Svar006393.2
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- srp
- Assembly
- GCA_949127995.1
- Location
- OX421843.1:3147961-3163070[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-17 1.8e-13 50.2 3.7 1 34 1007 1039 1007 1041 0.97 2 2 3.7e-19 1e-15 57.5 3.7 1 36 1090 1124 1090 1124 0.97
Sequence Information
- Coding Sequence
- ATGAAGTTCCCCTCGCGAaacacgaaaacaacaacaacaacaccaacgacAGCGACGAGTAAGAAAGTGTCGCGAAGGGGTGCCGCGAATAAGGACAATAAAGACAAGGATAAAACACGCGCCACACCAACAAATTTGCTCACGAATgcagcaaaaatgaaaataacaaaagcgaTCGTCAACTCGAAATTGTCAACGGGGGCCAAATCATTGTCGAATTCCAAAGGAGCAGCAGCTCAAGGACTCCAAGCGTTACAGGCTCTGCAAggatatcaacaacaacaaagcggcAGTATGGTGGAGAGAACATACAGAGCGATTGAGGATCAATTGGAAAGCTCGAGTCGGTTGGATGAGGTGAAGGATGCAACAGGATCGACGACATCGTCCATGTTTGCAAATTTGACGTCGGCTATAagcgaacaacaacaggaacaacATGCAACAGGCTTTAAGAACCAACCAGCGGGCGAGGAGcaagcaaatgaaaacaatgCAGTAATGCGTCTGAAAGAGACAACAGAATGTTCACCACAAACGCAACcgcaaccaccaccaccaccaccaatgCCAGCACTAATACAAACAACAGCGCAGGCAACAAACTCAACACACTCGCACGATCAGCCGCAGGCAACCACCACCGCTTCGTCGTATCCGAAATTATCGTTGTCGTCCGGCAGAGCGACACCACAACTCATATCAGTTGTCAACGACACATCAAGCCAAACGGTGTTAcgcacaacagcagcagcgataTTAGTAGAAaatacagcagcagcagcatcagcagtaGCAACATTAGCCACAACAACCGAAGTCAAATTGAAGGAAGAACATTTCGTTGCAGACAATCTACGTTTGAGTGACGTCGTCAacactgccgccgccgccgatgacgacgacgacaacaacaacaataaatataaacaacgcGATAAAAGTTCGAAAAGTGATAAGTGTAAAAATGCGATTAGTAATGCAACAATTGTGCCGGCtgtaacaacagcaacaatatcagtgataaacaataaaaataaaaacaatacttTTGAGAGCGGTGAAAagttgccaacaacaacaacaacgacttcATCGAGTGTAGTAGGAGTTTTAGAAAGTGCCGAAATCAATGaacaacataataaatatcaGCAACAGTTAagtgaacaacaacagcaacatcagcaacaattgGCAAGTGAAGTTTTGCCTAGCAATTATCGCGGTCTAAATAATTCCGTTATAATTGCGAATTTTAGTaatccacaacaacaaacaggtTTATTGTATCAGCAACATAACGAAGCGGCAGCAACTCGAAGTgcgccaacaacaaacgaaacatttttgcGCTACAATCAGtctgagcaacaacaacagcatcaattGCCAGAACACGAACAGTTGTCCAGTGCCGACGaggaacaacagcaacagttgctcAGCGCACAACACATTCTCAACAGCAATACTGATCCAAATCTTAATTTAGCTGTTGCCGACataacacaacagcaacagcatcagcaacaaaaCTGGCTAGCAACATACAACAGTTGCGCCTATGATCTGTCATTGCATCATcatcaccagcaacaacagcaacaacaacagcagcagcaacaaaaagagCTTGCATTGCACCACCAGCAACATTTGCTCTTAACCAGTcatcaacaacaccagcagcaacatcaacagcaaatAAACGCGCTGCCGCCCCAATACACCCACGTCCACCATCAGCCTCCTCCACCTACATCCAGCACCACGTTCGAGGACAACATCATGCGTAATCAATTTACACTGTATTACGGCACTGGTGTCGGCAATCCACACGAACATctgcaacaacatcatcaccatcatcacCACGGCAGCAGCTCTGCTGCGCACACGCCCACCAGCATCGACGATCTCGTGCAGGACACGCTTAAGGACGAATGCCTCGACGATCATCATGCGGGCGTCAGTTACTACACGCTGACAGCGGTTACCGATCTGCAATCACTCAAGGATTCGTTTCATCATCAACAGAATCTGGCTGCGCACGAGCATCAtctgctgcagcagcaacaacagcaacagcaacaccaacaacagcagcagcagtcacagccacaacaacaacgacaacagccgCACCACGTCCACATTCATCACACGCACAATAATTCGGCCAGTTCCGGCGGTGAATCGCCGTCACCCTCGTCGGCGTTGTCGCATGTCGGCGGTGCCGCTGGTGATATGACAACCCTGCAGAGCTTCACCCAGTTGACGAACGCCACCACGCATCGAGATATTTATGGCAATTTGACGCCGGAACATACGCCACTGTCGTATTTCTCATCGTCGCTGAGTCCGGTGCTTTCAAGCAGTTCAGTCTATGCTGGACCTTTGCTCACTTCGGCTGCCAATGGTATGCAGTATGGAATGCAATCCTCCGCCTCTGTCGCAGCATCATCGCCGCAACATCACTCCGGCGCCGTCGTCGCTGCCGCCGCAGCCAGCACACCGACACAAGTCGCCACTGCGGctgcagtagcagcagcaacgggCGCTGTTAGCGGTGGCGTTGGTTCCGGTTCAAATTCCATCAGCAACGATGACAACTACGGCTCGCCCAAGtccaataacagcaacaatggTGGTGCGCTGCCTGCCTTTCAACGCAGTTACGGCAGCGTAGCGAATCCAGCGGCAAGTGGTGCAGCAATCGGTGGCGCCGAACGTTACACACCGTTGACAAATTACAGAAGTCATAACGACACTTGGCCTGGTCATTACGATGCAATTAGCTACGCTCCCACTTCGGTGGTGACAAGTCAAGCGCTGAACGGTGCGCTTGCTACGGGCAATACAAACGTGATACGCAGTTTGAACGGACGCACTGCGTCCACGACGGCGACGGCCGAAGGCGCTTTAACGCCCACGAGCTTGGGCGCACACTTGTCAGCATCGGCTTCGCTAACTGCAACATTTTTCGATGCGGATTTTTTCACTGAGGGGCGAGAATGTGTGAATTGTGGAGCGATTTCAACTCCCTTGTGGCGCCGCGATAATACCGGACATTATCTGTGCAATGCGTGCGGTCTATATCATAAAATGAACGGAATGAATCTGGCCGCTGAACAAGGCGGGGATTTCTATAAGAACTACATTCCGTATAGTGTGCCCAGTCGGACGGCAACCGCAACTACCGAGGAGCACGTTAGTCGCTCAAGTTCGCGCAGATTGAGTGCCTCCAGACGCGCCGGTCTTTCCTGCTCGAACTGTCTAACATCGCAGACCTCGCTGTGGCGCCGAAATCCTAACGGCGAACCGGTTTGCAACGCATGCGGACTGTACTACAAGTTGCACAGTGTAAAGCGGCCGCTGACCATGAAGAAGGACACGATTCAGACACGTAAACGCAAACCGAAGGGCACCAAAGCTGAAAAAGCATTAAAGAAtgcacacaacaacagcaacaacaacaacaatagcaacaacgtCAACAACAGCCTCAGCAATGGTGGAGTTATTTCCACACTCACCGATCCAACTAATGCGGCCAGCTCGCCAAGGAATAGCAATCCATCACCAACGCCGTCTCATAATATCCAAGCAGGAGCGACAGCAACAATGCTCAGTGTGTCACCGACATCACCGCTTGCAACACagctacagcaacaacaacagcagcagcaccaaatGGGCAATGCATCGCCAATTGAACAGCAACATTTCCAACAAATATCACCAATGCATCATTTACAATCACCAATAATGTTCTCATCCGCTTCACCAACGCATAATGGtcatttaataaacaacaacaataacaataacaacacatttaataacaacaataataacattaataataataataacaacaacaacaacaatacaaataattacaacaaatttaagcttGTGCAGGAATATCTGCAGTCGCACCAACTTCACCAACACGAGACATCGACAGCgacgcaacagcaacagcaacagcagcaacaacaacaattgttggCACAACAACTTATTCACCTGCTGCCTTCGCCCTCCTCACCGCCAACGACGACGTTTTGTCCaccatcgacaacaacaaccgcagcGACAACATCATTGTcttcagcagcaacaacacccaCTGTGAGCCAGCAACATCACCACCTACATCAATtccagcaacaattgcaacagcAGAACCAACAACATGGTCACCAACAAGTGCATTTGCCTGACGACAGCCCCTACCACGCCCATTCATCGCTTTCACACCATCACACGTCGCCCGGGCCCGTATCGCCCGCCTATTCGCATTACGGCGATTTGTTGCCCAACGAGGAGGAGTCCATAAAAATCGAACAActgcatcatcatcagcaacaacatcaacaacagcatcatctgcaacaacaacaacaacaattgctgcaGCAACATGCTGCAATGAGTCGCAGCTCATCGATGGACGACGAATACGAGTCGtttcaacaacagcaattgcatcagcaacaacaacaacaacaacaacaacagcatcaactgttgcaacaacaacaacagcagcaacaacaacaaagcttCCAGTTGCACGCCGTTGCCGAACAACATTTAAAGGAGCTCGGTTGCAAATTCGAGCGCAACACTGTTGTAAAAACAGAATAA
- Protein Sequence
- MKFPSRNTKTTTTTPTTATSKKVSRRGAANKDNKDKDKTRATPTNLLTNAAKMKITKAIVNSKLSTGAKSLSNSKGAAAQGLQALQALQGYQQQQSGSMVERTYRAIEDQLESSSRLDEVKDATGSTTSSMFANLTSAISEQQQEQHATGFKNQPAGEEQANENNAVMRLKETTECSPQTQPQPPPPPPMPALIQTTAQATNSTHSHDQPQATTTASSYPKLSLSSGRATPQLISVVNDTSSQTVLRTTAAAILVENTAAAASAVATLATTTEVKLKEEHFVADNLRLSDVVNTAAAADDDDDNNNNKYKQRDKSSKSDKCKNAISNATIVPAVTTATISVINNKNKNNTFESGEKLPTTTTTTSSSVVGVLESAEINEQHNKYQQQLSEQQQQHQQQLASEVLPSNYRGLNNSVIIANFSNPQQQTGLLYQQHNEAAATRSAPTTNETFLRYNQSEQQQQHQLPEHEQLSSADEEQQQQLLSAQHILNSNTDPNLNLAVADITQQQQHQQQNWLATYNSCAYDLSLHHHHQQQQQQQQQQQQKELALHHQQHLLLTSHQQHQQQHQQQINALPPQYTHVHHQPPPPTSSTTFEDNIMRNQFTLYYGTGVGNPHEHLQQHHHHHHHGSSSAAHTPTSIDDLVQDTLKDECLDDHHAGVSYYTLTAVTDLQSLKDSFHHQQNLAAHEHHLLQQQQQQQQHQQQQQQSQPQQQRQQPHHVHIHHTHNNSASSGGESPSPSSALSHVGGAAGDMTTLQSFTQLTNATTHRDIYGNLTPEHTPLSYFSSSLSPVLSSSSVYAGPLLTSAANGMQYGMQSSASVAASSPQHHSGAVVAAAAASTPTQVATAAAVAAATGAVSGGVGSGSNSISNDDNYGSPKSNNSNNGGALPAFQRSYGSVANPAASGAAIGGAERYTPLTNYRSHNDTWPGHYDAISYAPTSVVTSQALNGALATGNTNVIRSLNGRTASTTATAEGALTPTSLGAHLSASASLTATFFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNLAAEQGGDFYKNYIPYSVPSRTATATTEEHVSRSSSRRLSASRRAGLSCSNCLTSQTSLWRRNPNGEPVCNACGLYYKLHSVKRPLTMKKDTIQTRKRKPKGTKAEKALKNAHNNSNNNNNSNNVNNSLSNGGVISTLTDPTNAASSPRNSNPSPTPSHNIQAGATATMLSVSPTSPLATQLQQQQQQQHQMGNASPIEQQHFQQISPMHHLQSPIMFSSASPTHNGHLINNNNNNNNTFNNNNNNINNNNNNNNNNTNNYNKFKLVQEYLQSHQLHQHETSTATQQQQQQQQQQQLLAQQLIHLLPSPSSPPTTTFCPPSTTTTAATTSLSSAATTPTVSQQHHHLHQFQQQLQQQNQQHGHQQVHLPDDSPYHAHSSLSHHHTSPGPVSPAYSHYGDLLPNEEESIKIEQLHHHQQQHQQQHHLQQQQQQLLQQHAAMSRSSSMDDEYESFQQQQLHQQQQQQQQQQHQLLQQQQQQQQQQSFQLHAVAEQHLKELGCKFERNTVVKTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -