Basic Information

Gene Symbol
ZNF711
Assembly
GCA_963971145.1
Location
OZ020170.1:12874718-12877940[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00013 0.012 16.4 1.6 1 23 88 110 88 110 0.98
2 19 9.7e-05 0.009 16.8 3.7 1 23 121 143 121 143 0.97
3 19 3.4e-06 0.00032 21.4 1.1 1 23 149 171 149 171 0.97
4 19 0.00023 0.022 15.6 0.7 1 23 176 199 176 199 0.98
5 19 0.002 0.18 12.7 1.4 1 20 205 224 205 227 0.93
6 19 0.00089 0.083 13.8 0.4 1 23 233 256 233 256 0.97
7 19 0.00032 0.03 15.2 1.2 2 23 267 288 266 288 0.92
8 19 1.1e-05 0.00098 19.9 3.8 1 23 292 314 292 314 0.96
9 19 3.7e-06 0.00034 21.3 0.2 1 23 320 342 320 342 0.99
10 19 1e-05 0.00095 19.9 1.6 1 23 348 370 348 370 0.99
11 19 5.2e-05 0.0048 17.7 0.1 2 23 619 640 618 640 0.96
12 19 3.8e-06 0.00035 21.3 1.1 1 23 646 668 646 668 0.97
13 19 0.11 10 7.2 0.8 1 23 673 696 673 696 0.96
14 19 0.00032 0.029 15.2 0.8 1 23 702 724 702 724 0.97
15 19 0.013 1.2 10.1 0.2 1 23 730 753 730 753 0.95
16 19 0.0038 0.35 11.8 0.5 1 23 764 786 764 786 0.88
17 19 5.9e-06 0.00054 20.7 1.1 1 23 790 812 790 812 0.98
18 19 2.3e-06 0.00021 21.9 0.6 1 23 818 840 818 840 0.98
19 19 1.2e-05 0.0011 19.7 1.6 1 23 846 868 846 868 0.96

Sequence Information

Coding Sequence
ATGGACTCTGTCGGCTATGTTGTGACCGTCGACTCGCATTTCCACGTAGAATCTTTAGCTCGAGCTGGATTTTTATCGAGGAACATCAAGAACGAGCCGTCAACGGACGATGATTACATCACGGACGATTCGCGCGATATCATACCCGAGACCGATCCTTTGGACATCGAATCGATCTCTCGTCCaaattccgtcgataattctcCCGATAACGATTTcacaaaatccaaaaaaaattcttccaaaCGTTCGCACGTCCGTTACGACTGCAAAATCTGCGTTCTAACGTTCAATCGTAAAGCTCGTTACGAGCGACACATGAACAAACACAATCGcgcgaaaaaaacggaaattacaAATTTCAATTGCGAAAAGTGCAACGAAAAATTTACCCGTAAATCCGCTTACATGCGTCACACTTACAAACACACGACGGAAAAACCTCACAAGTGCAAAGTATGCGGTCGTGGTTTCAAAAGATCTTACGAAGTAACCGCTCACATGGACATACACGGTGGACCAAAATACGTTTGTGAAATTTGCAATTTCACAACGGCTTACAAAGTTTCCCTCAGAACTCACACGCGTCGCGTGCATCAAAAAGATTTTCCTCACAAATGTGACAAGTGCGAAAAAGGTTTCATGTCGAAATACGAATTGGACGATCACATGCCGTCCCACGATGGCACGAAAAGTTTCATCTGCGAATTGTGCGGCAACGCTTATTCCCAAAAAACTTATTTGCTATATCACAAACGCGTTATTCACGGTGTTTACAATCGTGCACCGAAAGAATTGAAATGCGACGTTTGCGAAAAAACTTTTGCCACGGaatattgtttgaaaaatcacgTTGGTTTGCACACGCAAAAATTTTTGTGCTCTCATTGCGGCAAAGAATTCGCGACTAATCATTCGTTGAAATTGCACGTTAGAATGCACACGGGTGAACGTCCGTACAAGTGCGACGTTTGTGAGAAAGGTTTTTCACGATCTAACGCTTTGGCGGTTCACCGACTCACCCACACCGGCGAACGTCCTTACGTTTGCGATTTGTGCGACAAAAATTTTACCCAACGCACGACGATGATGGCGCACAGGAGAAAACATCCGGGAAAACATCCTCCCCCGCCACCGACGCATCTAGCGAAAACCGAAAACGTCGTCGGGGATTCGCGATCgtACATTCCGCCGGACCCACTGGGGCCCGATTATCTGACGGTAAAGATAATGGACGATTTCTTTCGCATTCCAAAATCTCTGTGCTACTTCATGGTCAAACATCCGCCATCGGACAATGCATTTGCTCCCGATTTGACGtcgataaagaagaaaaataacatcgaggatttgaaaaaatcatcgaaaacgaagGCTACGAAGATCGAAGACGACGAAACAATCGTCGACGAATcatcggcgaaaaaaaaatccatcaacgATGAGCAAGATGATAAACCGGAAAAGTGCGTCTCATCGACGAAAATATGTGAATCGTTGTCTGCAAGAGCGACGGAATTATCGAGTGACCAGAAAACTCCGTTGGAAACgtcaagaacgaaaaaaaaaaatcgtgaaaaacgaatcaaaggtaaaataaaatcctcAACGATCAaagaatcgaagaaaattgcGAAAGTAACGATCAACGAATCGTTCACGAACGATTCGTcgacgaccgaaaaaaatgcgaCTAACGTCGCGACGGAATCAACGAATTCCATCGAATCttcgacgaaagaaaaattcgaaaaaatttcttcgtacAAAGAAAACGCGGATTTGGACGATGTTCCGTTGACGTTGCGCGATAAAAAAACCTTAAAAACcccggaaagaaaaaaagaaccggTCGAGTGCGAAGCTTGCGGTCAAACCTTCGCCATGAAGAGCCAATTGAAAGTTCACATGATCAATCACAGTACCGTCAAAGCTTACAAATGCGAAATATGCAATTCCACCTTCAAACGAAAATCCGCTCTCAACACGCATTTGGAACTTCATCGAggattaaaattcaattgcgACGAGTGTAATTTCGTCGGTTCGACGAAAATATCCCTGAGATTTCACGTAAGACGAATGCACAGAAAAGATTTTCGTTACAAATGCGACGAAtgcggaaaaaattatatgtcaaaTTTCGAACTCGTAGATCACAAAACCTCGCATCTCGGTCAAAAAACTTTTATATGCGAATTTTGCGGCAAAgcttatttgaaaaaatccgcTTTGGGAGCGCACAAAAGATTGGTGCACGGTGTTGTGcttagaaaattgaaaaaagattatCATTGCAAATTGTGCGACAAAAGTTTCACGTCCGAATGGATATTGGAAAATCACGCTGGTATACATTCGCGTAAATTCATGTGTACTCAGTGCGGTAAAGAATTTGCGAAAAATAGCAGTTTACAATTGCACAATCGCATGCACACGGGTGAACGTCCGTTTCCGTGCAAACATTGCGATAAATCGTTTGCCAGATCGAACGCTTTGGCGGTTCACGAATTGACTCACAGCGGGCAGAGACCTTATTTGTGCGATCTTTGTGGAAAAAGTTTTACTCAACGAACGACGATGATGGTTCACCGGAAAACGCATCCGGGAAATCATCCGCCACCGCCGAGAACTTCGTTGGTGCAATTGGTGGGAGGTCATGGGGATTCGAAGACGTAG
Protein Sequence
MDSVGYVVTVDSHFHVESLARAGFLSRNIKNEPSTDDDYITDDSRDIIPETDPLDIESISRPNSVDNSPDNDFTKSKKNSSKRSHVRYDCKICVLTFNRKARYERHMNKHNRAKKTEITNFNCEKCNEKFTRKSAYMRHTYKHTTEKPHKCKVCGRGFKRSYEVTAHMDIHGGPKYVCEICNFTTAYKVSLRTHTRRVHQKDFPHKCDKCEKGFMSKYELDDHMPSHDGTKSFICELCGNAYSQKTYLLYHKRVIHGVYNRAPKELKCDVCEKTFATEYCLKNHVGLHTQKFLCSHCGKEFATNHSLKLHVRMHTGERPYKCDVCEKGFSRSNALAVHRLTHTGERPYVCDLCDKNFTQRTTMMAHRRKHPGKHPPPPPTHLAKTENVVGDSRSYIPPDPLGPDYLTVKIMDDFFRIPKSLCYFMVKHPPSDNAFAPDLTSIKKKNNIEDLKKSSKTKATKIEDDETIVDESSAKKKSINDEQDDKPEKCVSSTKICESLSARATELSSDQKTPLETSRTKKKNREKRIKGKIKSSTIKESKKIAKVTINESFTNDSSTTEKNATNVATESTNSIESSTKEKFEKISSYKENADLDDVPLTLRDKKTLKTPERKKEPVECEACGQTFAMKSQLKVHMINHSTVKAYKCEICNSTFKRKSALNTHLELHRGLKFNCDECNFVGSTKISLRFHVRRMHRKDFRYKCDECGKNYMSNFELVDHKTSHLGQKTFICEFCGKAYLKKSALGAHKRLVHGVVLRKLKKDYHCKLCDKSFTSEWILENHAGIHSRKFMCTQCGKEFAKNSSLQLHNRMHTGERPFPCKHCDKSFARSNALAVHELTHSGQRPYLCDLCGKSFTQRTTMMVHRKTHPGNHPPPPRTSLVQLVGGHGDSKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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