Basic Information

Insect: Suillia variegata
Gene Symbol: -
Assembly: GCA_949127995.1
Location: OX421843.1:18595697-18616096[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.03 2.2 9.4 0.3 1 23 1991 2014 1991 2014 0.90

2 8 0.068 4.8 8.3 4.8 1 23 2019 2042 2019 2042 0.97

3 8 0.28 20 6.3 2.5 1 23 2237 2260 2237 2260 0.93

4 8 1.5e-05 0.0011 19.7 0.8 1 23 2268 2290 2268 2290 0.98

5 8 0.00011 0.0082 17.0 0.8 1 23 2297 2320 2297 2320 0.97

6 8 4.9e-05 0.0035 18.1 1.3 1 23 2326 2348 2326 2348 0.96

7 8 0.0018 0.13 13.2 2.0 2 23 2354 2375 2353 2375 0.97

8 8 0.49 35 5.5 2.4 1 23 2381 2403 2381 2403 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.03	2.2	9.4	0.3	1	23	1991	2014	1991	2014	0.90
2	8	0.068	4.8	8.3	4.8	1	23	2019	2042	2019	2042	0.97
3	8	0.28	20	6.3	2.5	1	23	2237	2260	2237	2260	0.93
4	8	1.5e-05	0.0011	19.7	0.8	1	23	2268	2290	2268	2290	0.98
5	8	0.00011	0.0082	17.0	0.8	1	23	2297	2320	2297	2320	0.97
6	8	4.9e-05	0.0035	18.1	1.3	1	23	2326	2348	2326	2348	0.96
7	8	0.0018	0.13	13.2	2.0	2	23	2354	2375	2353	2375	0.97
8	8	0.49	35	5.5	2.4	1	23	2381	2403	2381	2403	0.99

Sequence Information

Coding Sequence: atgaatgtcGAAATTGAATCGTCGACACTGCCAccaccgtcgtcgtcgtcattggTCACGCTGGATGACGACGTTCCTTCCACATCCAGTGCGGCGGCACTTTTATCCGCTGCAGTTtcagccgctgctgctgctgccgccgccaacACCACCGCTTCACAATTGAGCAACGCATCTAGCTGGGAGCTTAATATGCTGGACTTGTGTCGCAATTGCGGCAAAGTCAATGACGAGCTCTATGATCTCTATACAATTGGTGGCGGTCCTACTGTCGATATAGACTTGGAAGGGGGAGACACAAGTGTTAATGCCACCGCCTCCTCTAtcattacaaattcaaaaacggACTGCAGCGACGCCGCCGCCTCTGTACAGCAGCAGCCACACCTCAACATCGATTGTAGCGATGCCGACGGCAACGCCAACAACACCCTGAACAGCTCTGGATCGCCGCAGAGCGTTGACATGGAGGGCATTATAgaagaaatgcaaatttgGAAATTGCGGATAAAACCGAATGACGGGCTACCACAACGCATTTGCCTCAAATGCTTTAAACAATACTCGCTGATACACAAGTTTCGACGCAAATGCCTTAAAGTGCAAATACGGTTGCGTTCGCTTTATGAGGAACGACGCCTGGAGGAGCAACAACTGCTGCTACACAAACAGGATGCAACACCACTACACTTGCCACCAGAGCTCGATATAAGCAATGATTTAATAAACGATAACTACGGACAGCCGTTGTCGGAGGTTGAACTTTTTGAAAGTGCATGGAATGCATCGGATGCACCGTTGCTGGACAGTGATGCATCAAAGGCGGAAATTACAGTAGTTGTGGGCGGTGGCGGCAGcagtgacgacgacgacaatgaaAAAGATGGTGAAGGTAGCAATGTCAACGACGATAATGTTGCAATTGAATTGGAAGATACGACGAAAGTCGTCAGCGATTTTGATGTGGCGCGATGTTTGAATGACAGTATGGATCTGACCGTCAAATCGAATATTGATGAGGAGTCGCTACTCGATGCGAATAGTATTTTTAAGTCAGCCGATACAGTGATCGTCGATGTAACAGAGTCTAGTGAAGCGCCTGAAAAGATAATGCAATCCGAAGATGAGCCATCGATAGATAAATCATCGGACAAATTGTTGCATGTGTCagaattgaaaacaaatgaCGACGTGCAATCAAAATACGATTTCTTTGAAGAAAACGCCGTGTATACAATTATTAAGCAAGACAGCGAAAAAGTGGCCGTCATAGCGACTGATTGTTCTGAAGAAATTCCTAAAAGTAAAGACGCAGATTTGGTGATTCTAGACAATTCAGATAAATTGACGCTATCAACAACGCAAATTACCGACGAAACAAGTTTGTTGTGTAAAGGAAATAATAACAGCAGCGTAAATAATGCggtagttaaaaataaagatgACGATAATGCCGATGTTGAAGGTCAAATTAAGGTAAATACAAATATCAATGAGCCGAAGAAAGAATTCCCGCAAAGCTATGATGGCAACGACAAACTTGTCACACAAATAACCGACAGACTAAAGGAAGCGTCGACAACAGAAGTACACAAAACTGTCGATGAGATTACTGAGGTGGAACGTCAAACACCTGAAAatgataaacttaaaatagagATAGAACTGGCAACAGTAACGACTGGAGAATCAGAAAGTAAACTCAACGACACAAAAACGTTAGAtagcaacatcatcatcgaGAACAACGATAGCAAACAAAAAGCCATAGAATCAACGGAAATCACATTGGTTACCAAGGCCGCTCTTAAAGAATATGCCACACCTCCGCCAAATACCGATGAGAATACTCCAAATCCGTCGAAAAATGACAAATACGAGCAGCATCAATTcgaagaaatgaaaaattcacgCTCGAATACGATTACTACAAGTGACGTTGCTGAGAATCCTCAGCAGGCGATGTCACAGCTTGAGGTTATTGCTACGTCATCGGCGGCGACATTGCCGACAACGGCAGACATTTGTAATACATTTAATGCGCCAACAAATCCCACTTCAAgtgaaaatatcgaaatacaTCAAAACACCAATCAAAGCAAAGCGGAAGCAATTGCGAAGGCGACGGAACGTGGAAAAAAGTTGCGCTGCAAACCAAAGGGCAAACTTAAGTGTTGCGATAAAAAACGTGTTGTAAGCGTGTCTGGTGTGAGACCGCAAGTGCGAGCATGCTATGTACGTTTGCGACGATTGCGGGtggacaaaacaaaagactacATACTCCACCTAGGTAAAACTTCGACCATGCCGAAATCGTCATCGTCGACACGCGATAATGAAAGTGAACTTGCCGCAGCGGCAATAAGTCatgaattgaaaagaaaagctCACAATGAAACGACGGTCGATAATGTTTTCGAGAACAAAGAAAGAATAGCAAGACAAAGGAAACAAATTAACGATAAAGAAGGTGGCGGCAATACGAAAACTAGcaaaaaacgtaaatttttaatgttggaAAGTGAAGATGCGTCGGTGAGAAAGTCTCCATGGAAGACTAAGGCCGAGATGAAAGCAAATGTGGAGAGCGACAATAAAAAGGCATTACCATCGTCTTCATCGTCGccaaaattaactttatgCAGCACACGTTCCAAAACAGAAAGTGATAATAATTCCAAGTTGGTTGTTGTCAAGGTTGACTTTGACGCAACAAGCGAAACTGTTGCGGAAATGTTGACTGAAGATATTGCGAAAAGTACTTCTGTTCAAGAAACATCAACTGATGAAAGTCACGATTTGACTGACACAAAAACAGTGGACAAAGAAACACAAAGTGTTGGAGGTCAAACCGCCGTACACGATTCCAACTTATCCAACGAACAAATTAAAGCACACGAACCGACAACAAGTGCACAAAATGTCCAACAAATAACTACCAATGTGATcactaataataatagtacTAAGCCATCAACTGAAATCGAAGAAAATTGTGATAGCGATAAAATAGCTACCATACAAACAATAGAATCagaaacatcaacatcaacaatgcCAATGCAAAGCGTcccacagcagcaacagcaacagcagccaaCCACCAAAAACGAATCTCCATCAAAAGAGCTTCCAAAGGAGTTAATCATACGTGTTCCACTCTCAGTTTTAACAGAAGAATTTcagaaattacattttaataaaatatcaactaCATCGAGACCGTTAAACGATCAAGATTCCGTTGCCGTAGCCACAACTAGTAACAGCTGCTCTACGAGTAGATCTGGACAGAGCGCTTCTACTATGTCGGCAGAGTCGCCATCGATTTCGTCATCGACTGCAAAACCAATGTCAGatgaaaatttttgcataagtGCTGCAGCAGATTGCTCTGATGCTGCTGGAGCACTCAATGCAACAGCGAACAGAGCAACACAACCTTATGCAACGTCGTCATCCCAAACAAACAGCGAAGTAGAGCCGGAAACCGATACcgaaatacaattaaattccaGTCAGTACGACAGCGAAGAACAGAGTGAATTTAATGGTTTTACAGCCGAAAGTGATGTCAGTGATGTTCTCAATACCAGTGCCGAGTCGATCGGTAGTCAGCAATCGATACAAGAGGAACGCTCAAGCGAGGTAGCACAAACACACTACAATCACAACGCCTGTACTAGTAGCAACATAAACAActgcagcagtagcaacacgAATAAACCCTATTCcaaaataaacgattttataAATGACTTCCAAACACACTGCCTCGAAGCGTCTGAgtatgacgatgatgacgacaaCGATCCATCAAGTTATGATGCGGCACCCTTGGTGGACGACGGCGTTGAATATCACCAACAGCACCAGCTCTCTCCCGAAGTCGAACTAAGCGAAATTACTTTGCCGCATAACAGCGTTACAACGCCACCACCACTGTTGAGCGCCTCAAATCTTAGCGAAATGAATGACGTTGAGACAACATTGAATGGCATTCTTAATGAAATGCAGGATCAGCACATTTACACACCAGTTTCTTCACACACTGATGACTTCTTCAGTCAATCTGTCTATTCGCCCCTCTCCGATACGCCGGAAACGCCAACACACAGCATGTATGCCGACAGCCCCGGTGGCGGAGCGGTCGGTGGCTATATATCGGTAGAAACCAGTCCGTATGTACAacaccaccacaacaacaaccagccacaaaatcaacaattagATATTGTCCCAACAGATGCCAGTGCGTTTCCCGATTTTCCCAATTACGTTGGCGATTGTTTTACCGAGGATAGCACACAATCCGAACTAATTGGCTTCCAAAACGATATACCCTGTTTCGAAAATATCGAACTGGTAACGGCAGCATCTGCGGGTTCCTCTTCGAGTGCATCGAATACGCCAACGCATTATCAAACGCAAACTGTGCCATTGCCAACAAACACGAATAGCGCACTGCAAGGTACGTTGCCAGCCGCAAAAACAATTgtcgatgctgctgctgctgctgctgttgactCAAATGTGCAATATCTGGACATGTCCGTACAACAGGATAATGCGGAAGTTAGTGCTGCTCTGGGCGATGTCTTAGGGCTGGTATGTAGCGGTGGCAATGGTGTTCAAGTGCATGCACCAACCTTTACAACatcgacagcagcagcgggGACTGCGAATATGACACCAGGCGTATCAATTGCTGGCCAAACTACAACAATGCAAATTCTCGGGGCCGGAGTCGATAAACAATACGTGTCGGATACAGCCACAATACATTTAAATCAGTTTCTAAACGatctccaacaacaacaacaacagcagcagcaacaacaacaacaactcgtaCTTCAAGTCAGCAATGAGTCGTCTGCTGCTGGCACAACCGCATTTATACGCACCAATCAAATCATGTCTGCTTCATCAGTCGCACAACGTCATAACTCAAACCAAgcgattttttcgaaaatcactCAAAGACCGTTAACGCAGACGACAATGTCGCACGAGGAAATTCacagcggcggtggcggcaaaGTTCAGTTTATAACGCTCGGTCAAGGAACAGCTCTTGCCGATTTCAAcgcacaacagcaacaacaacatcagcgacAAGACGTCATCATCGGCGGCAGGCAAATGAACGCTATGAATCTCTATGCTGCCCACCATAACAACGCCAATGTGCCTACTCAGGAAATACAATGGACAACGACGTCCATGGGCGGCACTTCGATTAGCGGTGCCGGCATTGCATCAACGGCAGCGCTCGCCACCGAACAAACCACAACGTACTACATCAATGCCGCCGATCTTTATCAATCGGATTTAATCAGTAGCTCACATGCTACTGGTGCTGGCGGCACTTTAACGACTTTAACTAACGTCGCAacacaacatcaacagcagcaccagcaccaacaccaacaaacagTAGCCACCGCAGAGTTGCTGGATAAACAATCAATGGACGCCAATGAGAACTACATTGAGGGCATGCAAAATCAACCCGTCATGATTATCATACCACATGAATATATACGCGATGCTTCCACGCCTGTTGCCGCCACAAATACGTCACAAGTGTTTGGCACCAACCAGCAGGAGCTCGGCACATTTACGCTCACACAAACCACTACTCAGCCACAAACAGTATTAGTacagaccaacaacaacaatagaaacaacagtaacaacacgACGATCAATAGTCCGAGCAATGTTACAACGCATTTCATTGCCACGCCCGTGTCGTCACCACAACGTCCCGCCGCCATAAGCTCGCCACAACAAACCCAAACGCCGCGACAACATCTGCAGcagtcgtcgtcttcgtcgacGTCGTCAACGTCACCAGAACAAAGAGTCAATCTCATGTGCCGCTTCTGTCACAAACGTCAGAAATTCACCAACAATCTCGATTATAGCAATCACATTATTGCCACGCATCCCGCCGAGCAACCCTACAATTGTCCATACTGCCCAATCAACTTTACGAAACGCGTCAAGCGCCAACAACATATTGTCGAGGAGCATGGCCCGCATCGTTTCCAGTGCGCTCATTGTGGTCAGAGTTTTTGTGCACAGCGAACGTTCGATTTGCATTTGCAGCGCTATCATGCACTCGAATCACCAACgccgcagcaacaacagcaacaacagcagcatcagcgTTACGTGCGTCATGCAACGTCgcgcagcggcagcagctcCGCCGCATCTTGGCAACTTGATCAGTCACCGCTGGTGCGTGTGGAGGATGTGCATCTGCATGTCAGCGAAATGGAAGGCAAAGGCAAACGCgCTATTGATCTGCAGCTTGACGGCAGTCATTTGTCAACGGAACCTTCGACCAGCACGCAAACTGCCAATAAGCCTCAACGCATACTTTGCTGTCCAGATTGTGATGACTCTTTTGATGATCCAACCAATCCGGAGGGACACAACCACTCCCACGCCGCCCatcatatacacacacaacaacaacagcaacaacccgCCCATGTAACCATGCCATCGCCCGAACAAACGGAACCAGATTCGACGTCGACAACAACATTGCGACACTTTCGCAAACGACGGGTGTCGGCATCGAAAATGGCAGCAGCCGCAGCTGCTGCTGAAGTCTCTAAAGATTCTAATGATGCTGCCTCCGCTGCTGCAGTAGATCAACTTGTAGCTGAGCGTGTGCTGCGCAGCAGTCACAATTGTCTCTTCTGCGAGGAGCGCTACACCAACGAAATAGCACTGCGGAAACACCATCAGCTGGCGCACGGCAATCAGGCGTCGATGCCGTTCGTTTGTTCAATTTGTAAGCGCGGTTTTCGCATGCGTACTGCGCTGCAGCGACACATGGAGACGCACGATGCCGAAGGTCGGCCGTACGAGTGTAGCTGGTGTCATGTACGCTTTCCGCGTCCCTCGCAACTGACGCTGCACAAGTTGACGGTGCATTTTCTAAAGAAGCCGCACTCATGTGAAGAGTGTGGCAAACAATTCGGCACCGAATCGGCGCTTAAAACGCATATTAAATTCCATGGAGAACCAAGCATTCAATGCGACCTTTGCAGCCGAAAGTTTTTCCTCCAGAAAGACTTGCGCAAACACCGGCGCATTCACACCGGTGAACGGTTTTACAAATGCGATCTCTGTCCCAGTACATTTTTGCACTATACGCGATTgattgcgCACACAAAGACCCATTTACCGTTGGGAATGTACTTGGAGGAAACTGCGCCCATACTAAATACAGCAACAGCACCAGAGTCGAAAGATGAGGaggacgacgatgacgacgaggAGGAGGAGAATATAGCAGATGAGGAAATCCCAGTAGCAGAAACACAGCAAACGATTAATAAAACGCCACAAGCGATCGCCACAATGGACTCACCATAA
Protein Sequence: MNVEIESSTLPPPSSSSLVTLDDDVPSTSSAAALLSAAVSAAAAAAAANTTASQLSNASSWELNMLDLCRNCGKVNDELYDLYTIGGGPTVDIDLEGGDTSVNATASSIITNSKTDCSDAAASVQQQPHLNIDCSDADGNANNTLNSSGSPQSVDMEGIIEEMQIWKLRIKPNDGLPQRICLKCFKQYSLIHKFRRKCLKVQIRLRSLYEERRLEEQQLLLHKQDATPLHLPPELDISNDLINDNYGQPLSEVELFESAWNASDAPLLDSDASKAEITVVVGGGGSSDDDDNEKDGEGSNVNDDNVAIELEDTTKVVSDFDVARCLNDSMDLTVKSNIDEESLLDANSIFKSADTVIVDVTESSEAPEKIMQSEDEPSIDKSSDKLLHVSELKTNDDVQSKYDFFEENAVYTIIKQDSEKVAVIATDCSEEIPKSKDADLVILDNSDKLTLSTTQITDETSLLCKGNNNSSVNNAVVKNKDDDNADVEGQIKVNTNINEPKKEFPQSYDGNDKLVTQITDRLKEASTTEVHKTVDEITEVERQTPENDKLKIEIELATVTTGESESKLNDTKTLDSNIIIENNDSKQKAIESTEITLVTKAALKEYATPPPNTDENTPNPSKNDKYEQHQFEEMKNSRSNTITTSDVAENPQQAMSQLEVIATSSAATLPTTADICNTFNAPTNPTSSENIEIHQNTNQSKAEAIAKATERGKKLRCKPKGKLKCCDKKRVVSVSGVRPQVRACYVRLRRLRVDKTKDYILHLGKTSTMPKSSSSTRDNESELAAAAISHELKRKAHNETTVDNVFENKERIARQRKQINDKEGGGNTKTSKKRKFLMLESEDASVRKSPWKTKAEMKANVESDNKKALPSSSSSPKLTLCSTRSKTESDNNSKLVVVKVDFDATSETVAEMLTEDIAKSTSVQETSTDESHDLTDTKTVDKETQSVGGQTAVHDSNLSNEQIKAHEPTTSAQNVQQITTNVITNNNSTKPSTEIEENCDSDKIATIQTIESETSTSTMPMQSVPQQQQQQQPTTKNESPSKELPKELIIRVPLSVLTEEFQKLHFNKISTTSRPLNDQDSVAVATTSNSCSTSRSGQSASTMSAESPSISSSTAKPMSDENFCISAAADCSDAAGALNATANRATQPYATSSSQTNSEVEPETDTEIQLNSSQYDSEEQSEFNGFTAESDVSDVLNTSAESIGSQQSIQEERSSEVAQTHYNHNACTSSNINNCSSSNTNKPYSKINDFINDFQTHCLEASEYDDDDDNDPSSYDAAPLVDDGVEYHQQHQLSPEVELSEITLPHNSVTTPPPLLSASNLSEMNDVETTLNGILNEMQDQHIYTPVSSHTDDFFSQSVYSPLSDTPETPTHSMYADSPGGGAVGGYISVETSPYVQHHHNNNQPQNQQLDIVPTDASAFPDFPNYVGDCFTEDSTQSELIGFQNDIPCFENIELVTAASAGSSSSASNTPTHYQTQTVPLPTNTNSALQGTLPAAKTIVDAAAAAAVDSNVQYLDMSVQQDNAEVSAALGDVLGLVCSGGNGVQVHAPTFTTSTAAAGTANMTPGVSIAGQTTTMQILGAGVDKQYVSDTATIHLNQFLNDLQQQQQQQQQQQQQLVLQVSNESSAAGTTAFIRTNQIMSASSVAQRHNSNQAIFSKITQRPLTQTTMSHEEIHSGGGGKVQFITLGQGTALADFNAQQQQQHQRQDVIIGGRQMNAMNLYAAHHNNANVPTQEIQWTTTSMGGTSISGAGIASTAALATEQTTTYYINAADLYQSDLISSSHATGAGGTLTTLTNVATQHQQQHQHQHQQTVATAELLDKQSMDANENYIEGMQNQPVMIIIPHEYIRDASTPVAATNTSQVFGTNQQELGTFTLTQTTTQPQTVLVQTNNNNRNNSNNTTINSPSNVTTHFIATPVSSPQRPAAISSPQQTQTPRQHLQQSSSSSTSSTSPEQRVNLMCRFCHKRQKFTNNLDYSNHIIATHPAEQPYNCPYCPINFTKRVKRQQHIVEEHGPHRFQCAHCGQSFCAQRTFDLHLQRYHALESPTPQQQQQQQQHQRYVRHATSRSGSSSAASWQLDQSPLVRVEDVHLHVSEMEGKGKRAIDLQLDGSHLSTEPSTSTQTANKPQRILCCPDCDDSFDDPTNPEGHNHSHAAHHIHTQQQQQQPAHVTMPSPEQTEPDSTSTTTLRHFRKRRVSASKMAAAAAAAEVSKDSNDAASAAAVDQLVAERVLRSSHNCLFCEERYTNEIALRKHHQLAHGNQASMPFVCSICKRGFRMRTALQRHMETHDAEGRPYECSWCHVRFPRPSQLTLHKLTVHFLKKPHSCEECGKQFGTESALKTHIKFHGEPSIQCDLCSRKFFLQKDLRKHRRIHTGERFYKCDLCPSTFLHYTRLIAHTKTHLPLGMYLEETAPILNTATAPESKDEEDDDDDEEEENIADEEIPVAETQQTINKTPQAIATMDSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -