Spul010940.1
Basic Information
- Insect
- Sussaba pulchella
- Gene Symbol
- lola
- Assembly
- GCA_963971145.1
- Location
- OZ020168.1:8055579-8063105[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-16 2.9e-13 49.7 0.0 2 42 421 462 420 475 0.95
Sequence Information
- Coding Sequence
- ATGTCCATGCAACAGTTTTGTCTGAGATGGAACAATCATCAACCAAACTTCATATCCGTATTCTCGTCGCTGCTCAACAATGAGACTCTGGTGGACGTGACGTTGGCGGCGGAAGGACGTCATCTTCAAGCCCACAAAGTCGTGCTTTCCGCGTGCAGCACGTACTTTCAATCGCTCTTCACCGTGAATCCTTGCCAACATCCCATAGTCATTCTCAAAGATGTCAAATTCTCCGATCTCAAGATCATGGTGGATTTCATGTATTACGGCGAAGTCAATGTTTCGCAGGATCAATTGCCCTCGATAATAAAGacgGCCGAGAGCTTGAAGATCAAGGGCTTGGCGGAGATGCATACGGCTTCTTTGACGAAGTGGCCAAGCGGGGCCAGCGAGCCGGGCGGGGGAGATCGCGGCGAGTCCTGTTCGCCGAGTCCATCGCCCTTATCGCCATCCTTTCGCCGAAAGCGTTTGCGCAAAACGTCAACCGGCTCGACGTCCGCGGGATCGGCCGATAAACCGgaggaaataaacgaaataacgcTCGTTGCCACGAATATCGTAAAACCCGAACCGCACATTGTGTCGCAAGAAAGCGGTGACAATATCAGACGTCCCATGAACACGACCACGGAATCACAAGGCAGCATCGACGAGGATCAAATATCTATCatgaGCAACATGGAAAGCAGCTCAGCAACGACACCCGCTCAGACCGAAGGATCTATGCAAGAAGTGAGTCAACAGCCCGGTGGAAATATAGGACAAAGTTCGCTCTCATCACAGCCACCGGCACATCATCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCCCGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGGTCCAAGCCTCGTCGGCGTTCACGACGCCCGAAATAACCGCAACATCGAGCATCAGCGAGCATCAGTACCAAACGGCCGGTGGTTCGAACACGACGACGGTGTCGAGTTGCGCCTTGTCGAGTTATCCGAACTCGTCCCACGGTCCGGTGCAACACGGGACGAATTCGAACGGCGGTGGTAACGGTAGCGTTAACGCGACCGGAAGTAACGGGGGTGGTAACGGGGGTGGTGGAACCGTCGGTGGTGGAGTAAACCCGAACAACGGTTCGAACAACAATCAAGGTGGTCCGTCGACGAATTCGACCCAATGTCCGAGCAATTGTCAAAGTCCATGCGCGAGTCCTCAAACaacgataaaaagaaaaagatcgaCGAATCCTCAAgccgatgaaaattttattcgagctCTCGAAGCCGTGCGTTACGGTGGAATTGGTTTTTGCAAAGCCGCGCGTATGTTCGGCGTTAACAATCGAACGTTGTGGTTGGAATATAAAAAACGCGGTTATCCGAACAATCGTCCGAGTTTGAAATCACGTGTCAAACAAGAAGTCAATTCGTCACCGCCACCCGCGACAAATTCGCAAACCGTTAATTCGCAGAGTCCAACGCCCATGGGACCACCGACGACGCCTCACAGCACGCACAATACACATCCCACTCACACGATGTTGACCGCTCACACGCCTCACACAATGCTTTCCGGTTACATAGACAGCAGACACACGGATTATTCGTTACCGAGCACCGCAATGCCGATCAATCTTCACGGGGTTAATTACAATTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGASEPGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSAGSADKPEEINEITLVATNIVKPEPHIVSQESGDNIRRPMNTTTESQGSIDEDQISIMSNMESSSATTPAQTEGSMQEVSQQPGGNIGQSSLSSQPPAHHQGLQWTIMEHTYPRFALSSCQTNLSVQASSAFTTPEITATSSISEHQYQTAGGSNTTTVSSCALSSYPNSSHGPVQHGTNSNGGGNGSVNATGSNGGGNGGGGTVGGGVNPNNGSNNNQGGPSTNSTQCPSNCQSPCASPQTTIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPATNSQTVNSQSPTPMGPPTTPHSTHNTHPTHTMLTAHTPHTMLSGYIDSRHTDYSLPSTAMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_01379388;
- 80% Identity
- iTF_01379388;