Basic Information

Insect: Sussaba pulchella
Gene Symbol: -
Assembly: GCA_963971145.1
Location: OZ020173.1:8940177-8951658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00011 0.0098 16.7 1.4 1 23 470 492 470 492 0.96

2 18 7.4e-06 0.00069 20.3 2.2 1 20 498 517 498 520 0.94

3 18 3.5e-05 0.0032 18.2 0.7 1 23 526 548 526 548 0.98

4 18 8.5e-05 0.0079 17.0 4.4 1 21 554 574 554 576 0.95

5 18 2.6e-05 0.0024 18.6 4.6 1 23 582 604 582 604 0.99

6 18 2.6e-05 0.0024 18.6 5.3 1 23 610 632 610 632 0.97

7 18 1e-05 0.00093 19.9 7.1 1 23 638 660 638 660 0.97

8 18 9.8e-08 9.1e-06 26.2 2.7 1 23 666 688 666 688 0.98

9 18 7.2e-05 0.0067 17.2 6.7 1 23 694 716 694 716 0.97

10 18 2.2e-05 0.0021 18.8 5.8 1 23 722 744 722 744 0.98

11 18 6e-07 5.5e-05 23.8 2.9 1 23 750 772 750 772 0.98

12 18 8.9e-06 0.00082 20.1 7.8 1 23 778 800 778 800 0.98

13 18 2.8e-05 0.0026 18.5 9.1 1 23 806 828 806 828 0.98

14 18 3.7e-05 0.0034 18.2 7.5 1 23 834 856 834 856 0.98

15 18 0.00069 0.064 14.1 8.9 1 21 862 882 862 884 0.94

16 18 1.3e-05 0.0012 19.5 0.4 1 23 890 912 890 912 0.98

17 18 0.032 3 8.9 4.5 1 23 922 944 922 944 0.98

18 18 5.2e-07 4.8e-05 24.0 1.3 1 23 950 972 950 972 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00011	0.0098	16.7	1.4	1	23	470	492	470	492	0.96
2	18	7.4e-06	0.00069	20.3	2.2	1	20	498	517	498	520	0.94
3	18	3.5e-05	0.0032	18.2	0.7	1	23	526	548	526	548	0.98
4	18	8.5e-05	0.0079	17.0	4.4	1	21	554	574	554	576	0.95
5	18	2.6e-05	0.0024	18.6	4.6	1	23	582	604	582	604	0.99
6	18	2.6e-05	0.0024	18.6	5.3	1	23	610	632	610	632	0.97
7	18	1e-05	0.00093	19.9	7.1	1	23	638	660	638	660	0.97
8	18	9.8e-08	9.1e-06	26.2	2.7	1	23	666	688	666	688	0.98
9	18	7.2e-05	0.0067	17.2	6.7	1	23	694	716	694	716	0.97
10	18	2.2e-05	0.0021	18.8	5.8	1	23	722	744	722	744	0.98
11	18	6e-07	5.5e-05	23.8	2.9	1	23	750	772	750	772	0.98
12	18	8.9e-06	0.00082	20.1	7.8	1	23	778	800	778	800	0.98
13	18	2.8e-05	0.0026	18.5	9.1	1	23	806	828	806	828	0.98
14	18	3.7e-05	0.0034	18.2	7.5	1	23	834	856	834	856	0.98
15	18	0.00069	0.064	14.1	8.9	1	21	862	882	862	884	0.94
16	18	1.3e-05	0.0012	19.5	0.4	1	23	890	912	890	912	0.98
17	18	0.032	3	8.9	4.5	1	23	922	944	922	944	0.98
18	18	5.2e-07	4.8e-05	24.0	1.3	1	23	950	972	950	972	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAACAGCATGCTTTGCCAGCTACGACGCAGGCACAGCAAGagGAAGTAAACAGTGGTCGTCCTTCGTATCCCGGGAGTTTGGCTAGTTCGGGCAGTGTCGCACAATTAGGAAGTGCGCCGCACACGTCGGCCGAGCACCTTCGCGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTATTTCCCGGACCGATACCCCAGGTCTCGGTCTATCACCATCCGCACTCCTCCCAGAGGAGCGCCTCGAGCAGTTCCGCCGGCGAAGTAATTGCCAAGGATTCAGGCTCGTCGTCTCTGTCGCATGAGATGGCACTTGCCTCTGGCAATCATCATCCGAATACTTCTTCGcagcatcatcatcaccatcaGAGCTCCGTTAACGCAGGAAGCAGCGCCATACCCAACAGTCATCACGGTTCGATCCAGACGAGCTCGCAGATTCCAGTGTCTCTACCTGGCCTCAATTTAGACGGAACCCACATACCTGCGAGCCACTTGCAGGCAGCACACGCACAGATGCAGCAACAGATGCAatcgcaacagcagcagcagcaacagctgcaccagcagcagcagcaacagcagcaacaacaacaacaacagcaacaacagcaacaacaacaacaacaacaacagcaacaacaacagcagcaacaacaacaacaaccacAGCAATCGCATCATCGGATGCAGAATCATCAGAATCCTCAGAACAATGGACCAAACCCGCAAAATCAAAATACCCAACGGGACGATAACAAAGTTAAGGACGAAGGCGGTAGCTGCACGACCGAGCGCTGCAGCGACAATCAGGTTCACTGCCAGGTACAGTGCGATCTTCAGCTTCAACAGCCCCAGGATCTTCAACAGAGCATTatgcaacagcagcagcaacagatGAACGTCAATATAACCGGAAATTCCAGCAACGATGGTGGAAAtcaaaacaattcgtcgaaaCCGGAAAAGGAAAAGGAAATGCGACAGCTCAGTATGGCGCAatttcAAGTTCCAGATTTAAAACCCGGAGGCCACATGATGGACGTGAGAACGGCCGATGGTTCGGTAGTTAAAATAAGCGCGGGCAACGAGCAAGATCTCGCTAAAACTTTGGGCGTTGAGATGGTTCAAAATATGTACAAGGTCAACGTCGAGGACATTAATCAACTTTTGGCTTATCACGAGGTATTCGGAAAGCTACAGAGCGAAATAGCCGCCGGAACGGTCGGTGGAACGGTTCCCACGCAAACCGTCACGACGATACAGAACGGCACACCGATAGTTCAACAAGTTCAATTGAacaaattcgatataaaaacaaGCGACGGCGAAGCTACACCGGGACCGAGCGCTTCACCCGTGTCCGTAGGCAGTCACGCTTGCGAAGTTTGcggaaaaatttttcaatttcgctaTCAGCTAATCGTTCATCGTCGTTATCACACCGAGCGCAAACCCTTCACGTGCCAGGTTTGCGGAAAGGCATTTACAAACTCGGACGATTTGACCCGTCACGGCAAGTGTCATCTCGGCGGCTCGATGTTCACGTGCGCGGTTTGCTTTCACGTATTCGCAAACGCTCCGTCGCTCGAGCGTCACATGAAACGTCACGCGACCGACAAACCGTACAATTGCACCGTTTGCGGAAAAAGTTTCGCTCGAAAAGAACATTTGGACAATCATACGCGATGCCACACCGGAGAAACCCCGTACAGATGTCAGTACTGCGCAAAGACGTTCACTCGCAAGGAACACATGGTGAATCACGTGCGCAAACACACCGGCGAGACTCCTCATCGTTGCGACATAtgcaaaaaaagttttaccCGTAAGGAACACTTTATGAATCACGTAATGTGGCACACCGGCGAGACCCCGCATCATTGCCAAGTCTGCGGTAAAAAATACACCCGCAAGGAACATCTGGCCAATCACATGCGTTCGCACACCAACGACACGCCTTTTCGCTGTGAGATTTGCGGTAAGTCGTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCACACCGGGGAGACTCCGCACCGCTGTGACTTCTGTTCGAAGACGTTTACGCGAAAGGAACATCTGTTGAATCACGTACGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACACACAGGCGAATCGCCGCACCGATGTCACTTCTGCTCAAAGTCGTTCACGCGCAAGGAACATTTGACGAATCACGTGAGAATTCACACCGGAGAATCGCCCCACAGGTGCGAGTTCTGTCAGAGAACGTTCACCCGGAAGGAACATCTCAACAATCATCTACGTCAGCACACCGGAGATTCGTCGCACTGTTGCAACGTTTGCAACAAACCTTTCACGAGAAAGGAACATCTCGTGAATCACATGCGCTGTCACACCGGCGAACGTCCATTCGTTTGCACCGAATGCGGCAAAAGTTTTCCGCTCAAGGGCAATCTTCTCTTCCACATGCGTTCCCACAACAAAGGTAGCAACGCCGAACGACCTTTTCGTTGCGATCTTTGTCCCAAAGATTTCATGTGCAAGGGCCATCTCGTGTCTCACCGACGTTCCCATTCGGACGAAAGACCCCACAGTTGTCCGGATTGTGGAAAAACATTCGTCGAAAAGGGCAACATGTTGCGACATTTGCGTAAACACGCGGCCGAAGGACCACCGACGCAAGTCGCGACACCCACGGCGATTTCACAATCCGGAGTTTTACCGATTCCCGCGGCCGCGGTTCTCGTCGGACATCCGCTCGCGCCACCGGCGCCTCCGGTGGTTCCTCAACACACGGTCGTTGTACCGACACCGCCGGGAGTTTTGGCGTCTTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVNSGRPSYPGSLASSGSVAQLGSAPHTSAEHLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHSSQRSASSSSAGEVIAKDSGSSSLSHEMALASGNHHPNTSSQHHHHHQSSVNAGSSAIPNSHHGSIQTSSQIPVSLPGLNLDGTHIPASHLQAAHAQMQQQMQSQQQQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQSHHRMQNHQNPQNNGPNPQNQNTQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSIMQQQQQQMNVNITGNSSNDGGNQNNSSKPEKEKEMRQLSMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNSDDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVATPTAISQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00841278;
80% Identity: -