTACCGTATCCTTGCAACATGTGCCCGTACACGAGTACCGACAAAGCCACCCTGGTGCGTCATCTTCGATCTCACAACGGCGATCGTCCCTTCGAATGTTCACTCTGCAATTACGCTTTCACGACGAAAGCGAATTGCGAAAGACACGTGAGAAATCGTCACGGCAAATTAACCCGCGAAGACATCAAAAGCGTCTTAATTTATCATCCGAGCGAGGATTACACGAACGACGGATCGCTCGAAAGAACGTCACCGCGTGGAAATCGCGAGGATGCTCGAAAAAGTCTCGTTTATCCCAACGAAAGAGACGATTTTCCTCATCAACGATCGATCTACGCGTCAATGACGTTGGAAAACAAACAAGATCTCGGCAACGTCTCCGACGATGGACACGGGCGTTCTATCAACGTCCAAACACCCCGTGGAATTTCTTCTTACGGCCATTACGAAAGATCCGAAAGTTTGTCAAGAACCCCGACCCTCGGTGTTCGTTCGTACGAAATGAAAACCAACAGATTTGCTTTGAATTTCGATCGACCTACGAACGATTTCATCGCGAATTCCGATTACAGCGGTAAATGCGAAGACGACGGAGATTCGAGATCGTCGGACGAAGACGAGAACGTTTCTCTGGTCAGCGATACGAAATCCGATTTTACGCACCAAAGAATCGAATCGAGTCCGATGGATTTGAAGAAATCATCTACGATCGCGAACGTCATCGACGTCGTTGCCGCGGCTACGGGACGCGAAACAACGGTTTCGGCTGTTGGCGACGACGCTCCTCTCGATCTAACCATGGACGTTCTCGATCTGagcaaaaaatcaaaagcCCAATGCACGATAACCGAAACAACCGTGAGTTCCGAAAACATCGGTAgaagtcaaaaaaaatatttcaacgcgacgaatcaattttttctcactcAAGCTTTGTTGGAAGCCGGACAAACGGGTCGTCATGGAAAATCCGTCGAGGCTCTTTACGCCGAGGCTCAATTGTTGTGccaaaaatttgattcttaTCCGGTCAACGATGCAACGGCTACGGTCGTACAGCCTTATCTTTTCGGTCATCCGATGTTCGCTCAAGATTCCACGATTAAAGAAAGATTGCAAAAAGAATTGGTACGAGGATTGCAATTGACGAGCGGTGGAAATTTGGTCGAACCTTCGATCGTTAATACCGCGTTTCCCGGTGCTTATCCACCGGCTCGTGACATTCTCGTCCACACGATGAGCGAACAAGTCGATTACGCCAAAATCATGGCTTCGAAATTGCCCAATCGAATGGTAAGCCctcgtgaaaaaatcgataattcgcAATCGTCGAATTCCGTCAAAATGGTTATAAAAAATGGTGTTTTGATgccaaaacaaaaacaacgaaGATACAGAACCGAAAGACCTTTCACTTGTGAACATTGTTCGGCAAGATTTACATTGAGAAGCAACATGGAAAGACACATAAAACAACAACATCCTCAACATTGGAGCCAAAGACCGAGAGGTGGACACTCGACGAGAGGCAGACCACCGGCTAATCCACCAACGTTGTTGATCAATCACAATAATTCCGGAATGCAACAATTGTCACAAACTTATCCGAACATTCTTCCCAGAATCGGACAAACTTCGACGACTTCGGTATACGAGAAACACGCGATTTCGGATCACGTTAAATACGCAATATTGGCGCAACATTTGAAAGGCAACAAGATGGAGGAAAACGACACGGAGGAAGAATTGATCATCGACGAGAATTCGGCCGAACGTCAAACGAAGAATAACGACAaaacgttggaaaatcaaCGTTCGACGAGTTTGTTGAGAGGAAAACTCGAAAGTGATTTGTACAAGGATAGTGGAAGAAAATCGAAGCAACAACATCAACAGGACAACGTCGagatttcgacgaaaaatagCGCGAAGGACGATGAAGATGGTGATAACGACGATGATTACGACGATGCCGAGGAAGCTGATTGTTCGGCCGATGATTATTCCACGACGAAGATAAAAATCGAACCCGAAGAACGCGAAATTGAGGACGAAAACAAGGAACacggTGCCGTTGATCTTGCCAGTGTATCCGAATTATTGGACAAAGCTTCGCAACAGTATCAACAATTTCAACCTCAATACATGAGCGACGAGGAAGGTCTCGTTGCTTCGACCAGCGATTGCAACAATTCCGGTAGCGATGAAAAATCTGATTCCGTTAATTCGGCAAATTCCGGAAATTCTAATTCGtccaagaagaaaaaaaagaagaagaagaagaagaagaagaagaaatcgGCTTATTCGATGGCTCCTAACCGAGTTATATGTCCGTATTGCGAAAGACCGTTTCCATGGACTTCGTCTCTGAGACGTCACATTCTCACCCACACCGGACAAAAACCTTATCAATGTATGCACTGCTCGCTCCTGTTCACGACCAAATCAAATTGCGATCGTCATCTTCTTCGCAAACACAAGAACAATGCGAATAAAATTCGTCGTATGAGAAATTCGTCGTCACCGGAAGCTCATGAACAACCGACGAACAACAACAGTACCGCTTTTGCCATGAGAAACGTACCCGAGAGACCTTACAAGTGCAATTTGTGTCCTAGTTCGACGTTTTCGACTTTGGGCAATTTGAAGAAGCACAAATCTTCGAAACATTCGCGAGGTTTCAAGTCCAGCAGGCCGGAATCTCCGGTCACGAGCGAGCCGAGGAACAGCCCGGAAGCTTGCAACAAACACAACGATCAGAGCGGTTACGAGAGTCAATCTTCCGGCATGTCGGACAACGTCGAACAAACGGAAAACATGGACGCGATGGAATACGGTGAGATAAATACGTTGGAAAATGTTGATCACGTCAAAGACGTCGAAAGGTCTCAATTCTCAACGAAACTCGAAGCGGTACCGGAAATAATGGAACCCGATGAAACGATTCCCGAGGAAGAACACGCGGAGATTGTTCCGGAAGTGCGACGATCTACGGAAAATCCGGAAACCGCGGAAATCATGGAAACAACGATGGAATCCGTTCAACCGGCGTTGGATGCGGTTGCTTCGAGAATCATCGACAACGCGGCGTCTCTGGCCACGAGCGAAGCTTCGAAATCACGAAGGCCATCGCCGAGATCCTCCCCCGGTCCCAGTGATGCGCCTTTCAAGTGCCATTTGTGCGACAGCGGATTTTCCGAACGTCAAGATTGTCTCGAACACATAAGAATCAATCACACGCGTTCTTACGAGATTCTCGTGGCGAAGGGAGCTCTAGACATGGATATTGAGACTCCGGAGGAACAACAACCGCAACCACTGGCGCCACAACAGCACAGCGATGGCGAGGAGAAACGAGGCAGATTTCCGGATTACAGCAACCGTAAGGTCGTTTGTGCGTTCTGCATGCGTCGTTTCTGGTCGGCCGAGGATCTTCGTCGTCACATGAGAACCCACACGGGTGAGAGACCGTTTTCCTGCGACATTTGTTGCCGACGATTCACCCTGAAGCACAGCATGCTTCGCCATCGCAAGAAACACGAGTCCGTGGACTCGACGATGTACGTCGGCACGAGCGGCGACGAGGAATCCGGACCGTCCCAACCGCCCACGATAACTCCGCGCAGCCAACAGCATCAATCGTCGATGATAAGCGCGACGATCGGTGAGTCGAGAATTCACGAAAGAATTTCTCTGCCGACCGTCGCGACCGTGGCGACGGGCGATGCCGCACCCTCCGGTTTGATGCGATTCAATCCTTACGAAAAACTCGCTACTCTTACCGGTAAATTGTCGAACGCTCagcaaaatttcaattgtcaAGACGGTGGCGATAACGAGAACGATTTAATCTCGAATCTTCTCGGTATACGCGACAAAAGCATCATCGACAAGGTGCTCCAAGCATCGGCCGATGACGCGGCTAAACTTCTCGGCGTTAATCGTAACAATGactga
Protein Sequence: MFLSRVPQTARYILFPEKFKSATAGQCARLSPFWLFGISPSVDMVSGRGLATTTTTATAENEGTEHRHSGDTQTDAASSPLGADQQDGTYPCPACPIILSSPRELSNHLRGHNSPRSTDYSGEDDYTCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGLSPRENSFTDSEASSDSEKPNNKRRHVEEEYNNNEIAKTASPDFIEQRDSPTYVAKRRCTDMTEIDVDNQKKHKILLANSRTEITNDILEPPKSHNCPVCGKLDFATIALLESHLERHHPQFPAKCDTCNLSFKNHRVLNLHRFMIHYGDNSYANNPRNFRNSVVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIATFQCAKCLRAFPCRSALDGHEMDCGVANLQTRVYGDDYSRRDDFFAGLDLQNKAAMTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKINPNLNSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGLPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDYTNDGSLERTSPRGNREDARKSLVYPNERDDFPHQRSIYASMTLENKQDLGNVSDDGHGRSINVQTPRGISSYGHYERSESLSRTPTLGVRSYEMKTNRFALNFDRPTNDFIANSDYSGKCEDDGDSRSSDEDENVSLVSDTKSDFTHQRIESSPMDLKKSSTIANVIDVVAAATGRETTVSAVGDDAPLDLTMDVLDLSKKSKAQCTITETTVSSENIGRSQKKYFNATNQFFLTQALLEAGQTGRHGKSVEALYAEAQLLCQKFDSYPVNDATATVVQPYLFGHPMFAQDSTIKERLQKELVRGLQLTSGGNLVEPSIVNTAFPGAYPPARDILVHTMSEQVDYAKIMASKLPNRMVSPREKIDNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLINHNNSGMQQLSQTYPNILPRIGQTSTTSVYEKHAISDHVKYAILAQHLKGNKMEENDTEEELIIDENSAERQTKNNDKTLENQRSTSLLRGKLESDLYKDSGRKSKQQHQQDNVEISTKNSAKDDEDGDNDDDYDDAEEADCSADDYSTTKIKIEPEEREIEDENKEHGAVDLASVSELLDKASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGNSNSSKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAHEQPTNNNSTAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSSRPESPVTSEPRNSPEACNKHNDQSGYESQSSGMSDNVEQTENMDAMEYGEINTLENVDHVKDVERSQFSTKLEAVPEIMEPDETIPEEEHAEIVPEVRRSTENPETAEIMETTMESVQPALDAVASRIIDNAASLATSEASKSRRPSPRSSPGPSDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQPQPLAPQQHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESGPSQPPTITPRSQQHQSSMISATIGESRIHERISLPTVATVATGDAAPSGLMRFNPYEKLATLTGKLSNAQQNFNCQDGGDNENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -