Spul009683.1
Basic Information
- Insect
- Sussaba pulchella
- Gene Symbol
- -
- Assembly
- GCA_963971145.1
- Location
- OZ020167.1:14297273-14313895[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 8.1e-06 0.00075 20.2 1.0 1 23 224 246 224 246 0.98 2 30 0.0035 0.32 11.9 1.9 1 23 269 292 269 292 0.96 3 30 0.00026 0.024 15.5 0.5 2 23 299 321 298 321 0.96 4 30 0.00028 0.026 15.4 0.4 1 21 341 361 341 362 0.95 5 30 0.0018 0.17 12.8 0.3 2 23 459 480 458 480 0.96 6 30 0.00029 0.027 15.3 0.2 1 23 486 509 486 509 0.97 7 30 0.00015 0.014 16.2 0.1 1 23 569 592 569 592 0.96 8 30 0.01 0.96 10.4 0.4 1 23 598 621 598 621 0.96 9 30 0.19 18 6.5 1.9 1 23 634 656 634 656 0.97 10 30 4.6e-05 0.0043 17.8 0.9 3 23 701 722 700 722 0.96 11 30 0.048 4.5 8.3 0.9 2 23 786 809 785 809 0.93 12 30 7.2 6.7e+02 1.5 0.0 2 23 818 840 818 840 0.83 13 30 0.017 1.6 9.8 0.1 2 23 847 869 846 869 0.95 14 30 3e-05 0.0028 18.4 1.2 1 23 877 899 877 899 0.98 15 30 0.25 23 6.1 1.2 2 23 935 958 934 958 0.91 16 30 0.00027 0.025 15.4 3.3 1 23 961 984 961 984 0.97 17 30 0.022 2.1 9.4 0.8 2 23 991 1013 990 1013 0.96 18 30 0.00047 0.044 14.7 3.7 1 21 1040 1060 1040 1061 0.96 19 30 0.0035 0.32 11.9 1.8 2 23 1075 1096 1074 1097 0.93 20 30 0.1 9.3 7.3 0.9 1 23 1100 1123 1100 1123 0.95 21 30 0.012 1.1 10.2 1.1 2 23 1130 1153 1129 1153 0.92 22 30 3.9 3.7e+02 2.3 0.2 2 23 1161 1183 1161 1183 0.94 23 30 0.29 27 5.9 2.7 2 23 1221 1243 1221 1243 0.96 24 30 6.4 6e+02 1.6 1.0 2 23 1249 1271 1249 1271 0.90 25 30 0.22 20 6.3 0.1 1 23 1328 1351 1328 1351 0.92 26 30 0.00016 0.015 16.1 2.0 1 21 1379 1399 1379 1400 0.95 27 30 0.17 16 6.6 1.2 2 23 1503 1525 1502 1525 0.94 28 30 0.19 17 6.5 0.5 2 23 1532 1554 1531 1554 0.96 29 30 0.9 83 4.3 2.5 1 23 1565 1587 1565 1587 0.97 30 30 0.11 11 7.2 0.1 3 20 1596 1613 1596 1615 0.95
Sequence Information
- Coding Sequence
- ATGGAGACGAAGGAACGTTACGACGAGCTCTGCAGGCTCTGCGCCTCTTACGATGCCGTGAAAATGAATATATTCGGAAAGGAGGGCAAGAATCGTCAGCTCGTTGACAAGATACAGACTTGTCTACCGTTCAGaATCGACGAAGATGACAGACTGCCAAAATGTCTGTGTTACAGATGCATGtacaatttggaaaatttttacgaCTTCAGAACGGCTTGCGTTAACGCGGTTGCGTTATTGGAAAGGTGTTTGCCGCCGGGTATCAATGCAGCAGACAGCGAAGTACAAAATGACGTCGAGAATTATTCGGAATTGCGAACGGAGCTTCTCAAAGAGAAGGAAAAGATGCCTATTCTGATACCCGAGGCACCCATTGTGAATCCAAACGCGGCGTTGGGCACGCCACCGAGGTTGAACAGCGACGGCGAAGCCGATCAGGAGATCGAGGAGATTCTCGACGCCAGTGGAACCGAGGATGGTTTCGAGGATACGGAAGACCGGAAGTCGGACGAATACGAGATGGACATGGAGACGAATCCCAgtgattttttggaaatgacGCCAATGGTTACCGAAGAATTGGACGATAACGAACCGGTTAAAACCCCGAAGACCGAAATACGAAACAACGACGTTTTTCAACACACGGCCGAACAGCACGAGGTTTACGTTTGTTCGTTGTGCAACAAAGCGTTCAGTTCGAAAGGCCATTTGTCGTTACACGCGAGGATTCACGTGGGCGCGGGCGACGTTATCGGCGCAAAAGTCGTCACGGACGATCACACGTCGTACAAGAGACCGTATCAGTGCGATTTGTGTAACAAATCGTATTCGACCGCGAAGCATCGATGGGGTCACGTCTCGACGACTCACAGGGGCCATCCAGCCGTGACTTGTGCCTACTGTTCGCGAATATATTCGACGCGAACGAATCTCGAGGAACACATAAAATCGAGGCACACGGGTTTGCCACCGCCTCCGGAATTGCCGATTCCCTATGTGCAACCCGACAATCGTTACAAATGCAAAACTTGTCCGAAAATGTATACAACGATCACGGAATTGAACAAACACGGAAGAGTTTGCACGGGCGATCGTACGAAGgtcaaaacgaacaaaaaagtttcgcggaaaaataaaaatttgatggaCACGTCGGATCTCTCGAGCACGGATACCGACATAGATGGCAAGGATTATAGAAATGCCGAGGctaaattgtcgaaaaatccGCAATTAACGATATTGAAACAGGCGCTTACGAAAGGCGAAACTTCGAAGCGCGATTACGATGACAgaaattcgtcgaattatAAACTCGTTGAGCTATCGAAGACGGACGTAAACGATGGCGACGGTCAGAAGCGATGGTACTGCGAGACTTGTCCCCAAAATTTTTCGTCGGTAGAAAATTTGAAGGATCACGAGACTACCCACGACGCCGAAAGGCCGTACATATGTGTGCtatgcgaaaaagattttGTCGTTAAATCATCGTTGAGCCGGCACATAATGTCGTCCCACGGTGTTGATCCGAGTCCAATAATAGACAGCGAcaagtgtttgaaaaaaagcgTATTGTCGCAATCGTGGACGAGACAATTGATTAAAACGGAACCGAAAAAAACGGGCCGAGACGGTTCGTTATCGTCGGAAGACGGTGAAAGCGCTCATGGAAATATGATCGAAATCGAGACCGTATTCGTTTGTGAAATTTGCACCCGTGATTTCAACGATCGGGCCTCGTTGTGGCTTCACATAAGAGCGACGCACAAAGAATGCGCGGCATTCGCTTGCGGGGTTTGTCTTAAAATTTGTTCGGACAACGCGCAATTGTTGAATCACGTTAATATGTATCACGGTGGATCGAAATTGTTGATATCGGAACAGAGACGTTACAGTTGCACGATATGCGGCAGACAGCacgattcgagaaaaaaattaatgacccACGTGTCCATACACAACGTCGATCCCGGTTACGATCCCGCGAGTTTCGTTCAATTGAACAGCAATTATtacaacgaaaacgttaacagCAACGAAACGAACGAGGCGCTTATGGATTTCGACGTCGAGGACGGCGACAAGGTCGATTGTTACATATGTTACAAATCTTTTCCCAACGAGGATCATCTAATTCGGCATCAACGAAATGCCCACAAGTCCGAGCCTGTGATACCGAGCGGCGCCGATGTTTTGCCAGCCAGCAACGGTTCGGGCACGGGACCCAACGGCACCAAAGCCCAATATCACCTGTTCTTCGTTTGCGAATTGTGCGGCAGTTCGCATCCGAGCAAATGGGAACGTTGGCTTCACGTCAGCAGCAATCACAGCGAAGAATCATCGATAAGATGCGAACGCGAAGATTGTGGAAAAATCTTTGCCACAAAAACATTGCGAAACGATCACGCTCAGCATCATCTTATTCAAGGTTCATCCCCTAACACTTGCGAggtttgcggaaaattatGGGGAAGTCGAGTCGATTATTGGAAACACGTAATGGGTGTTCATTCCGACACCGTTCCCTTGATCTGCGGTGTTTGTCTAAAAGTATTTCCCGACGTGAAAAAACTCAGCAATCACGTAAAAACCAATCATTGGCCATTGACGAACGGTGATTTCAGTTGCGACGTTTGCGGTCGTCCTTATTCGAACAAATCAAAAATGTCGCGTCATCGAAAAATTCACGGTTTAGAAATTGACAATGCAACAACGAACAACGGAACCAACGATATTTCCAACAACGATTCTTCGATCCACGAAAAATCCGCTCCGACCACGGAAACCGAATTAACGTGCGAATTGTGCACAGATTTGATTTTCTACAATTGGGAAAGTCTTTGCAATCATCGTCGTTCGTTGCACGGTTTGTTCCCGTGCGATTTGTGCAACAAATGTTACGGTCGTACGTCGCATCTTTGGAAACACGTTAATCGCGTTCACAAAGGTCACAAAGACGTGACTTGTCGTTATTGCATGAAAACAAGCGCTTCGAAGGATCATTTGGCCGCTCATATATCGAAGATTCATCGTTACGAACCTTACgacaaaatcgaaatttccgaATCTCCGAGTTTCAAACGAACAACGATCGAAGACGACGGTGTACATCAATGCGACAAATGTAACAAAGGTTTTCACAAACGTTATTTGTTGCGTCGTCACATGAAAGGTTGTCAAAATTATCGCAAAGATCCCGGTGCTTTGTTGACCCGTTGTCGGGCTTgcgaaagaattttcaaagATCGCGCGAGTTTGCAAAAACACATTGAAAATCATCACAGTTCTTACACGTGTCATCTTTGCGACGAAACTGTGACGTCGAAACTCGGCATAATGACGCACAATCGCGTGAATCACATGGATCATCCAGATTTAACTTGCAACGATGATtcgtgtaaaaaattatttcgcacCAAAGAAGATCTCGAATCTCATCGAAAGGATCACAAATATCACAACGCTCCGAACGTTTGTGATTTTTGCGGTGACAcggtggaaaataaattaaaattaaaaatgcacGTGTTGTCGTTGCACAGAAACGAAATTGGCGTATCTTGCGGTGTTTGTTTGATACCCATGAAAGAtccgaaaattttgaaaaaacacgtCGAGGACGAGCACACCGGTGTTCTTTTGAAACCGAATACCTGTCAAGTTTGTGGTAAACAATACGCTTCGAAATGGAAAGCTTTCGATCATACGAAAAAATGTCACGGTAAAGTTTTTCGTACTTGCAAACAATGTTTAGCCGTTTTTACAACCGACACCGACATACGTTATCATTACGAGCACATACACAACGTTCCGAAGGATCAATTGGCCGGttttgaaaaacgttttcgcaTGAGAACCGACGATTACGAAAATTCCGACGTCGTCGTTAAAGAAGAACCCGAAgattacgattacgacgatGGTATTTGCGACGACGAATCTTACGATTACaaaagacgaagaaacgaCACTTACGATTGTGACATTTgtcccgaaatttttttgaatcgtgaaaCATTGTCGGATCATTATACGAACGTACACAACAAAGATCCACAAaagatgtttaaaaaaataaaatacgatggCACGTGTACGAAACGTAAAATGcgaaatcgtgaaaatttcgaatgtAAAAATTGTGGTAAACAATTTTGTACCAAAACGTTATTTTGGAATCACATAAACGTTTGTACGAGACGCAACAACGCGTGCAATCGCGACGACGAAACGAGATTACCAACGTCGATTCTCGAAGCTCATCTCAAgaacaacaataaaataaaaaaagaacctTTCGACGATGAAACACCGttgaacgataataatttgaacATACCGGATTTCAATCTCTTCGAGGACATAAATATGCAATTGTCGGAACAAAAACCAGTACCCAATCTAATGCCATTGTCGCAGATACGTCATTTGAACAGTATGAAATGTTCGAGAAAAGATTCTCGTAAAGTTTACGACGAATCGACGAATACGGTTTGCACGTGTGAGGTTTGCGGCAAACCATGGCCGGCTAAAAAACATTTGTGGCAACATTTGATAAGATTTCATCGTGCCGAAGCCGCGGTGACTTGCGGAGTTTGTCTCAAACTTTGCTCTAATTACGAAGAATTagcgattcatttgaaatccACTCACGAATCTATATTAACGTGCGAAGGCAATAATTTTACTTGCAAAACTTGCGGACGTTATCACAACGCTCGTAGCAAATTGTTGTTACACATGAGTATACACATAAACAGCAATGGAATAGCTTGGTGTCCGAAATGCGAGCAATCATTCGAGAGCGATGAAAAATTGACGGAACATTTGGAAAATTGCGTGAAACGACAACCCGATTACGAAGATCGTAGTATCGACAACGAAGATTCGAAAcacgatgacgacgacaagGGTAGTTTGATCGGTGACGCGGATTTTTCGGATCATCGTCCGAGCAATTCGGAAAATACCGAAGATTCCGAAAGCAGCAGCGCCGAAAGTGCGAGCGATGACGATGAGAATCCGATCAAACACGAGGATGAATCGAGAACGAACAGTCGTGCGACTGTTGACAGAAGTTGTCGTTCGGAAACCGACGAAGAAGCAGATTCGGACGACGAAGACGTTGTTATcgaggaaaaagaaatcgCGCGATTGAACAAGATGGAAACTTCGGAAAATATCGAGGAAAAACGGGTTGATGAGACGTCGAAGCGCGACGATGAAGACGAAgatgaagacgacgacgacgaagaagacgacgtGGACGACGTGGACGACGTTGAGAACGTTGAAGAGGAAAAAGAATCTGGAATTTCGGCGAATGATACcaaagataaaaacaattgcgacgagaaaacgaaaaatcccacGATCGAGGACGATTCGGACGACGACGGCCCGCCCGTATTAAGCCCGGTCATGCCATTGTCGGTCGAACACGAGACCGAGGAAACCGACGACGTCGTCGGTCACAAACTAAGTCCGATGATACCCATCGAACCGAAAATCCTCGACATAACCCAAACAACGAACGAAACCCCAACAAAATTGCGACGAATCGACGACGAAATGAACAACCCGACGTATTCCGACGTCGAAGTTCATCCGGTAAATGAGAAAATTCCGTTGGAAGATTACGAAACGGACGAGGAAGAAGCCGATGGCGAATTGAACGAAGACGTTCGTGACGAAATTGACGACGAGGATAGTCGAATTCACGTGGTTAATCCGAACGACGAGTATCATTCGGACGATAACGGAGGTACCGACGAATCGGCGGCCGAGGACGAGCAACCGTTCGACGAGGAACAATCGGAAATGGAAGTCGGTGAGGATGAGGATGAGGAGGAGAACGAGGATGAGGATGATAATGGCGTGGAGATACACAATTTGAACGGAACTGTGCTAATGGTTGCCAAAGATGCTGATGGAAATCAGATATTGattcaaaaaaacgtttccgaCATCGTTAACGGGGATTCCATGGAAGCCGTGACGGGTTTTATTTACGAGGACGAAACGGATTTCGAGGAATTGCGGGGATTTCAGGTTGAGCATGAGGGTAGCGATCACGAGGCGATggaagaggaggaagaagtgcaggaagaggaggaggaagaagaaggggaagggaaggaggaggaggaggaggaggatgaggaggaagggaaggaggaggagggagAGGAAGGGGAAGAGCAAGAGCAGGAAAAGGAGGAGGAGGgagaggaggaagaagaagagcaGGAGGAGGACGAGGAAGCTGCCTCAGGGAATGAGAAAAATGGCCAAGAGGACGAAGCGATGGAGGAGGGAGTTTTGGAAGGGTCGAAGGAGGTTCAGGACGACGAACGAGAGGAGTTGAGCGATCGCGAGGGAGCAAGCGATCGCGAAGAAGAGGAAGGAAAGGAAGAAGTCGATGAGGAGGAAGtggaagaggaggaggaggaggaggaagaagaaggaggaggagatGGTGAAGGGGAGGAGTGTGATGTACAGGATTCTAATACGAGTGCCAAAAGCGATGTGTCAAGGACGTAG
- Protein Sequence
- METKERYDELCRLCASYDAVKMNIFGKEGKNRQLVDKIQTCLPFRIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGINAADSEVQNDVENYSELRTELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILDASGTEDGFEDTEDRKSDEYEMDMETNPSDFLEMTPMVTEELDDNEPVKTPKTEIRNNDVFQHTAEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPIPYVQPDNRYKCKTCPKMYTTITELNKHGRVCTGDRTKVKTNKKVSRKNKNLMDTSDLSSTDTDIDGKDYRNAEAKLSKNPQLTILKQALTKGETSKRDYDDRNSSNYKLVELSKTDVNDGDGQKRWYCETCPQNFSSVENLKDHETTHDAERPYICVLCEKDFVVKSSLSRHIMSSHGVDPSPIIDSDKCLKKSVLSQSWTRQLIKTEPKKTGRDGSLSSEDGESAHGNMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPGYDPASFVQLNSNYYNENVNSNETNEALMDFDVEDGDKVDCYICYKSFPNEDHLIRHQRNAHKSEPVIPSGADVLPASNGSGTGPNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSEESSIRCEREDCGKIFATKTLRNDHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVKKLSNHVKTNHWPLTNGDFSCDVCGRPYSNKSKMSRHRKIHGLEIDNATTNNGTNDISNNDSSIHEKSAPTTETELTCELCTDLIFYNWESLCNHRRSLHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLAAHISKIHRYEPYDKIEISESPSFKRTTIEDDGVHQCDKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETVTSKLGIMTHNRVNHMDHPDLTCNDDSCKKLFRTKEDLESHRKDHKYHNAPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKILKKHVEDEHTGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDTDIRYHYEHIHNVPKDQLAGFEKRFRMRTDDYENSDVVVKEEPEDYDYDDGICDDESYDYKRRRNDTYDCDICPEIFLNRETLSDHYTNVHNKDPQKMFKKIKYDGTCTKRKMRNRENFECKNCGKQFCTKTLFWNHINVCTRRNNACNRDDETRLPTSILEAHLKNNNKIKKEPFDDETPLNDNNLNIPDFNLFEDINMQLSEQKPVPNLMPLSQIRHLNSMKCSRKDSRKVYDESTNTVCTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSNYEELAIHLKSTHESILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINSNGIAWCPKCEQSFESDEKLTEHLENCVKRQPDYEDRSIDNEDSKHDDDDKGSLIGDADFSDHRPSNSENTEDSESSSAESASDDDENPIKHEDESRTNSRATVDRSCRSETDEEADSDDEDVVIEEKEIARLNKMETSENIEEKRVDETSKRDDEDEDEDDDDEEDDVDDVDDVENVEEEKESGISANDTKDKNNCDEKTKNPTIEDDSDDDGPPVLSPVMPLSVEHETEETDDVVGHKLSPMIPIEPKILDITQTTNETPTKLRRIDDEMNNPTYSDVEVHPVNEKIPLEDYETDEEEADGELNEDVRDEIDDEDSRIHVVNPNDEYHSDDNGGTDESAAEDEQPFDEEQSEMEVGEDEDEEENEDEDDNGVEIHNLNGTVLMVAKDADGNQILIQKNVSDIVNGDSMEAVTGFIYEDETDFEELRGFQVEHEGSDHEAMEEEEEVQEEEEEEEGEGKEEEEEEDEEEGKEEEGEEGEEQEQEKEEEGEEEEEEQEEDEEAASGNEKNGQEDEAMEEGVLEGSKEVQDDEREELSDREGASDREEEEGKEEVDEEEVEEEEEEEEEEGGGDGEGEECDVQDSNTSAKSDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -